RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 CTXND1A0A1B0GTU2 59 aa17.04■□□□□ 0.32
USP6NL-204ENST00000606752 FSHBP01225 129 aa17.04■□□□□ 0.32
USP6NL-204ENST00000606752 CD5P06127 495 aa17.04■□□□□ 0.32
USP6NL-204ENST00000606752 ZP3P21754 424 aa17.04■□□□□ 0.32
USP6NL-204ENST00000606752 RND2P52198 227 aa17.04■□□□□ 0.32
USP6NL-204ENST00000606752 GCSAMLQ5JQS6 135 aa17.04■□□□□ 0.32
USP6NL-204ENST00000606752 FAM122CQ6P4D5 195 aa17.04■□□□□ 0.32
USP6NL-204ENST00000606752 THAP8Q8NA92 274 aa17.04■□□□□ 0.32
USP6NL-204ENST00000606752 TMEM116Q8NCL8 245 aa17.04■□□□□ 0.32
USP6NL-204ENST00000606752 LINC00052Q96N35 136 aa17.04■□□□□ 0.32
USP6NL-204ENST00000606752 PBDC1Q9BVG4 233 aa17.04■□□□□ 0.32
USP6NL-204ENST00000606752 TREM1Q9NP99 234 aa17.04■□□□□ 0.32
USP6NL-204ENST00000606752 MRPL36Q9P0J6 103 aaKnown RBP17.04■□□□□ 0.32
USP6NL-204ENST00000606752 MAP1LC3B2A6NCE7 125 aa17.03■□□□□ 0.32
USP6NL-204ENST00000606752 A6NDX4 124 aa17.03■□□□□ 0.32
USP6NL-204ENST00000606752 LINC00869P0C866 280 aa17.03■□□□□ 0.32
USP6NL-204ENST00000606752 GUK1Q16774 197 aa17.03■□□□□ 0.32
USP6NL-204ENST00000606752 SGMS2Q8NHU3 365 aa17.03■□□□□ 0.32
USP6NL-204ENST00000606752 C22orf15Q8WYQ4 148 aa17.03■□□□□ 0.32
USP6NL-204ENST00000606752 RAB24Q969Q5 203 aa17.03■□□□□ 0.32
USP6NL-204ENST00000606752 SCRT1Q9BWW7 348 aa17.03■□□□□ 0.32
USP6NL-204ENST00000606752 MAP1LC3BQ9GZQ8 125 aa17.03■□□□□ 0.32
USP6NL-204ENST00000606752 TMEM231Q9H6L2 316 aa17.03■□□□□ 0.32
USP6NL-204ENST00000606752 SLC25A22Q9H936 323 aa17.03■□□□□ 0.32
USP6NL-204ENST00000606752 CELSR1Q9NYQ6 3014 aa17.03■□□□□ 0.32
USP6NL-204ENST00000606752 SEC14L6B5MCN3 397 aa17.03■□□□□ 0.32
USP6NL-204ENST00000606752 I3L2K1 104 aa17.03■□□□□ 0.32
USP6NL-204ENST00000606752 NARS2Q96I59 477 aaKnown RBP17.03■□□□□ 0.32
USP6NL-204ENST00000606752 PITPNC1Q9UKF7 332 aa17.03■□□□□ 0.32
USP6NL-204ENST00000606752 CDC34P49427 236 aaPredicted RBP17.02■□□□□ 0.31
USP6NL-204ENST00000606752 CYP2G1PQ6ZSU1 146 aa17.02■□□□□ 0.31
USP6NL-204ENST00000606752 BCL6BQ8N143 479 aaPredicted RBP17.02■□□□□ 0.31
USP6NL-204ENST00000606752 CIARTQ8N365 385 aaPredicted RBP17.02■□□□□ 0.31
USP6NL-204ENST00000606752 EIF5A2Q9GZV4 153 aaKnown RBP17.02■□□□□ 0.31
USP6NL-204ENST00000606752 UNC79Q9P2D8 2635 aa17.01■□□□□ 0.31
USP6NL-204ENST00000606752 TMEM218A2RU14 115 aa17.01■□□□□ 0.31
USP6NL-204ENST00000606752 AMY1AP04745 511 aa17.01■□□□□ 0.31
USP6NL-204ENST00000606752 PEA15Q15121 130 aa17.01■□□□□ 0.31
USP6NL-204ENST00000606752 LY6EQ16553 131 aa17.01■□□□□ 0.31
USP6NL-204ENST00000606752 DEFB112Q30KQ8 113 aa17.01■□□□□ 0.31
USP6NL-204ENST00000606752 FASNP49327 2511 aaKnown RBP17.01■□□□□ 0.31
USP6NL-204ENST00000606752 IGKV1D-37A0A075B6S9 117 aa17■□□□□ 0.31
USP6NL-204ENST00000606752 IGHV3-21A0A0B4J1V1 117 aa17■□□□□ 0.31
USP6NL-204ENST00000606752 A0A1W2PPV4 95 aa17■□□□□ 0.31
USP6NL-204ENST00000606752 ZFP92A6NM28 416 aa17■□□□□ 0.31
USP6NL-204ENST00000606752 FGF8P55075 233 aaPredicted RBP17■□□□□ 0.31
USP6NL-204ENST00000606752 C9orf139Q6ZV77 190 aa17■□□□□ 0.31
USP6NL-204ENST00000606752 TMEM68Q96MH6 324 aa17■□□□□ 0.31
USP6NL-204ENST00000606752 FANCD2OSQ96PS1 177 aa17■□□□□ 0.31
USP6NL-204ENST00000606752 CCDC168Q8NDH2 2452 aa17■□□□□ 0.31
USP6NL-204ENST00000606752 IGLV11-55A0A075B6I3 123 aa17■□□□□ 0.31
USP6NL-204ENST00000606752 MDFIC2A0A1B0GVS7 189 aa17■□□□□ 0.31
USP6NL-204ENST00000606752 TCRBV4S1A1TA0A5B7 111 aa17■□□□□ 0.31
USP6NL-204ENST00000606752 RBFOX3A6NFN3 312 aa17■□□□□ 0.31
USP6NL-204ENST00000606752 K7EIM0 57 aa17■□□□□ 0.31
USP6NL-204ENST00000606752 ATP6V0E1O15342 81 aa17■□□□□ 0.31
USP6NL-204ENST00000606752 EIF3GO75821 320 aaKnown RBP eCLIP17■□□□□ 0.31
USP6NL-204ENST00000606752 OR5T1Q8NG75 326 aa17■□□□□ 0.31
USP6NL-204ENST00000606752 ZANQ9Y493 2812 aa17■□□□□ 0.31
USP6NL-204ENST00000606752 SH2D7A6NKC9 451 aaPredicted RBP16.99■□□□□ 0.31
USP6NL-204ENST00000606752 M0QZK8 103 aa16.99■□□□□ 0.31
USP6NL-204ENST00000606752 HMGB3O15347 200 aaKnown RBP16.99■□□□□ 0.31
USP6NL-204ENST00000606752 GATA2P23769 480 aaPredicted RBP16.99■□□□□ 0.31
USP6NL-204ENST00000606752 SELENOTP62341 195 aa16.99■□□□□ 0.31
USP6NL-204ENST00000606752 OR4X1Q8NH49 305 aa16.99■□□□□ 0.31
USP6NL-204ENST00000606752 TMUB1Q9BVT8 246 aa16.99■□□□□ 0.31
USP6NL-204ENST00000606752 PDZD2O15018 2839 aa16.99■□□□□ 0.31
USP6NL-204ENST00000606752 UNQ5815/PRO19632Q6UWF5 114 aa16.98■□□□□ 0.31
USP6NL-204ENST00000606752 C16orf82Q7Z2V1 217 aa16.98■□□□□ 0.31
USP6NL-204ENST00000606752 TRGV9Q99603 122 aa16.98■□□□□ 0.31
USP6NL-204ENST00000606752 SMDT1Q9H4I9 107 aa16.98■□□□□ 0.31
USP6NL-204ENST00000606752 TNFRSF19Q9NS68 423 aa16.98■□□□□ 0.31
USP6NL-204ENST00000606752 LINC01548A6NM66 108 aa16.98■□□□□ 0.31
USP6NL-204ENST00000606752 C9JQL5 133 aa16.98■□□□□ 0.31
USP6NL-204ENST00000606752 SMAD7O15105 426 aaKnown RBP16.98■□□□□ 0.31
USP6NL-204ENST00000606752 ZNF90Q03938 601 aa16.98■□□□□ 0.31
USP6NL-204ENST00000606752 PMS2P11Q13670 270 aa16.98■□□□□ 0.31
USP6NL-204ENST00000606752 AKIRIN2Q53H80 203 aa16.98■□□□□ 0.31
USP6NL-204ENST00000606752 FAM110DQ8TAY7 271 aaPredicted RBP16.98■□□□□ 0.31
USP6NL-204ENST00000606752 RARRES2Q99969 163 aa16.98■□□□□ 0.31
USP6NL-204ENST00000606752 C19orf24Q9BVV8 132 aa16.98■□□□□ 0.31
USP6NL-204ENST00000606752 THYN1Q9P016 225 aa16.98■□□□□ 0.31
USP6NL-204ENST00000606752 CSMD1Q96PZ7 3565 aa16.97■□□□□ 0.31
USP6NL-204ENST00000606752 RHOBP62745 196 aa16.97■□□□□ 0.31
USP6NL-204ENST00000606752 HAGHQ16775 308 aa16.97■□□□□ 0.31
USP6NL-204ENST00000606752 GNG13Q9P2W3 67 aa16.97■□□□□ 0.31
USP6NL-204ENST00000606752 ECSCRQ19T08 205 aa16.96■□□□□ 0.31
USP6NL-204ENST00000606752 SEPSECSQ9HD40 501 aaKnown RBP16.96■□□□□ 0.31
USP6NL-204ENST00000606752 ITPR2Q14571 2701 aa16.96■□□□□ 0.31
USP6NL-204ENST00000606752 IER3P46695 156 aa16.96■□□□□ 0.3
USP6NL-204ENST00000606752 ZNF506Q5JVG8 444 aa16.96■□□□□ 0.3
USP6NL-204ENST00000606752 IGHV4-59P01825 116 aa16.95■□□□□ 0.3
USP6NL-204ENST00000606752 HIST1H1BP16401 226 aaKnown RBP16.95■□□□□ 0.3
USP6NL-204ENST00000606752 KLK9Q2XQG4 91 aa16.95■□□□□ 0.3
USP6NL-204ENST00000606752 KLK9Q9UKQ9 250 aa16.95■□□□□ 0.3
USP6NL-204ENST00000606752 ITPR3Q14573 2671 aa16.94■□□□□ 0.3
USP6NL-204ENST00000606752 CLN5O75503 358 aa16.94■□□□□ 0.3
USP6NL-204ENST00000606752 SFTA3P0C7M3 94 aa16.94■□□□□ 0.3
USP6NL-204ENST00000606752 IGLC1P0CG04 106 aa16.94■□□□□ 0.3
USP6NL-204ENST00000606752 STAG3L2P0CL84 134 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms