RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 DCHS2Q6V1P9 2916 aa16.63■□□□□ 0.25
SSBP3-216ENST00000610401 COL12A1Q99715 3063 aa16.63■□□□□ 0.25
SSBP3-216ENST00000610401 ISLRO14498 428 aa16.63■□□□□ 0.25
SSBP3-216ENST00000610401 TSKUQ8WUA8 353 aa16.63■□□□□ 0.25
SSBP3-216ENST00000610401 KBTBD11-OT1A0A1B0GTJ5 212 aa16.62■□□□□ 0.25
SSBP3-216ENST00000610401 CT45A6P0DMU7 189 aa16.62■□□□□ 0.25
SSBP3-216ENST00000610401 CT45A5P0DMU8 189 aa16.62■□□□□ 0.25
SSBP3-216ENST00000610401 CT45A7P0DMV0 189 aa16.62■□□□□ 0.25
SSBP3-216ENST00000610401 DDB2Q92466 427 aa16.62■□□□□ 0.25
SSBP3-216ENST00000610401 PMCHL2Q9BQD1 86 aa16.62■□□□□ 0.25
SSBP3-216ENST00000610401 MRPL20Q9BYC9 149 aaKnown RBP16.62■□□□□ 0.25
SSBP3-216ENST00000610401 A0A1W2PRD5 423 aa16.62■□□□□ 0.25
SSBP3-216ENST00000610401 A0A1W2PRF3 423 aa16.62■□□□□ 0.25
SSBP3-216ENST00000610401 A0A1W2PRM7 423 aa16.62■□□□□ 0.25
SSBP3-216ENST00000610401 ZNF324O75467 553 aaPredicted RBP16.62■□□□□ 0.25
SSBP3-216ENST00000610401 AREGP15514 252 aa16.62■□□□□ 0.25
SSBP3-216ENST00000610401 FAM27E3Q08E93 113 aa16.62■□□□□ 0.25
SSBP3-216ENST00000610401 STUMQ69YW2 141 aa16.62■□□□□ 0.25
SSBP3-216ENST00000610401 CLEC7AQ9BXN2 247 aa16.62■□□□□ 0.25
SSBP3-216ENST00000610401 SPAARA0A1B0GVQ0 90 aa16.61■□□□□ 0.25
SSBP3-216ENST00000610401 COX7A2P2O60397 106 aa16.61■□□□□ 0.25
SSBP3-216ENST00000610401 RUSC1-AS1Q66K80 236 aa16.61■□□□□ 0.25
SSBP3-216ENST00000610401 DEFB123Q8N688 67 aa16.61■□□□□ 0.25
SSBP3-216ENST00000610401 KCNS1Q96KK3 526 aa16.61■□□□□ 0.25
SSBP3-216ENST00000610401 HYPMO75409 117 aa16.61■□□□□ 0.25
SSBP3-216ENST00000610401 ZNF138P52744 262 aa16.61■□□□□ 0.25
SSBP3-216ENST00000610401 TNFAIP6P98066 277 aaPredicted RBP16.61■□□□□ 0.25
SSBP3-216ENST00000610401 SFXN3Q9BWM7 321 aa16.61■□□□□ 0.25
SSBP3-216ENST00000610401 MRPL36Q9P0J6 103 aaKnown RBP16.61■□□□□ 0.25
SSBP3-216ENST00000610401 AMMECR1Q9Y4X0 333 aaPredicted RBP16.61■□□□□ 0.25
SSBP3-216ENST00000610401 M0R2Z0 102 aa16.61■□□□□ 0.25
SSBP3-216ENST00000610401 C20orf144Q9BQM9 153 aa16.61■□□□□ 0.25
SSBP3-216ENST00000610401 GNB1LQ9BYB4 327 aa16.61■□□□□ 0.25
SSBP3-216ENST00000610401 ZNF71Q9NQZ8 489 aaPredicted RBP16.61■□□□□ 0.25
SSBP3-216ENST00000610401 TMEM167BQ9NRX6 74 aa16.61■□□□□ 0.25
SSBP3-216ENST00000610401 J3QW42 95 aa16.6■□□□□ 0.25
SSBP3-216ENST00000610401 GUCD1Q96NT3 240 aa16.6■□□□□ 0.25
SSBP3-216ENST00000610401 GDF5OSQ5U4N7 250 aa16.6■□□□□ 0.25
SSBP3-216ENST00000610401 C1orf174Q8IYL3 243 aa16.6■□□□□ 0.25
SSBP3-216ENST00000610401 Q8N976 141 aa16.6■□□□□ 0.25
SSBP3-216ENST00000610401 OTOGLQ3ZCN5 2332 aa16.6■□□□□ 0.25
SSBP3-216ENST00000610401 IGLV2-8P01709 118 aa16.59■□□□□ 0.25
SSBP3-216ENST00000610401 C8orf88P0DMB2 117 aa16.59■□□□□ 0.25
SSBP3-216ENST00000610401 RBMXL3Q8N7X1 1067 aaKnown RBP16.59■□□□□ 0.25
SSBP3-216ENST00000610401 ZNF439Q8NDP4 499 aa16.59■□□□□ 0.25
SSBP3-216ENST00000610401 OR1B1Q8NGR6 318 aa16.59■□□□□ 0.25
SSBP3-216ENST00000610401 NEUROG1Q92886 237 aa16.59■□□□□ 0.25
SSBP3-216ENST00000610401 RNF2Q99496 336 aa16.59■□□□□ 0.25
SSBP3-216ENST00000610401 AMY1AP04745 511 aa16.59■□□□□ 0.25
SSBP3-216ENST00000610401 CSN3P07498 182 aa16.59■□□□□ 0.25
SSBP3-216ENST00000610401 TMPRSS3P57727 454 aa16.59■□□□□ 0.25
SSBP3-216ENST00000610401 SPTAN1Q13813 2472 aaKnown RBP16.59■□□□□ 0.25
SSBP3-216ENST00000610401 MALRD1Q5VYJ5 2156 aa16.59■□□□□ 0.25
SSBP3-216ENST00000610401 NIT1Q86X76 327 aa16.59■□□□□ 0.25
SSBP3-216ENST00000610401 TPSG1Q9NRR2 321 aa16.59■□□□□ 0.25
SSBP3-216ENST00000610401 FOXA2Q9Y261 457 aaPredicted RBP16.59■□□□□ 0.25
SSBP3-216ENST00000610401 C9JCJ5 164 aa16.59■□□□□ 0.25
SSBP3-216ENST00000610401 COL5A1-AS1Q5SY13 56 aa16.59■□□□□ 0.25
SSBP3-216ENST00000610401 Q71RC1 249 aaPredicted RBP16.59■□□□□ 0.25
SSBP3-216ENST00000610401 IGFBPL1Q8WX77 278 aa16.59■□□□□ 0.25
SSBP3-216ENST00000610401 SLC25A33Q9BSK2 321 aa16.59■□□□□ 0.25
SSBP3-216ENST00000610401 HIGD1CA8MV81 97 aa16.58■□□□□ 0.24
SSBP3-216ENST00000610401 RTL8BQ17RB0 113 aa16.58■□□□□ 0.24
SSBP3-216ENST00000610401 SLC35E1Q96K37 410 aa16.58■□□□□ 0.24
SSBP3-216ENST00000610401 TXNDC17Q9BRA2 123 aa16.58■□□□□ 0.24
SSBP3-216ENST00000610401 F2RL2O00254 374 aa16.58■□□□□ 0.24
SSBP3-216ENST00000610401 CCL17Q92583 94 aa16.58■□□□□ 0.24
SSBP3-216ENST00000610401 TAS2R45P59539 299 aa16.57■□□□□ 0.24
SSBP3-216ENST00000610401 NUP35Q8NFH5 326 aa16.57■□□□□ 0.24
SSBP3-216ENST00000610401 TPPP3Q9BW30 176 aa16.57■□□□□ 0.24
SSBP3-216ENST00000610401 DKK4Q9UBT3 224 aa16.57■□□□□ 0.24
SSBP3-216ENST00000610401 M0QZK8 103 aa16.57■□□□□ 0.24
SSBP3-216ENST00000610401 UPK2O00526 184 aa16.57■□□□□ 0.24
SSBP3-216ENST00000610401 Q0VG73 95 aa16.57■□□□□ 0.24
SSBP3-216ENST00000610401 NUDT10Q8NFP7 164 aa16.57■□□□□ 0.24
SSBP3-216ENST00000610401 C18orf32Q8TCD1 76 aa16.57■□□□□ 0.24
SSBP3-216ENST00000610401 C11orf52Q96A22 123 aa16.57■□□□□ 0.24
SSBP3-216ENST00000610401 NUDT11Q96G61 164 aa16.57■□□□□ 0.24
SSBP3-216ENST00000610401 PAXXQ9BUH6 204 aa16.57■□□□□ 0.24
SSBP3-216ENST00000610401 FNDC4Q9H6D8 234 aaPredicted RBP16.57■□□□□ 0.24
SSBP3-216ENST00000610401 SAP30LQ9HAJ7 183 aa16.57■□□□□ 0.24
SSBP3-216ENST00000610401 LAMTOR2Q9Y2Q5 125 aa16.57■□□□□ 0.24
SSBP3-216ENST00000610401 TRAV8-1A0A0A6YYK1 113 aa16.57■□□□□ 0.24
SSBP3-216ENST00000610401 TRGV8A0A0C4DH27 118 aa16.57■□□□□ 0.24
SSBP3-216ENST00000610401 SLC25A5P05141 298 aaKnown RBP16.57■□□□□ 0.24
SSBP3-216ENST00000610401 ZNF474Q6S9Z5 364 aaPredicted RBP16.57■□□□□ 0.24
SSBP3-216ENST00000610401 LINC00173Q6ZV60 143 aa16.57■□□□□ 0.24
SSBP3-216ENST00000610401 OR4B1Q8NGF8 309 aa16.57■□□□□ 0.24
SSBP3-216ENST00000610401 OR5B3Q8NH48 314 aa16.57■□□□□ 0.24
SSBP3-216ENST00000610401 SARAFQ96BY9 339 aa16.57■□□□□ 0.24
SSBP3-216ENST00000610401 RITA1Q96K30 269 aa16.57■□□□□ 0.24
SSBP3-216ENST00000610401 OR8B2Q96RD0 313 aa16.57■□□□□ 0.24
SSBP3-216ENST00000610401 PRNDQ9UKY0 176 aa16.57■□□□□ 0.24
SSBP3-216ENST00000610401 SNAI2O43623 268 aa16.56■□□□□ 0.24
SSBP3-216ENST00000610401 SLC25A17O43808 307 aa16.56■□□□□ 0.24
SSBP3-216ENST00000610401 RNASE2P10153 161 aaKnown RBP16.56■□□□□ 0.24
SSBP3-216ENST00000610401 SLC25A2Q9BXI2 301 aa16.56■□□□□ 0.24
SSBP3-216ENST00000610401 SLC25A15Q9Y619 301 aa16.56■□□□□ 0.24
SSBP3-216ENST00000610401 PRR33A8MZF0 331 aa16.56■□□□□ 0.24
SSBP3-216ENST00000610401 PTTG1IPP53801 180 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms