RNA–Protein interactions for RNA: ENST00000612199.4

SRGAP2B-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRGAP2B, Length 7,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-204ENST00000612199 TRGV1A0A0A0MS02 117 aa8□□□□□ -1.13
SRGAP2B-204ENST00000612199 HSPB1P04792 205 aaKnown RBP8□□□□□ -1.13
SRGAP2B-204ENST00000612199 H2BFSP57053 126 aa8□□□□□ -1.13
SRGAP2B-204ENST00000612199 MPLKIPQ8TAP9 179 aa8□□□□□ -1.13
SRGAP2B-204ENST00000612199 ZNF837Q96EG3 531 aaPredicted RBP8□□□□□ -1.13
SRGAP2B-204ENST00000612199 DLL3Q9NYJ7 618 aa8□□□□□ -1.13
SRGAP2B-204ENST00000612199 LINC00527Q9UJ94 153 aa8□□□□□ -1.13
SRGAP2B-204ENST00000612199 C1QL1O75973 258 aa8□□□□□ -1.13
SRGAP2B-204ENST00000612199 IGLV3-19P01714 112 aa8□□□□□ -1.13
SRGAP2B-204ENST00000612199 ZNF880Q6PDB4 577 aa8□□□□□ -1.13
SRGAP2B-204ENST00000612199 BIVMQ86UB2 503 aa8□□□□□ -1.13
SRGAP2B-204ENST00000612199 C8orf31Q8N9H6 132 aa8□□□□□ -1.13
SRGAP2B-204ENST00000612199 KLF14Q8TD94 323 aaPredicted RBP8□□□□□ -1.13
SRGAP2B-204ENST00000612199 IGKV1OR2-108A0A075B7D4 117 aa8□□□□□ -1.13
SRGAP2B-204ENST00000612199 ERVH48-1M5A8F1 160 aa8□□□□□ -1.13
SRGAP2B-204ENST00000612199 HYPMO75409 117 aa8□□□□□ -1.13
SRGAP2B-204ENST00000612199 IER3P46695 156 aa8□□□□□ -1.13
SRGAP2B-204ENST00000612199 TMEM105Q8N8V8 129 aa8□□□□□ -1.13
SRGAP2B-204ENST00000612199 C5orf66Q9H5L9 145 aa8□□□□□ -1.13
SRGAP2B-204ENST00000612199 SNAI2O43623 268 aa8□□□□□ -1.13
SRGAP2B-204ENST00000612199 IFITM2Q01629 132 aa8□□□□□ -1.13
SRGAP2B-204ENST00000612199 FXYD3Q14802 87 aa8□□□□□ -1.13
SRGAP2B-204ENST00000612199 CLPSL2Q6UWE3 100 aa8□□□□□ -1.13
SRGAP2B-204ENST00000612199 OR11H4Q8NGC9 324 aa8□□□□□ -1.13
SRGAP2B-204ENST00000612199 OR5P3Q8WZ94 311 aa8□□□□□ -1.13
SRGAP2B-204ENST00000612199 SDHCQ99643 169 aaPredicted RBP8□□□□□ -1.13
SRGAP2B-204ENST00000612199 SDF2L1Q9HCN8 221 aa8□□□□□ -1.13
SRGAP2B-204ENST00000612199 PGLYRP1O75594 196 aaPredicted RBP8□□□□□ -1.13
SRGAP2B-204ENST00000612199 DAD1P61803 113 aa8□□□□□ -1.13
SRGAP2B-204ENST00000612199 PUSL1Q8N0Z8 303 aaKnown RBP8□□□□□ -1.13
SRGAP2B-204ENST00000612199 SPATA25Q9BR10 227 aa8□□□□□ -1.13
SRGAP2B-204ENST00000612199 ANAPC13Q9BS18 74 aa8□□□□□ -1.13
SRGAP2B-204ENST00000612199 TRAV12-2A0A075B6T6 113 aa7.99□□□□□ -1.13
SRGAP2B-204ENST00000612199 FAM3BP58499 235 aaPredicted RBP7.99□□□□□ -1.13
SRGAP2B-204ENST00000612199 RPL18AQ02543 176 aaKnown RBP7.99□□□□□ -1.13
SRGAP2B-204ENST00000612199 CYB561D1Q8N8Q1 229 aa7.99□□□□□ -1.13
SRGAP2B-204ENST00000612199 ARPC1AQ92747 370 aa7.99□□□□□ -1.13
SRGAP2B-204ENST00000612199 PRDM13Q9H4Q3 707 aa7.99□□□□□ -1.13
SRGAP2B-204ENST00000612199 FUT9Q9Y231 359 aa7.99□□□□□ -1.13
SRGAP2B-204ENST00000612199 RNF114Q9Y508 228 aa7.99□□□□□ -1.13
SRGAP2B-204ENST00000612199 TP53BP1Q12888 1972 aaPredicted RBP7.99□□□□□ -1.13
SRGAP2B-204ENST00000612199 CTSGP08311 255 aa7.99□□□□□ -1.13
SRGAP2B-204ENST00000612199 GPR183P32249 361 aa7.99□□□□□ -1.13
SRGAP2B-204ENST00000612199 FGFRL1Q8N441 504 aa7.99□□□□□ -1.13
SRGAP2B-204ENST00000612199 DOCK4Q8N1I0 1966 aa7.99□□□□□ -1.13
SRGAP2B-204ENST00000612199 ODAMA1E959 279 aa7.99□□□□□ -1.13
SRGAP2B-204ENST00000612199 MS4A6AQ9H2W1 248 aa7.99□□□□□ -1.13
SRGAP2B-204ENST00000612199 C14orf132Q9NPU4 83 aa7.99□□□□□ -1.13
SRGAP2B-204ENST00000612199 UTRNP46939 3433 aa7.99□□□□□ -1.13
SRGAP2B-204ENST00000612199 LINC00114Q6XXX2 140 aa7.99□□□□□ -1.13
SRGAP2B-204ENST00000612199 ATRXP46100 2492 aa7.99□□□□□ -1.13
SRGAP2B-204ENST00000612199 A0A087WV48 116 aa7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 TRAV2A0A0B4J234 112 aa7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 RRHO14718 337 aa7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 NDUFA2O43678 99 aa7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 GAGE2EQ4V326 116 aa7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 Q5BKY6 102 aa7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 GAGE2DQ9UEU5 116 aa7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 IGKV2D-24A0A075B6R9 120 aa7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 A0A0G2JK05 382 aa7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 IL6RP08887 468 aaPredicted RBP7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 UNC119Q13432 240 aa7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 PQLC2Q6ZP29 291 aa7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 ZNF645Q8N7E2 425 aa7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 TAF15Q92804 592 aaKnown RBP eCLIP7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 FOXD3Q9UJU5 478 aaPredicted RBP7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 TRPM7Q96QT4 1865 aa7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 THADAQ6YHU6 1953 aa7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 TRAV12-1A0A0B4J245 112 aa7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 IFNL4K9M1U5 179 aa7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 PSPNO60542 156 aa7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 SMIM13P0DJ93 91 aa7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 TMEM54Q969K7 222 aa7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 EFEMP2O95967 443 aa7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 RPS11P62280 158 aaKnown RBP eCLIP7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 PMCHL1Q16048 86 aa7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 TMEM30BQ3MIR4 351 aa7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 FLVCR1-AS1Q8TAF5 88 aa7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 PARD6GQ9BYG4 376 aaPredicted RBP7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 IGHV4-4A0A075B6R2 117 aa7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 LINC00869P0C866 280 aa7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 HOXA5P20719 270 aa7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 RPL15P61313 204 aaKnown RBP7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 NHLRC3Q5JS37 347 aa7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 IL17RELQ6ZVW7 336 aa7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 MMD2Q8IY49 270 aa7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 ZNF703Q9H7S9 590 aaPredicted RBP7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 A0A1B0GWB2 263 aa7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 UMODP07911 640 aa7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 PTGDSP41222 190 aa7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 C6orf226Q5I0X4 101 aa7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 GTF3AQ92664 365 aaKnown RBP7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 TMEM45BQ96B21 275 aa7.98□□□□□ -1.13
SRGAP2B-204ENST00000612199 IGHV4-28A0A0C4DH34 117 aa7.97□□□□□ -1.13
SRGAP2B-204ENST00000612199 IGHV1-69-2A0A0G2JMI3 117 aa7.97□□□□□ -1.13
SRGAP2B-204ENST00000612199 ZNF98A6NK75 572 aa7.97□□□□□ -1.13
SRGAP2B-204ENST00000612199 FHITP49789 147 aa7.97□□□□□ -1.13
SRGAP2B-204ENST00000612199 ACTL10Q5JWF8 245 aa7.97□□□□□ -1.13
SRGAP2B-204ENST00000612199 LSM10Q969L4 123 aaKnown RBP7.97□□□□□ -1.13
SRGAP2B-204ENST00000612199 SCNM1Q9BWG6 230 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms