RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 FAM90A2PQ658T7 463 aa10.89□□□□□ -0.67
SSBP4-214ENST00000607020 THOC7Q6I9Y2 204 aaKnown RBP10.89□□□□□ -0.67
SSBP4-214ENST00000607020 HSD17B13Q7Z5P4 300 aaPredicted RBP10.89□□□□□ -0.67
SSBP4-214ENST00000607020 CCDC71LQ8N9Z2 235 aa10.89□□□□□ -0.67
SSBP4-214ENST00000607020 CHRDL1Q9BU40 450 aa10.89□□□□□ -0.67
SSBP4-214ENST00000607020 C20orf24Q9BUV8 137 aa10.89□□□□□ -0.67
SSBP4-214ENST00000607020 COPZ2Q9P299 210 aa10.89□□□□□ -0.67
SSBP4-214ENST00000607020 C14orf166Q9Y224 244 aaKnown RBP10.89□□□□□ -0.67
SSBP4-214ENST00000607020 IGHV4-4A0A075B6R2 117 aa10.88□□□□□ -0.67
SSBP4-214ENST00000607020 TRAV10A0A0B4J240 114 aa10.88□□□□□ -0.67
SSBP4-214ENST00000607020 MARCH11A6NNE9 402 aa10.88□□□□□ -0.67
SSBP4-214ENST00000607020 F8W735 103 aaPredicted RBP10.88□□□□□ -0.67
SSBP4-214ENST00000607020 CA1P00915 261 aaPredicted RBP10.88□□□□□ -0.67
SSBP4-214ENST00000607020 INPP1P49441 399 aa10.88□□□□□ -0.67
SSBP4-214ENST00000607020 PVRIGQ6DKI7 326 aa10.88□□□□□ -0.67
SSBP4-214ENST00000607020 POM121L12Q8N7R1 296 aa10.88□□□□□ -0.67
SSBP4-214ENST00000607020 DMBX1Q8NFW5 382 aa10.88□□□□□ -0.67
SSBP4-214ENST00000607020 ZNF414Q96IQ9 312 aa10.88□□□□□ -0.67
SSBP4-214ENST00000607020 OR10C1Q96KK4 312 aa10.88□□□□□ -0.67
SSBP4-214ENST00000607020 RTBDNQ9BSG5 229 aaPredicted RBP10.88□□□□□ -0.67
SSBP4-214ENST00000607020 RHPN1-AS1Q9BWJ2 59 aa10.88□□□□□ -0.67
SSBP4-214ENST00000607020 QTRT1Q9BXR0 403 aaKnown RBP10.88□□□□□ -0.67
SSBP4-214ENST00000607020 COMMD5Q9GZQ3 224 aa10.88□□□□□ -0.67
SSBP4-214ENST00000607020 TMEM140Q9NV12 185 aa10.88□□□□□ -0.67
SSBP4-214ENST00000607020 C21orf62Q9NYP8 219 aa10.88□□□□□ -0.67
SSBP4-214ENST00000607020 GPR132Q9UNW8 380 aa10.88□□□□□ -0.67
SSBP4-214ENST00000607020 IGHV7-4-1A0A0J9YVY3 117 aa10.87□□□□□ -0.67
SSBP4-214ENST00000607020 C3orf85A0A1B0GTC6 90 aa10.87□□□□□ -0.67
SSBP4-214ENST00000607020 KRASP01116 189 aa10.87□□□□□ -0.67
SSBP4-214ENST00000607020 CD5P06127 495 aa10.87□□□□□ -0.67
SSBP4-214ENST00000607020 SERPINE2P07093 398 aa10.87□□□□□ -0.67
SSBP4-214ENST00000607020 RBMY1A1P0DJD3 496 aaKnown RBP10.87□□□□□ -0.67
SSBP4-214ENST00000607020 RBMY1CP0DJD4 496 aa10.87□□□□□ -0.67
SSBP4-214ENST00000607020 IL7P13232 177 aa10.87□□□□□ -0.67
SSBP4-214ENST00000607020 HLA-DMBP28068 263 aa10.87□□□□□ -0.67
SSBP4-214ENST00000607020 ERVK-16P61578 105 aa10.87□□□□□ -0.67
SSBP4-214ENST00000607020 RBMY1FQ15415 496 aaKnown RBP10.87□□□□□ -0.67
SSBP4-214ENST00000607020 LGALS9BQ3B8N2 356 aa10.87□□□□□ -0.67
SSBP4-214ENST00000607020 TMEM116Q8NCL8 245 aa10.87□□□□□ -0.67
SSBP4-214ENST00000607020 SCARB1Q8WTV0 552 aa10.87□□□□□ -0.67
SSBP4-214ENST00000607020 SCGB3A2Q96PL1 93 aa10.87□□□□□ -0.67
SSBP4-214ENST00000607020 TP53RKQ96S44 253 aa10.87□□□□□ -0.67
SSBP4-214ENST00000607020 PKD1P98161 4303 aa10.87□□□□□ -0.67
SSBP4-214ENST00000607020 TRAV3A0A0B4J244 114 aa10.86□□□□□ -0.67
SSBP4-214ENST00000607020 ZNF207O43670 478 aaKnown RBP10.86□□□□□ -0.67
SSBP4-214ENST00000607020 B3GALNT1O75752 331 aa10.86□□□□□ -0.67
SSBP4-214ENST00000607020 DFFBO76075 338 aa10.86□□□□□ -0.67
SSBP4-214ENST00000607020 IGKV1-39P01597 117 aa10.86□□□□□ -0.67
SSBP4-214ENST00000607020 IGKV1D-39P04432 117 aa10.86□□□□□ -0.67
SSBP4-214ENST00000607020 CTSGP08311 255 aa10.86□□□□□ -0.67
SSBP4-214ENST00000607020 MIFP14174 115 aa10.86□□□□□ -0.67
SSBP4-214ENST00000607020 WT1-ASQ06250 92 aa10.86□□□□□ -0.67
SSBP4-214ENST00000607020 TMEM41BQ5BJD5 291 aa10.86□□□□□ -0.67
SSBP4-214ENST00000607020 SLC25A24Q6NUK1 477 aa10.86□□□□□ -0.67
SSBP4-214ENST00000607020 CADM3Q8N126 398 aa10.86□□□□□ -0.67
SSBP4-214ENST00000607020 OR10W1Q8NGF6 305 aa10.86□□□□□ -0.67
SSBP4-214ENST00000607020 NAA60Q9H7X0 242 aa10.86□□□□□ -0.67
SSBP4-214ENST00000607020 IGHV3OR16-8A0A075B7F1 116 aa10.85□□□□□ -0.67
SSBP4-214ENST00000607020 IGHV4-28A0A0C4DH34 117 aa10.85□□□□□ -0.67
SSBP4-214ENST00000607020 CRYM-AS1A6NIL9 109 aa10.85□□□□□ -0.67
SSBP4-214ENST00000607020 K7EIM0 57 aa10.85□□□□□ -0.67
SSBP4-214ENST00000607020 GIG44P09565 113 aaPredicted RBP10.85□□□□□ -0.67
SSBP4-214ENST00000607020 TRAPPC2P0DI81 140 aa10.85□□□□□ -0.67
SSBP4-214ENST00000607020 TRAPPC2BP0DI82 140 aa10.85□□□□□ -0.67
SSBP4-214ENST00000607020 P0DMU3 169 aa10.85□□□□□ -0.67
SSBP4-214ENST00000607020 FAM231AP0DMU4 169 aa10.85□□□□□ -0.67
SSBP4-214ENST00000607020 FAM231CP0DMU5 169 aa10.85□□□□□ -0.67
SSBP4-214ENST00000607020 OR13C7P0DN81 318 aa10.85□□□□□ -0.67
SSBP4-214ENST00000607020 G6PCP35575 357 aa10.85□□□□□ -0.67
SSBP4-214ENST00000607020 PAFAH1B2P68402 229 aa10.85□□□□□ -0.67
SSBP4-214ENST00000607020 RELQ04864 619 aaPredicted RBP10.85□□□□□ -0.67
SSBP4-214ENST00000607020 Q6ZTC4 211 aa10.85□□□□□ -0.67
SSBP4-214ENST00000607020 S100ZQ8WXG8 99 aa10.85□□□□□ -0.67
SSBP4-214ENST00000607020 SEC22AQ96IW7 307 aa10.85□□□□□ -0.67
SSBP4-214ENST00000607020 CCDC32Q9BV29 185 aa10.85□□□□□ -0.67
SSBP4-214ENST00000607020 F11RQ9Y624 299 aaKnown RBP10.85□□□□□ -0.67
SSBP4-214ENST00000607020 HSPG2P98160 4391 aa10.85□□□□□ -0.67
SSBP4-214ENST00000607020 TRAV2A0A0B4J234 112 aa10.84□□□□□ -0.67
SSBP4-214ENST00000607020 TEX13DA0A0J9YY54 714 aaPredicted RBP10.84□□□□□ -0.67
SSBP4-214ENST00000607020 LINC00854A0A1B0GVQ3 168 aa10.84□□□□□ -0.67
SSBP4-214ENST00000607020 NAP1L6A6NFF2 107 aa10.84□□□□□ -0.67
SSBP4-214ENST00000607020 ZNF705EA8MWA4 302 aaPredicted RBP10.84□□□□□ -0.67
SSBP4-214ENST00000607020 AMBPP02760 352 aa10.84□□□□□ -0.67
SSBP4-214ENST00000607020 UCP1P25874 307 aa10.84□□□□□ -0.67
SSBP4-214ENST00000607020 TFPI2P48307 235 aa10.84□□□□□ -0.67
SSBP4-214ENST00000607020 SP6Q3SY56 376 aa10.84□□□□□ -0.67
SSBP4-214ENST00000607020 TMEM230Q96A57 120 aa10.84□□□□□ -0.67
SSBP4-214ENST00000607020 SLC25A21Q9BQT8 299 aaPredicted RBP10.84□□□□□ -0.67
SSBP4-214ENST00000607020 C7orf50Q9BRJ6 194 aaKnown RBP10.84□□□□□ -0.67
SSBP4-214ENST00000607020 TMEM222Q9H0R3 208 aa10.84□□□□□ -0.67
SSBP4-214ENST00000607020 TRAV14DV4A0A0A6YYC5 116 aa10.83□□□□□ -0.68
SSBP4-214ENST00000607020 TEX50A0A1B0GTY4 177 aa10.83□□□□□ -0.68
SSBP4-214ENST00000607020 OR5AC1P0C628 307 aa10.83□□□□□ -0.68
SSBP4-214ENST00000607020 TRIM16LQ309B1 348 aa10.83□□□□□ -0.68
SSBP4-214ENST00000607020 CENPSQ8N2Z9 138 aa10.83□□□□□ -0.68
SSBP4-214ENST00000607020 OR1L8Q8NGR8 309 aa10.83□□□□□ -0.68
SSBP4-214ENST00000607020 TSC22D3Q99576 134 aa10.83□□□□□ -0.68
SSBP4-214ENST00000607020 NDUFA4L2Q9NRX3 87 aa10.83□□□□□ -0.68
SSBP4-214ENST00000607020 CENPXA8MT69 81 aa10.82□□□□□ -0.68
SSBP4-214ENST00000607020 NUPL2O15504 423 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms