RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 LILRB2Q8N423 598 aa10.85□□□□□ -0.67
CTSA-216ENST00000607212 ZNF414Q96IQ9 312 aa10.85□□□□□ -0.67
CTSA-216ENST00000607212 FRAS1Q86XX4 4008 aa10.85□□□□□ -0.67
CTSA-216ENST00000607212 TRAV2A0A0B4J234 112 aa10.84□□□□□ -0.67
CTSA-216ENST00000607212 IGHV4-28A0A0C4DH34 117 aa10.84□□□□□ -0.67
CTSA-216ENST00000607212 KNCNA6PVL3 124 aa10.84□□□□□ -0.67
CTSA-216ENST00000607212 CORTO00230 105 aa10.84□□□□□ -0.67
CTSA-216ENST00000607212 TMEM50AO95807 157 aa10.84□□□□□ -0.67
CTSA-216ENST00000607212 ZNF688P0C7X2 276 aa10.84□□□□□ -0.67
CTSA-216ENST00000607212 PI3P19957 117 aa10.84□□□□□ -0.67
CTSA-216ENST00000607212 TRIM16LQ309B1 348 aa10.84□□□□□ -0.67
CTSA-216ENST00000607212 GPX8Q8TED1 209 aa10.84□□□□□ -0.67
CTSA-216ENST00000607212 GRAMD2BQ96HH9 432 aa10.84□□□□□ -0.67
CTSA-216ENST00000607212 ZFAND3Q9H8U3 227 aa10.84□□□□□ -0.67
CTSA-216ENST00000607212 SCPEP1Q9HB40 452 aa10.84□□□□□ -0.67
CTSA-216ENST00000607212 AGRNO00468 2067 aa10.84□□□□□ -0.67
CTSA-216ENST00000607212 A0A1B0GU03 582 aa10.83□□□□□ -0.68
CTSA-216ENST00000607212 FAM25AB3EWG3 89 aa10.83□□□□□ -0.68
CTSA-216ENST00000607212 FAM25CB3EWG5 89 aa10.83□□□□□ -0.68
CTSA-216ENST00000607212 FAM25GB3EWG6 89 aa10.83□□□□□ -0.68
CTSA-216ENST00000607212 HLA-DMBP28068 263 aa10.83□□□□□ -0.68
CTSA-216ENST00000607212 ETV6P41212 452 aa10.83□□□□□ -0.68
CTSA-216ENST00000607212 P2RY1P47900 373 aa10.83□□□□□ -0.68
CTSA-216ENST00000607212 EIF2B2P49770 351 aaKnown RBP10.83□□□□□ -0.68
CTSA-216ENST00000607212 PPP5CP53041 499 aa10.83□□□□□ -0.68
CTSA-216ENST00000607212 UCP3P55916 312 aa10.83□□□□□ -0.68
CTSA-216ENST00000607212 TMEM41BQ5BJD5 291 aa10.83□□□□□ -0.68
CTSA-216ENST00000607212 ACTL10Q5JWF8 245 aa10.83□□□□□ -0.68
CTSA-216ENST00000607212 MORN3Q6PF18 240 aaPredicted RBP10.83□□□□□ -0.68
CTSA-216ENST00000607212 RRNAD1Q96FB5 475 aaKnown RBP10.83□□□□□ -0.68
CTSA-216ENST00000607212 TRAV10A0A0B4J240 114 aa10.82□□□□□ -0.68
CTSA-216ENST00000607212 SPP1P10451 314 aa10.82□□□□□ -0.68
CTSA-216ENST00000607212 MIFP14174 115 aa10.82□□□□□ -0.68
CTSA-216ENST00000607212 PIGPP57054 158 aa10.82□□□□□ -0.68
CTSA-216ENST00000607212 Q8NAQ8 132 aa10.82□□□□□ -0.68
CTSA-216ENST00000607212 CLEC5AQ9NY25 188 aa10.82□□□□□ -0.68
CTSA-216ENST00000607212 COPZ2Q9P299 210 aa10.82□□□□□ -0.68
CTSA-216ENST00000607212 APLNQ9ULZ1 77 aa10.82□□□□□ -0.68
CTSA-216ENST00000607212 NOL3O60936 208 aaKnown RBP10.81□□□□□ -0.68
CTSA-216ENST00000607212 CLN5O75503 358 aa10.81□□□□□ -0.68
CTSA-216ENST00000607212 IGKV1-5P01602 117 aa10.81□□□□□ -0.68
CTSA-216ENST00000607212 APOA1P02647 267 aa10.81□□□□□ -0.68
CTSA-216ENST00000607212 DHRS2Q13268 280 aa10.81□□□□□ -0.68
CTSA-216ENST00000607212 TIGITQ495A1 244 aa10.81□□□□□ -0.68
CTSA-216ENST00000607212 RNASE10Q5GAN6 216 aaKnown RBP10.81□□□□□ -0.68
CTSA-216ENST00000607212 Q6ZTC4 211 aa10.81□□□□□ -0.68
CTSA-216ENST00000607212 TRPT1Q86TN4 253 aaKnown RBP10.81□□□□□ -0.68
CTSA-216ENST00000607212 RAB2BQ8WUD1 216 aa10.81□□□□□ -0.68
CTSA-216ENST00000607212 YIPF6Q96EC8 236 aa10.81□□□□□ -0.68
CTSA-216ENST00000607212 FUNDC2Q9BWH2 189 aa10.81□□□□□ -0.68
CTSA-216ENST00000607212 HRH4Q9H3N8 390 aa10.81□□□□□ -0.68
CTSA-216ENST00000607212 TBC1D24Q9ULP9 559 aa10.81□□□□□ -0.68
CTSA-216ENST00000607212 IGHV4-4A0A075B6R2 117 aa10.8□□□□□ -0.68
CTSA-216ENST00000607212 C3orf85A0A1B0GTC6 90 aa10.8□□□□□ -0.68
CTSA-216ENST00000607212 RPS10-NUDT3A0A1W2PQS6 291 aa10.8□□□□□ -0.68
CTSA-216ENST00000607212 K7EQG2 157 aa10.8□□□□□ -0.68
CTSA-216ENST00000607212 HPGDSO60760 199 aa10.8□□□□□ -0.68
CTSA-216ENST00000607212 RBMY1A1P0DJD3 496 aaKnown RBP10.8□□□□□ -0.68
CTSA-216ENST00000607212 RBMY1CP0DJD4 496 aa10.8□□□□□ -0.68
CTSA-216ENST00000607212 RNASE2P10153 161 aaKnown RBP10.8□□□□□ -0.68
CTSA-216ENST00000607212 C4BPBP20851 252 aa10.8□□□□□ -0.68
CTSA-216ENST00000607212 RBMY1FQ15415 496 aaKnown RBP10.8□□□□□ -0.68
CTSA-216ENST00000607212 SP6Q3SY56 376 aa10.8□□□□□ -0.68
CTSA-216ENST00000607212 SCGB2B2Q4G0G5 96 aa10.8□□□□□ -0.68
CTSA-216ENST00000607212 PSMG4Q5JS54 123 aa10.8□□□□□ -0.68
CTSA-216ENST00000607212 CCDC71LQ8N9Z2 235 aa10.8□□□□□ -0.68
CTSA-216ENST00000607212 ZNF486Q96H40 463 aaPredicted RBP10.8□□□□□ -0.68
CTSA-216ENST00000607212 TP53RKQ96S44 253 aa10.8□□□□□ -0.68
CTSA-216ENST00000607212 TRAV30A0A087WSZ9 112 aa10.79□□□□□ -0.68
CTSA-216ENST00000607212 A0A0B4J293 547 aa10.79□□□□□ -0.68
CTSA-216ENST00000607212 HELTA6NFD8 242 aa10.79□□□□□ -0.68
CTSA-216ENST00000607212 ELK1P19419 428 aa10.79□□□□□ -0.68
CTSA-216ENST00000607212 RND3P61587 244 aa10.79□□□□□ -0.68
CTSA-216ENST00000607212 MLANAQ16655 118 aa10.79□□□□□ -0.68
CTSA-216ENST00000607212 ZNF767PQ75MW2 155 aa10.79□□□□□ -0.68
CTSA-216ENST00000607212 BCL7BQ9BQE9 202 aa10.79□□□□□ -0.68
CTSA-216ENST00000607212 MRPL36Q9P0J6 103 aaKnown RBP10.79□□□□□ -0.68
CTSA-216ENST00000607212 HNRNPCP07910 306 aaKnown RBP eCLIP10.78□□□□□ -0.68
CTSA-216ENST00000607212 ZNF182P17025 639 aaPredicted RBP10.78□□□□□ -0.68
CTSA-216ENST00000607212 CRYBB3P26998 211 aa10.78□□□□□ -0.68
CTSA-216ENST00000607212 NCS1P62166 190 aa10.78□□□□□ -0.68
CTSA-216ENST00000607212 SPCS2Q15005 226 aa10.78□□□□□ -0.68
CTSA-216ENST00000607212 CTF1Q16619 201 aa10.78□□□□□ -0.68
CTSA-216ENST00000607212 MZT2AQ6P582 158 aa10.78□□□□□ -0.68
CTSA-216ENST00000607212 OR4X1Q8NH49 305 aa10.78□□□□□ -0.68
CTSA-216ENST00000607212 ZFAND1Q8TCF1 268 aa10.78□□□□□ -0.68
CTSA-216ENST00000607212 Q8WTZ3 238 aa10.78□□□□□ -0.68
CTSA-216ENST00000607212 FNDC4Q9H6D8 234 aaPredicted RBP10.78□□□□□ -0.68
CTSA-216ENST00000607212 ELOA3CA0A087WX78 387 aaPredicted RBP10.77□□□□□ -0.69
CTSA-216ENST00000607212 DEFB131BA0A096LNP1 70 aa10.77□□□□□ -0.69
CTSA-216ENST00000607212 GABARAPO95166 117 aa10.77□□□□□ -0.69
CTSA-216ENST00000607212 CD3DP04234 171 aa10.77□□□□□ -0.69
CTSA-216ENST00000607212 VBP1P61758 197 aa10.77□□□□□ -0.69
CTSA-216ENST00000607212 NUTF2P61970 127 aaKnown RBP10.77□□□□□ -0.69
CTSA-216ENST00000607212 PVRIGQ6DKI7 326 aa10.77□□□□□ -0.69
CTSA-216ENST00000607212 OR1S2Q8NGQ3 325 aa10.77□□□□□ -0.69
CTSA-216ENST00000607212 HEYLQ9NQ87 328 aaPredicted RBP10.77□□□□□ -0.69
CTSA-216ENST00000607212 X6R8D5 127 aa10.77□□□□□ -0.69
CTSA-216ENST00000607212 DNAH10Q8IVF4 4471 aa10.77□□□□□ -0.69
CTSA-216ENST00000607212 CEBPZOSA8MTT3 80 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms