RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.16□□□□□ -1.74
SCARNA15-201ENST00000607520 OR4P4Q8NGL7 312 aa4.16□□□□□ -1.74
SCARNA15-201ENST00000607520 BORCS7Q96B45 105 aa4.16□□□□□ -1.74
SCARNA15-201ENST00000607520 RNF2Q99496 336 aa4.16□□□□□ -1.74
SCARNA15-201ENST00000607520 MBNL3Q9NUK0 354 aaKnown RBP4.16□□□□□ -1.74
SCARNA15-201ENST00000607520 PEF1Q9UBV8 284 aaKnown RBP4.16□□□□□ -1.74
SCARNA15-201ENST00000607520 FAM223BA6NKX1 122 aa4.16□□□□□ -1.74
SCARNA15-201ENST00000607520 CLDN34H7C241 214 aa4.16□□□□□ -1.74
SCARNA15-201ENST00000607520 CT45A10P0DMU9 189 aa4.16□□□□□ -1.74
SCARNA15-201ENST00000607520 PAX6P26367 422 aa4.16□□□□□ -1.74
SCARNA15-201ENST00000607520 RUNX1Q01196 453 aa4.16□□□□□ -1.74
SCARNA15-201ENST00000607520 C17orf58Q2M2W7 97 aa4.16□□□□□ -1.74
SCARNA15-201ENST00000607520 RNF212Q495C1 297 aa4.16□□□□□ -1.74
SCARNA15-201ENST00000607520 C9orf66Q5T8R8 295 aa4.16□□□□□ -1.74
SCARNA15-201ENST00000607520 SAMD13Q5VXD3 122 aa4.16□□□□□ -1.74
SCARNA15-201ENST00000607520 FAM223AQ8IWN6 122 aa4.16□□□□□ -1.74
SCARNA15-201ENST00000607520 ZMAT4Q9H898 229 aa4.16□□□□□ -1.74
SCARNA15-201ENST00000607520 SIGLEC9Q9Y336 463 aa4.16□□□□□ -1.74
SCARNA15-201ENST00000607520 VWC2LB2RUY7 222 aa4.15□□□□□ -1.74
SCARNA15-201ENST00000607520 SLC31A2O15432 143 aa4.15□□□□□ -1.74
SCARNA15-201ENST00000607520 SPP1P10451 314 aa4.15□□□□□ -1.74
SCARNA15-201ENST00000607520 CTRB1P17538 263 aa4.15□□□□□ -1.74
SCARNA15-201ENST00000607520 IER3P46695 156 aa4.15□□□□□ -1.74
SCARNA15-201ENST00000607520 FGF8P55075 233 aaPredicted RBP4.15□□□□□ -1.74
SCARNA15-201ENST00000607520 SRSF4Q08170 494 aaKnown RBP4.15□□□□□ -1.74
SCARNA15-201ENST00000607520 FABP9Q0Z7S8 132 aa4.15□□□□□ -1.74
SCARNA15-201ENST00000607520 FFAR4Q5NUL3 377 aa4.15□□□□□ -1.74
SCARNA15-201ENST00000607520 CTRB2Q6GPI1 263 aa4.15□□□□□ -1.74
SCARNA15-201ENST00000607520 LCN12Q6JVE5 192 aa4.15□□□□□ -1.74
SCARNA15-201ENST00000607520 C8orf31Q8N9H6 132 aa4.15□□□□□ -1.74
SCARNA15-201ENST00000607520 IL22RA2Q969J5 263 aa4.15□□□□□ -1.74
SCARNA15-201ENST00000607520 C16orf92Q96LL3 132 aa4.15□□□□□ -1.74
SCARNA15-201ENST00000607520 LYRM2Q9NU23 88 aaPredicted RBP4.15□□□□□ -1.74
SCARNA15-201ENST00000607520 BET1LQ9NYM9 111 aa4.15□□□□□ -1.74
SCARNA15-201ENST00000607520 PRRC2CQ9Y520 2896 aaKnown RBP4.15□□□□□ -1.74
SCARNA15-201ENST00000607520 CPAMD8Q8IZJ3 1885 aa4.15□□□□□ -1.74
SCARNA15-201ENST00000607520 LOC105371267A0A1B0GV96 52 aa4.15□□□□□ -1.74
SCARNA15-201ENST00000607520 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.15□□□□□ -1.74
SCARNA15-201ENST00000607520 HYPMO75409 117 aa4.15□□□□□ -1.74
SCARNA15-201ENST00000607520 SLC25A6P12236 298 aa4.15□□□□□ -1.74
SCARNA15-201ENST00000607520 SPSB3Q6PJ21 355 aa4.15□□□□□ -1.74
SCARNA15-201ENST00000607520 OR4X1Q8NH49 305 aa4.15□□□□□ -1.74
SCARNA15-201ENST00000607520 GPR146Q96CH1 333 aa4.15□□□□□ -1.74
SCARNA15-201ENST00000607520 SMIM8Q96KF7 97 aa4.15□□□□□ -1.74
SCARNA15-201ENST00000607520 SERTAD4Q9NUC0 356 aa4.15□□□□□ -1.74
SCARNA15-201ENST00000607520 DOK5Q9P104 306 aa4.15□□□□□ -1.74
SCARNA15-201ENST00000607520 LAMA2P24043 3122 aaKnown RBP4.15□□□□□ -1.75
SCARNA15-201ENST00000607520 SZT2Q5T011 3432 aa4.15□□□□□ -1.75
SCARNA15-201ENST00000607520 ZNF705GA8MUZ8 300 aaPredicted RBP4.15□□□□□ -1.75
SCARNA15-201ENST00000607520 FAM90A26D6RGX4 464 aa4.15□□□□□ -1.75
SCARNA15-201ENST00000607520 G3V3Q6 166 aa4.15□□□□□ -1.75
SCARNA15-201ENST00000607520 H3BQ15 152 aa4.15□□□□□ -1.75
SCARNA15-201ENST00000607520 CCL24O00175 119 aa4.15□□□□□ -1.75
SCARNA15-201ENST00000607520 ATP6V0E1O15342 81 aa4.15□□□□□ -1.75
SCARNA15-201ENST00000607520 IGHV3-23P01764 117 aa4.15□□□□□ -1.75
SCARNA15-201ENST00000607520 RAB5AP20339 215 aa4.15□□□□□ -1.75
SCARNA15-201ENST00000607520 FHITP49789 147 aa4.15□□□□□ -1.75
SCARNA15-201ENST00000607520 TMEM241Q24JQ0 296 aa4.15□□□□□ -1.75
SCARNA15-201ENST00000607520 PDZD11Q5EBL8 140 aa4.15□□□□□ -1.75
SCARNA15-201ENST00000607520 OR11H1Q8NG94 326 aa4.15□□□□□ -1.75
SCARNA15-201ENST00000607520 OR10G4Q8NGN3 311 aa4.15□□□□□ -1.75
SCARNA15-201ENST00000607520 OR10G9Q8NGN4 311 aa4.15□□□□□ -1.75
SCARNA15-201ENST00000607520 OR10G7Q8NGN6 311 aa4.15□□□□□ -1.75
SCARNA15-201ENST00000607520 DDB2Q92466 427 aa4.15□□□□□ -1.75
SCARNA15-201ENST00000607520 SH3BGRL3Q9H299 93 aa4.15□□□□□ -1.75
SCARNA15-201ENST00000607520 ZNF430Q9H8G1 570 aaPredicted RBP4.15□□□□□ -1.75
SCARNA15-201ENST00000607520 HIGD1AQ9Y241 93 aa4.15□□□□□ -1.75
SCARNA15-201ENST00000607520 CARHSP1Q9Y2V2 147 aaKnown RBP4.15□□□□□ -1.75
SCARNA15-201ENST00000607520 DBX1A6NMT0 343 aa4.14□□□□□ -1.75
SCARNA15-201ENST00000607520 MDKP21741 143 aaPredicted RBP4.14□□□□□ -1.75
SCARNA15-201ENST00000607520 MYCNOSP40205 109 aa4.14□□□□□ -1.75
SCARNA15-201ENST00000607520 ZNF137PP52743 207 aa4.14□□□□□ -1.75
SCARNA15-201ENST00000607520 SERF2P84101 59 aa4.14□□□□□ -1.75
SCARNA15-201ENST00000607520 CD69Q07108 199 aa4.14□□□□□ -1.75
SCARNA15-201ENST00000607520 PNRC1Q12796 327 aaPredicted RBP4.14□□□□□ -1.75
SCARNA15-201ENST00000607520 C15orf32Q32M92 178 aa4.14□□□□□ -1.75
SCARNA15-201ENST00000607520 KHDC3LQ587J8 217 aa4.14□□□□□ -1.75
SCARNA15-201ENST00000607520 TMEM41BQ5BJD5 291 aa4.14□□□□□ -1.75
SCARNA15-201ENST00000607520 ZNF600Q6ZNG1 722 aa4.14□□□□□ -1.75
SCARNA15-201ENST00000607520 LY6G5BQ8NDX9 201 aa4.14□□□□□ -1.75
SCARNA15-201ENST00000607520 OR4B1Q8NGF8 309 aa4.14□□□□□ -1.75
SCARNA15-201ENST00000607520 TMEM167AQ8TBQ9 72 aa4.14□□□□□ -1.75
SCARNA15-201ENST00000607520 NOL4LQ96MY1 436 aaPredicted RBP4.14□□□□□ -1.75
SCARNA15-201ENST00000607520 S4R3C0 116 aa4.14□□□□□ -1.75
SCARNA15-201ENST00000607520 COL6A3P12111 3177 aa4.14□□□□□ -1.75
SCARNA15-201ENST00000607520 TRBV7-1A0A0A6YYK4 115 aa4.14□□□□□ -1.75
SCARNA15-201ENST00000607520 TSTD3H0UI37 97 aa4.14□□□□□ -1.75
SCARNA15-201ENST00000607520 HLA-DRB1P01911 266 aa4.14□□□□□ -1.75
SCARNA15-201ENST00000607520 UCP1P25874 307 aa4.14□□□□□ -1.75
SCARNA15-201ENST00000607520 RND3P61587 244 aa4.14□□□□□ -1.75
SCARNA15-201ENST00000607520 DLK1P80370 383 aa4.14□□□□□ -1.75
SCARNA15-201ENST00000607520 FOXE3Q13461 319 aa4.14□□□□□ -1.75
SCARNA15-201ENST00000607520 IZUMO4Q1ZYL8 232 aa4.14□□□□□ -1.75
SCARNA15-201ENST00000607520 SMIM15Q7Z3B0 74 aa4.14□□□□□ -1.75
SCARNA15-201ENST00000607520 C1orf147Q96MC9 270 aaPredicted RBP4.14□□□□□ -1.75
SCARNA15-201ENST00000607520 RSG1Q9BU20 258 aa4.14□□□□□ -1.75
SCARNA15-201ENST00000607520 NPVFQ9HCQ7 196 aa4.14□□□□□ -1.75
SCARNA15-201ENST00000607520 VAX2Q9UIW0 290 aa4.14□□□□□ -1.75
SCARNA15-201ENST00000607520 A0A1W2PPQ1 181 aa4.14□□□□□ -1.75
SCARNA15-201ENST00000607520 ZNF207O43670 478 aaKnown RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms