RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 TM4SF20Q53R12 229 aa9.59□□□□□ -0.87
SRRT-213ENST00000611405 OR1L4Q8NGR5 311 aa9.59□□□□□ -0.87
SRRT-213ENST00000611405 NEU4Q8WWR8 484 aaPredicted RBP9.59□□□□□ -0.87
SRRT-213ENST00000611405 NPIPB3Q92617 1050 aa9.59□□□□□ -0.87
SRRT-213ENST00000611405 ZNF503Q96F45 646 aa9.59□□□□□ -0.87
SRRT-213ENST00000611405 AURKAIP1Q9NWT8 199 aaPredicted RBP9.59□□□□□ -0.87
SRRT-213ENST00000611405 TCRBV4S1A1TA0A5B7 111 aa9.58□□□□□ -0.88
SRRT-213ENST00000611405 IGLC7A0M8Q6 106 aa9.58□□□□□ -0.88
SRRT-213ENST00000611405 PSMB11A5LHX3 300 aa9.58□□□□□ -0.88
SRRT-213ENST00000611405 COX7A1P24310 79 aa9.58□□□□□ -0.88
SRRT-213ENST00000611405 S100A2P29034 98 aa9.58□□□□□ -0.88
SRRT-213ENST00000611405 C4orf17Q53FE4 359 aa9.58□□□□□ -0.88
SRRT-213ENST00000611405 OCC1Q8TAD7 63 aa9.58□□□□□ -0.88
SRRT-213ENST00000611405 TMEM37Q8WXS4 190 aa9.58□□□□□ -0.88
SRRT-213ENST00000611405 RPEQ96AT9 228 aa9.58□□□□□ -0.88
SRRT-213ENST00000611405 PFDN5Q99471 154 aa9.58□□□□□ -0.88
SRRT-213ENST00000611405 RNF5Q99942 180 aa9.58□□□□□ -0.88
SRRT-213ENST00000611405 SIGLEC9Q9Y336 463 aa9.58□□□□□ -0.88
SRRT-213ENST00000611405 DLX1P56177 255 aa9.58□□□□□ -0.88
SRRT-213ENST00000611405 FOXL1Q12952 345 aa9.58□□□□□ -0.88
SRRT-213ENST00000611405 TNXAQ16473 311 aa9.58□□□□□ -0.88
SRRT-213ENST00000611405 C11orf71Q6IPW1 123 aa9.58□□□□□ -0.88
SRRT-213ENST00000611405 GAR1Q9NY12 217 aaKnown RBP9.58□□□□□ -0.88
SRRT-213ENST00000611405 ONECUT1Q9UBC0 465 aa9.58□□□□□ -0.88
SRRT-213ENST00000611405 PGPEP1LA6NFU8 196 aa9.57□□□□□ -0.88
SRRT-213ENST00000611405 IFITM10A6NMD0 228 aa9.57□□□□□ -0.88
SRRT-213ENST00000611405 LY6LH3BQJ8 138 aa9.57□□□□□ -0.88
SRRT-213ENST00000611405 COX7A2P2O60397 106 aa9.57□□□□□ -0.88
SRRT-213ENST00000611405 COMPP49747 757 aaPredicted RBP9.57□□□□□ -0.88
SRRT-213ENST00000611405 PITPNC1Q9UKF7 332 aa9.57□□□□□ -0.88
SRRT-213ENST00000611405 IGKV1D-37A0A075B6S9 117 aa9.57□□□□□ -0.88
SRRT-213ENST00000611405 A0A1W2PRE2 83 aa9.57□□□□□ -0.88
SRRT-213ENST00000611405 SSX2Q16385 188 aa9.57□□□□□ -0.88
SRRT-213ENST00000611405 CLEC12BQ2HXU8 276 aa9.57□□□□□ -0.88
SRRT-213ENST00000611405 HIST3H2BBQ8N257 126 aa9.57□□□□□ -0.88
SRRT-213ENST00000611405 OR10G8Q8NGN5 311 aa9.57□□□□□ -0.88
SRRT-213ENST00000611405 ADGRG4Q8IZF6 3080 aa9.57□□□□□ -0.88
SRRT-213ENST00000611405 REG1AP05451 166 aa9.56□□□□□ -0.88
SRRT-213ENST00000611405 CRYGCP07315 174 aa9.56□□□□□ -0.88
SRRT-213ENST00000611405 CNTFRP26992 372 aa9.56□□□□□ -0.88
SRRT-213ENST00000611405 SSBP2P81877 361 aaPredicted RBP9.56□□□□□ -0.88
SRRT-213ENST00000611405 TEX38Q6PEX7 206 aa9.56□□□□□ -0.88
SRRT-213ENST00000611405 FAM167A-AS1Q96KT0 104 aa9.56□□□□□ -0.88
SRRT-213ENST00000611405 SPTA1P02549 2419 aa9.56□□□□□ -0.88
SRRT-213ENST00000611405 ANKHD1Q8IWZ3 2542 aaKnown RBP9.56□□□□□ -0.88
SRRT-213ENST00000611405 PRB3Q04118 309 aaPredicted RBP9.56□□□□□ -0.88
SRRT-213ENST00000611405 C10orf113Q5VZT2 155 aa9.56□□□□□ -0.88
SRRT-213ENST00000611405 PPP1R27Q86WC6 154 aa9.56□□□□□ -0.88
SRRT-213ENST00000611405 C22orf15Q8WYQ4 148 aa9.56□□□□□ -0.88
SRRT-213ENST00000611405 SLC25A2Q9BXI2 301 aa9.56□□□□□ -0.88
SRRT-213ENST00000611405 SMG1Q96Q15 3661 aaKnown RBP9.56□□□□□ -0.88
SRRT-213ENST00000611405 HELTA6NFD8 242 aa9.55□□□□□ -0.88
SRRT-213ENST00000611405 C22orf46C9J442 243 aa9.55□□□□□ -0.88
SRRT-213ENST00000611405 CORTO00230 105 aa9.55□□□□□ -0.88
SRRT-213ENST00000611405 SOD3P08294 240 aa9.55□□□□□ -0.88
SRRT-213ENST00000611405 PAX2Q02962 417 aa9.55□□□□□ -0.88
SRRT-213ENST00000611405 ACTL10Q5JWF8 245 aa9.55□□□□□ -0.88
SRRT-213ENST00000611405 HCP5Q6MZN7 132 aa9.55□□□□□ -0.88
SRRT-213ENST00000611405 OR1P1Q8NH06 330 aa9.55□□□□□ -0.88
SRRT-213ENST00000611405 MISP3Q96FF7 219 aa9.55□□□□□ -0.88
SRRT-213ENST00000611405 EAF1Q96JC9 268 aaPredicted RBP9.55□□□□□ -0.88
SRRT-213ENST00000611405 NIT2Q9NQR4 276 aa9.55□□□□□ -0.88
SRRT-213ENST00000611405 MALRD1Q5VYJ5 2156 aa9.55□□□□□ -0.88
SRRT-213ENST00000611405 CRYBB3P26998 211 aa9.55□□□□□ -0.88
SRRT-213ENST00000611405 TPTE2P1Q5T6R2 138 aa9.55□□□□□ -0.88
SRRT-213ENST00000611405 MRPL36Q9P0J6 103 aaKnown RBP9.55□□□□□ -0.88
SRRT-213ENST00000611405 IGF2RP11717 2491 aa9.55□□□□□ -0.88
SRRT-213ENST00000611405 M0R1W7 72 aa9.55□□□□□ -0.88
SRRT-213ENST00000611405 LY6HO94772 140 aa9.55□□□□□ -0.88
SRRT-213ENST00000611405 OR10J4P0C629 311 aa9.55□□□□□ -0.88
SRRT-213ENST00000611405 HNF1AP20823 631 aa9.55□□□□□ -0.88
SRRT-213ENST00000611405 ZNF90Q03938 601 aa9.55□□□□□ -0.88
SRRT-213ENST00000611405 GFI1BQ5VTD9 330 aa9.55□□□□□ -0.88
SRRT-213ENST00000611405 CLEC2AQ6UVW9 174 aa9.55□□□□□ -0.88
SRRT-213ENST00000611405 OR5AU1Q8NGC0 362 aa9.55□□□□□ -0.88
SRRT-213ENST00000611405 OR11H6Q8NGC7 330 aa9.55□□□□□ -0.88
SRRT-213ENST00000611405 SGMS2Q8NHU3 365 aa9.55□□□□□ -0.88
SRRT-213ENST00000611405 TRGV9Q99603 122 aa9.55□□□□□ -0.88
SRRT-213ENST00000611405 TRAV9-1A0A075B6T8 112 aa9.54□□□□□ -0.88
SRRT-213ENST00000611405 TRAV5A0A0B4J249 113 aa9.54□□□□□ -0.88
SRRT-213ENST00000611405 A0A0U1RQK1 487 aa9.54□□□□□ -0.88
SRRT-213ENST00000611405 ZNF320A2RRD8 509 aa9.54□□□□□ -0.88
SRRT-213ENST00000611405 GGTLC3B5MD39 225 aa9.54□□□□□ -0.88
SRRT-213ENST00000611405 K7EN84 100 aa9.54□□□□□ -0.88
SRRT-213ENST00000611405 IGHV3-48P01763 117 aa9.54□□□□□ -0.88
SRRT-213ENST00000611405 HTR1DP28221 377 aa9.54□□□□□ -0.88
SRRT-213ENST00000611405 GNG4P50150 75 aa9.54□□□□□ -0.88
SRRT-213ENST00000611405 MFAP2P55001 183 aa9.54□□□□□ -0.88
SRRT-213ENST00000611405 UBE2L3P68036 154 aaKnown RBP9.54□□□□□ -0.88
SRRT-213ENST00000611405 WDR73Q6P4I2 378 aa9.54□□□□□ -0.88
SRRT-213ENST00000611405 PATE2Q6UY27 113 aa9.54□□□□□ -0.88
SRRT-213ENST00000611405 DTX2Q86UW9 622 aa9.54□□□□□ -0.88
SRRT-213ENST00000611405 SRSF8Q9BRL6 282 aaKnown RBP9.54□□□□□ -0.88
SRRT-213ENST00000611405 GPR61Q9BZJ8 451 aa9.54□□□□□ -0.88
SRRT-213ENST00000611405 TNFRSF19Q9NS68 423 aa9.54□□□□□ -0.88
SRRT-213ENST00000611405 ZNF355PQ9NSJ1 428 aa9.54□□□□□ -0.88
SRRT-213ENST00000611405 LOC105371242A0A075B767 164 aa9.54□□□□□ -0.88
SRRT-213ENST00000611405 SUMO1P63165 101 aaKnown RBP9.54□□□□□ -0.88
SRRT-213ENST00000611405 PAXXQ9BUH6 204 aa9.54□□□□□ -0.88
SRRT-213ENST00000611405 DPM3Q9P2X0 92 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms