RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 PLAUP00749 431 aa8.4□□□□□ -1.06
PABPC1-224ENST00000610907 PPIAL4GP0DN37 164 aa8.4□□□□□ -1.06
PABPC1-224ENST00000610907 GATA2P23769 480 aaPredicted RBP8.4□□□□□ -1.06
PABPC1-224ENST00000610907 COL8A2P25067 703 aa8.4□□□□□ -1.06
PABPC1-224ENST00000610907 CRYBB3P26998 211 aa8.4□□□□□ -1.06
PABPC1-224ENST00000610907 RPL27AP46776 148 aaKnown RBP8.4□□□□□ -1.06
PABPC1-224ENST00000610907 CNN1P51911 297 aaKnown RBP8.4□□□□□ -1.06
PABPC1-224ENST00000610907 CLEC12BQ2HXU8 276 aa8.4□□□□□ -1.06
PABPC1-224ENST00000610907 TIGITQ495A1 244 aa8.4□□□□□ -1.06
PABPC1-224ENST00000610907 COX19Q49B96 90 aa8.4□□□□□ -1.06
PABPC1-224ENST00000610907 C10orf113Q5VZT2 155 aa8.4□□□□□ -1.06
PABPC1-224ENST00000610907 OR8B3Q8NGG8 313 aa8.4□□□□□ -1.06
PABPC1-224ENST00000610907 NPIPB3Q92617 1050 aa8.4□□□□□ -1.06
PABPC1-224ENST00000610907 OR8B2Q96RD0 313 aa8.4□□□□□ -1.06
PABPC1-224ENST00000610907 SRSF8Q9BRL6 282 aaKnown RBP8.4□□□□□ -1.06
PABPC1-224ENST00000610907 RAB1BQ9H0U4 201 aa8.4□□□□□ -1.06
PABPC1-224ENST00000610907 OSTCQ9NRP0 149 aa8.4□□□□□ -1.06
PABPC1-224ENST00000610907 AURKAIP1Q9NWT8 199 aaPredicted RBP8.4□□□□□ -1.06
PABPC1-224ENST00000610907 ROS1P08922 2347 aa8.39□□□□□ -1.07
PABPC1-224ENST00000610907 BOD1L1Q8NFC6 3051 aa8.39□□□□□ -1.07
PABPC1-224ENST00000610907 IGKV1D-37A0A075B6S9 117 aa8.39□□□□□ -1.07
PABPC1-224ENST00000610907 TRBV9A0A0B4J1U6 114 aa8.39□□□□□ -1.07
PABPC1-224ENST00000610907 IGHV1-3A0A0C4DH29 117 aa8.39□□□□□ -1.07
PABPC1-224ENST00000610907 IGLC7A0M8Q6 106 aa8.39□□□□□ -1.07
PABPC1-224ENST00000610907 K7EN84 100 aa8.39□□□□□ -1.07
PABPC1-224ENST00000610907 SUMO1P63165 101 aaKnown RBP8.39□□□□□ -1.07
PABPC1-224ENST00000610907 ZNF90Q03938 601 aa8.39□□□□□ -1.07
PABPC1-224ENST00000610907 PDZD11Q5EBL8 140 aa8.39□□□□□ -1.07
PABPC1-224ENST00000610907 TMEM116Q8NCL8 245 aa8.39□□□□□ -1.07
PABPC1-224ENST00000610907 LY6G5BQ8NDX9 201 aa8.39□□□□□ -1.07
PABPC1-224ENST00000610907 OR5R1Q8NH85 324 aa8.39□□□□□ -1.07
PABPC1-224ENST00000610907 TRGV9Q99603 122 aa8.39□□□□□ -1.07
PABPC1-224ENST00000610907 SLC25A2Q9BXI2 301 aa8.39□□□□□ -1.07
PABPC1-224ENST00000610907 SIGLEC9Q9Y336 463 aa8.39□□□□□ -1.07
PABPC1-224ENST00000610907 FAM90A27PA6NNH2 459 aa8.39□□□□□ -1.07
PABPC1-224ENST00000610907 LINC00587B1AMM8 73 aa8.39□□□□□ -1.07
PABPC1-224ENST00000610907 GGTLC3B5MD39 225 aa8.39□□□□□ -1.07
PABPC1-224ENST00000610907 LY6LH3BQJ8 138 aa8.39□□□□□ -1.07
PABPC1-224ENST00000610907 ISLRO14498 428 aa8.39□□□□□ -1.07
PABPC1-224ENST00000610907 GCGP01275 180 aa8.39□□□□□ -1.07
PABPC1-224ENST00000610907 LIPFP07098 398 aa8.39□□□□□ -1.07
PABPC1-224ENST00000610907 ERVFC1-1P60608 527 aa8.39□□□□□ -1.07
PABPC1-224ENST00000610907 UBE2L3P68036 154 aaKnown RBP8.39□□□□□ -1.07
PABPC1-224ENST00000610907 JOSD1Q15040 202 aaPredicted RBP8.39□□□□□ -1.07
PABPC1-224ENST00000610907 RPEL1Q2QD12 228 aa8.39□□□□□ -1.07
PABPC1-224ENST00000610907 CENPWQ5EE01 88 aa8.39□□□□□ -1.07
PABPC1-224ENST00000610907 C10orf55Q5SWW7 151 aa8.39□□□□□ -1.07
PABPC1-224ENST00000610907 PPP1R27Q86WC6 154 aa8.39□□□□□ -1.07
PABPC1-224ENST00000610907 OR5AU1Q8NGC0 362 aa8.39□□□□□ -1.07
PABPC1-224ENST00000610907 TMEM190Q8WZ59 177 aa8.39□□□□□ -1.07
PABPC1-224ENST00000610907 TMEM18Q96B42 140 aa8.39□□□□□ -1.07
PABPC1-224ENST00000610907 RITA1Q96K30 269 aa8.39□□□□□ -1.07
PABPC1-224ENST00000610907 PAXXQ9BUH6 204 aa8.39□□□□□ -1.07
PABPC1-224ENST00000610907 POLEQ07864 2286 aa8.38□□□□□ -1.07
PABPC1-224ENST00000610907 AMBPP02760 352 aa8.38□□□□□ -1.07
PABPC1-224ENST00000610907 LGALS4P56470 323 aa8.38□□□□□ -1.07
PABPC1-224ENST00000610907 PLP1P60201 277 aa8.38□□□□□ -1.07
PABPC1-224ENST00000610907 TNXAQ16473 311 aa8.38□□□□□ -1.07
PABPC1-224ENST00000610907 PATE2Q6UY27 113 aa8.38□□□□□ -1.07
PABPC1-224ENST00000610907 NEU4Q8WWR8 484 aaPredicted RBP8.38□□□□□ -1.07
PABPC1-224ENST00000610907 RPEQ96AT9 228 aa8.38□□□□□ -1.07
PABPC1-224ENST00000610907 PERPQ96FX8 193 aa8.38□□□□□ -1.07
PABPC1-224ENST00000610907 TIMD4Q96H15 378 aa8.38□□□□□ -1.07
PABPC1-224ENST00000610907 TNFRSF19Q9NS68 423 aa8.38□□□□□ -1.07
PABPC1-224ENST00000610907 ZNF355PQ9NSJ1 428 aa8.38□□□□□ -1.07
PABPC1-224ENST00000610907 CDC42EP3Q9UKI2 254 aa8.38□□□□□ -1.07
PABPC1-224ENST00000610907 V9GYV3 84 aa8.38□□□□□ -1.07
PABPC1-224ENST00000610907 PTPRQQ9UMZ3 2332 aa8.38□□□□□ -1.07
PABPC1-224ENST00000610907 SIAH2O43255 324 aa8.37□□□□□ -1.07
PABPC1-224ENST00000610907 GNB1LQ9BYB4 327 aa8.37□□□□□ -1.07
PABPC1-224ENST00000610907 TPSG1Q9NRR2 321 aa8.37□□□□□ -1.07
PABPC1-224ENST00000610907 CBLN4Q9NTU7 201 aa8.37□□□□□ -1.07
PABPC1-224ENST00000610907 F11RQ9Y624 299 aaKnown RBP8.37□□□□□ -1.07
PABPC1-224ENST00000610907 NBEAQ8NFP9 2946 aa8.37□□□□□ -1.07
PABPC1-224ENST00000610907 PKDREJQ9NTG1 2253 aa8.37□□□□□ -1.07
PABPC1-224ENST00000610907 IGHV3-72A0A0B4J1Y9 119 aa8.36□□□□□ -1.07
PABPC1-224ENST00000610907 LYNX1G3V0Z9 82 aa8.36□□□□□ -1.07
PABPC1-224ENST00000610907 M0R1W7 72 aa8.36□□□□□ -1.07
PABPC1-224ENST00000610907 MT-ND6P03923 174 aa8.36□□□□□ -1.07
PABPC1-224ENST00000610907 LYNX1P0DP58 116 aa8.36□□□□□ -1.07
PABPC1-224ENST00000610907 HNF1AP20823 631 aa8.36□□□□□ -1.07
PABPC1-224ENST00000610907 CEACAM3P40198 252 aa8.36□□□□□ -1.07
PABPC1-224ENST00000610907 ADORA2A-AS1P86434 159 aa8.36□□□□□ -1.07
PABPC1-224ENST00000610907 WDR73Q6P4I2 378 aa8.36□□□□□ -1.07
PABPC1-224ENST00000610907 GBGT1Q8N5D6 347 aa8.36□□□□□ -1.07
PABPC1-224ENST00000610907 OR11H6Q8NGC7 330 aa8.36□□□□□ -1.07
PABPC1-224ENST00000610907 OR1L6Q8NGR2 347 aa8.36□□□□□ -1.07
PABPC1-224ENST00000610907 SMIM12Q96EX1 92 aa8.36□□□□□ -1.07
PABPC1-224ENST00000610907 IGF2BP2-AS1Q96M15 143 aa8.36□□□□□ -1.07
PABPC1-224ENST00000610907 CHRDL1Q9BU40 450 aa8.36□□□□□ -1.07
PABPC1-224ENST00000610907 PRDM13Q9H4Q3 707 aa8.36□□□□□ -1.07
PABPC1-224ENST00000610907 RAXQ9Y2V3 346 aa8.36□□□□□ -1.07
PABPC1-224ENST00000610907 TRAV5A0A0B4J249 113 aa8.35□□□□□ -1.07
PABPC1-224ENST00000610907 TEX22C9J3V5 150 aa8.35□□□□□ -1.07
PABPC1-224ENST00000610907 C22orf46C9J442 243 aa8.35□□□□□ -1.07
PABPC1-224ENST00000610907 SLC17A3O00476 420 aa8.35□□□□□ -1.07
PABPC1-224ENST00000610907 HYPMO75409 117 aa8.35□□□□□ -1.07
PABPC1-224ENST00000610907 IGLV2-8P01709 118 aa8.35□□□□□ -1.07
PABPC1-224ENST00000610907 PKIAP61925 76 aa8.35□□□□□ -1.07
PABPC1-224ENST00000610907 CX3CL1P78423 397 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms