RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 NOXA1Q86UR1 476 aa10.1□□□□□ -0.79
SENP3-209ENST00000610454 CENPSQ8N2Z9 138 aa10.1□□□□□ -0.79
SENP3-209ENST00000610454 GINS3Q9BRX5 216 aa10.1□□□□□ -0.79
SENP3-209ENST00000610454 DUXBA0A1W2PPF3 345 aa10.09□□□□□ -0.79
SENP3-209ENST00000610454 OR11H12B2RN74 326 aa10.09□□□□□ -0.79
SENP3-209ENST00000610454 K7EMT4 169 aa10.09□□□□□ -0.79
SENP3-209ENST00000610454 ZNF207O43670 478 aaKnown RBP10.09□□□□□ -0.79
SENP3-209ENST00000610454 CD7P09564 240 aa10.09□□□□□ -0.79
SENP3-209ENST00000610454 C8orf88P0DMB2 117 aa10.09□□□□□ -0.79
SENP3-209ENST00000610454 BMI1P35226 326 aa10.09□□□□□ -0.79
SENP3-209ENST00000610454 LYZL2Q7Z4W2 148 aa10.09□□□□□ -0.79
SENP3-209ENST00000610454 SLC24A4Q8NFF2 622 aa10.09□□□□□ -0.79
SENP3-209ENST00000610454 OR1S1Q8NH92 325 aa10.09□□□□□ -0.79
SENP3-209ENST00000610454 RCHY1Q96PM5 261 aa10.09□□□□□ -0.79
SENP3-209ENST00000610454 C19orf73Q9NVV2 129 aa10.09□□□□□ -0.79
SENP3-209ENST00000610454 LINC00854A0A1B0GVQ3 168 aa10.08□□□□□ -0.8
SENP3-209ENST00000610454 SPAG8Q99932 426 aaPredicted RBP10.08□□□□□ -0.8
SENP3-209ENST00000610454 A0A1B0GU03 582 aa10.07□□□□□ -0.8
SENP3-209ENST00000610454 IFNA10P01566 189 aa10.07□□□□□ -0.8
SENP3-209ENST00000610454 NPY1RP25929 384 aa10.07□□□□□ -0.8
SENP3-209ENST00000610454 UBE2MP61081 183 aaKnown RBP10.07□□□□□ -0.8
SENP3-209ENST00000610454 TNFRSF9Q07011 255 aa10.07□□□□□ -0.8
SENP3-209ENST00000610454 BAK1Q16611 211 aa10.07□□□□□ -0.8
SENP3-209ENST00000610454 C2orf83Q53S99 150 aa10.07□□□□□ -0.8
SENP3-209ENST00000610454 NMSQ5H8A3 153 aa10.07□□□□□ -0.8
SENP3-209ENST00000610454 ETFRF1Q6IPR1 90 aa10.07□□□□□ -0.8
SENP3-209ENST00000610454 ZNF600Q6ZNG1 722 aa10.07□□□□□ -0.8
SENP3-209ENST00000610454 DEFB125Q8N687 156 aa10.07□□□□□ -0.8
SENP3-209ENST00000610454 TMEM116Q8NCL8 245 aa10.07□□□□□ -0.8
SENP3-209ENST00000610454 RNASEH2CQ8TDP1 164 aaKnown RBP10.07□□□□□ -0.8
SENP3-209ENST00000610454 DTD1Q8TEA8 209 aa10.07□□□□□ -0.8
SENP3-209ENST00000610454 SPATA25Q9BR10 227 aa10.07□□□□□ -0.8
SENP3-209ENST00000610454 SRD5A3Q9H8P0 318 aa10.07□□□□□ -0.8
SENP3-209ENST00000610454 STAB2Q8WWQ8 2551 aa10.06□□□□□ -0.8
SENP3-209ENST00000610454 TRAV30A0A087WSZ9 112 aa10.06□□□□□ -0.8
SENP3-209ENST00000610454 TRAV14DV4A0A0A6YYC5 116 aa10.06□□□□□ -0.8
SENP3-209ENST00000610454 IGHV7-4-1A0A0J9YVY3 117 aa10.06□□□□□ -0.8
SENP3-209ENST00000610454 OR4C46A6NHA9 309 aa10.06□□□□□ -0.8
SENP3-209ENST00000610454 TSPAN4O14817 238 aa10.06□□□□□ -0.8
SENP3-209ENST00000610454 CLN5O75503 358 aa10.06□□□□□ -0.8
SENP3-209ENST00000610454 SFT2D2O95562 160 aa10.06□□□□□ -0.8
SENP3-209ENST00000610454 SLC25A4P12235 298 aa10.06□□□□□ -0.8
SENP3-209ENST00000610454 PPP1R1AQ13522 171 aa10.06□□□□□ -0.8
SENP3-209ENST00000610454 BSXQ3C1V8 233 aa10.06□□□□□ -0.8
SENP3-209ENST00000610454 PVRIGQ6DKI7 326 aa10.06□□□□□ -0.8
SENP3-209ENST00000610454 OR4X1Q8NH49 305 aa10.06□□□□□ -0.8
SENP3-209ENST00000610454 OR10C1Q96KK4 312 aa10.06□□□□□ -0.8
SENP3-209ENST00000610454 C7orf50Q9BRJ6 194 aaKnown RBP10.06□□□□□ -0.8
SENP3-209ENST00000610454 HSPB7Q9UBY9 170 aa10.06□□□□□ -0.8
SENP3-209ENST00000610454 SMPXQ9UHP9 88 aa10.06□□□□□ -0.8
SENP3-209ENST00000610454 PUS1Q9Y606 427 aaKnown RBP eCLIP10.06□□□□□ -0.8
SENP3-209ENST00000610454 DNAH9Q9NYC9 4486 aa10.05□□□□□ -0.8
SENP3-209ENST00000610454 IGHV3-49A0A0A0MS15 119 aa10.05□□□□□ -0.8
SENP3-209ENST00000610454 NDUFB6O95139 128 aa10.05□□□□□ -0.8
SENP3-209ENST00000610454 TMEM50AO95807 157 aa10.05□□□□□ -0.8
SENP3-209ENST00000610454 IL7P13232 177 aa10.05□□□□□ -0.8
SENP3-209ENST00000610454 HAGHQ16775 308 aa10.05□□□□□ -0.8
SENP3-209ENST00000610454 LRTM2Q8N967 370 aa10.05□□□□□ -0.8
SENP3-209ENST00000610454 NARS2Q96I59 477 aaKnown RBP10.05□□□□□ -0.8
SENP3-209ENST00000610454 TM2D3Q9BRN9 247 aa10.05□□□□□ -0.8
SENP3-209ENST00000610454 RHPN1-AS1Q9BWJ2 59 aa10.05□□□□□ -0.8
SENP3-209ENST00000610454 WFDC10AQ9H1F0 79 aa10.05□□□□□ -0.8
SENP3-209ENST00000610454 RBKSQ9H477 322 aa10.05□□□□□ -0.8
SENP3-209ENST00000610454 FNDC4Q9H6D8 234 aaPredicted RBP10.05□□□□□ -0.8
SENP3-209ENST00000610454 TMEM231Q9H6L2 316 aa10.05□□□□□ -0.8
SENP3-209ENST00000610454 TMED3Q9Y3Q3 217 aa10.05□□□□□ -0.8
SENP3-209ENST00000610454 U3KQ87 197 aa10.05□□□□□ -0.8
SENP3-209ENST00000610454 TENM3Q9P273 2699 aa10.05□□□□□ -0.8
SENP3-209ENST00000610454 CHEK1O14757 476 aa10.04□□□□□ -0.8
SENP3-209ENST00000610454 MED6O75586 246 aa10.04□□□□□ -0.8
SENP3-209ENST00000610454 IFNA4P05014 189 aa10.04□□□□□ -0.8
SENP3-209ENST00000610454 CD5P06127 495 aa10.04□□□□□ -0.8
SENP3-209ENST00000610454 SLC25A6P12236 298 aa10.04□□□□□ -0.8
SENP3-209ENST00000610454 RND2P52198 227 aa10.04□□□□□ -0.8
SENP3-209ENST00000610454 TOMM20LQ6UXN7 152 aa10.04□□□□□ -0.8
SENP3-209ENST00000610454 IGHV3OR16-13A0A075B7E8 117 aa10.03□□□□□ -0.8
SENP3-209ENST00000610454 IGHV3-74A0A0B4J1X5 117 aa10.03□□□□□ -0.8
SENP3-209ENST00000610454 FAM90A26D6RGX4 464 aa10.03□□□□□ -0.8
SENP3-209ENST00000610454 HOXB5P09067 269 aa10.03□□□□□ -0.8
SENP3-209ENST00000610454 NPPCP23582 126 aa10.03□□□□□ -0.8
SENP3-209ENST00000610454 ATP5IP56385 69 aaPredicted RBP10.03□□□□□ -0.8
SENP3-209ENST00000610454 PAFAH1B2P68402 229 aa10.03□□□□□ -0.8
SENP3-209ENST00000610454 MLANAQ16655 118 aa10.03□□□□□ -0.8
SENP3-209ENST00000610454 C4orf46Q504U0 113 aa10.03□□□□□ -0.8
SENP3-209ENST00000610454 OR1S2Q8NGQ3 325 aa10.03□□□□□ -0.8
SENP3-209ENST00000610454 COQ8AQ8NI60 647 aa10.03□□□□□ -0.8
SENP3-209ENST00000610454 METTL26Q96S19 204 aa10.03□□□□□ -0.8
SENP3-209ENST00000610454 RNF2Q99496 336 aa10.03□□□□□ -0.8
SENP3-209ENST00000610454 SDHCQ99643 169 aaPredicted RBP10.03□□□□□ -0.8
SENP3-209ENST00000610454 IGKV3-7A0A075B6H7 116 aa10.02□□□□□ -0.81
SENP3-209ENST00000610454 A0A1W2PS18 150 aa10.02□□□□□ -0.81
SENP3-209ENST00000610454 C9orf170A2RU37 121 aa10.02□□□□□ -0.81
SENP3-209ENST00000610454 IFNA21P01568 189 aa10.02□□□□□ -0.81
SENP3-209ENST00000610454 OR10J1P30954 320 aa10.02□□□□□ -0.81
SENP3-209ENST00000610454 RAB11AP62491 216 aa10.02□□□□□ -0.81
SENP3-209ENST00000610454 RPL11P62913 178 aaKnown RBP10.02□□□□□ -0.81
SENP3-209ENST00000610454 RPP30P78346 268 aaKnown RBP10.02□□□□□ -0.81
SENP3-209ENST00000610454 CNPY1Q3B7I2 92 aa10.02□□□□□ -0.81
SENP3-209ENST00000610454 TIGITQ495A1 244 aa10.02□□□□□ -0.81
SENP3-209ENST00000610454 PRSS54Q6PEW0 395 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms