RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 SLC16A13Q7RTY0 426 aa5.94□□□□□ -1.46
MSH6-211ENST00000606499 AKAP14Q86UN6 197 aa5.94□□□□□ -1.46
MSH6-211ENST00000606499 NOXA1Q86UR1 476 aa5.94□□□□□ -1.46
MSH6-211ENST00000606499 HAPLN4Q86UW8 402 aa5.94□□□□□ -1.46
MSH6-211ENST00000606499 NDUFA11Q86Y39 141 aa5.94□□□□□ -1.46
MSH6-211ENST00000606499 UBAC2Q8NBM4 344 aa5.94□□□□□ -1.46
MSH6-211ENST00000606499 THAP6Q8TBB0 222 aa5.94□□□□□ -1.46
MSH6-211ENST00000606499 ZNF502Q8TBZ5 544 aa5.94□□□□□ -1.46
MSH6-211ENST00000606499 RNASEH2CQ8TDP1 164 aaKnown RBP5.94□□□□□ -1.46
MSH6-211ENST00000606499 SCARB1Q8WTV0 552 aa5.94□□□□□ -1.46
MSH6-211ENST00000606499 C4orf3Q8WVX3 66 aa5.94□□□□□ -1.46
MSH6-211ENST00000606499 DCUN1D4Q92564 292 aa5.94□□□□□ -1.46
MSH6-211ENST00000606499 EEF1AKMT3Q96AZ1 226 aa5.94□□□□□ -1.46
MSH6-211ENST00000606499 USMG5Q96IX5 58 aa5.94□□□□□ -1.46
MSH6-211ENST00000606499 ST6GAL2Q96JF0 529 aa5.94□□□□□ -1.46
MSH6-211ENST00000606499 DUX3Q96PT4 197 aa5.94□□□□□ -1.46
MSH6-211ENST00000606499 ZC4H2Q9NQZ6 224 aa5.94□□□□□ -1.46
MSH6-211ENST00000606499 IGHV4OR15-8A0A075B7B6 117 aa5.93□□□□□ -1.46
MSH6-211ENST00000606499 A0A087WW49 117 aa5.93□□□□□ -1.46
MSH6-211ENST00000606499 FXYD6-FXYD2A0A087WZ82 144 aa5.93□□□□□ -1.46
MSH6-211ENST00000606499 OR2T8A6NH00 312 aa5.93□□□□□ -1.46
MSH6-211ENST00000606499 PPP5D1E7EU14 171 aa5.93□□□□□ -1.46
MSH6-211ENST00000606499 F8W735 103 aaPredicted RBP5.93□□□□□ -1.46
MSH6-211ENST00000606499 GPR183P32249 361 aa5.93□□□□□ -1.46
MSH6-211ENST00000606499 P2RY1P47900 373 aa5.93□□□□□ -1.46
MSH6-211ENST00000606499 RND2P52198 227 aa5.93□□□□□ -1.46
MSH6-211ENST00000606499 ATP5IP56385 69 aaPredicted RBP5.93□□□□□ -1.46
MSH6-211ENST00000606499 EWSR1Q01844 656 aaKnown RBP eCLIP5.93□□□□□ -1.465e-7■■■■□ 21.4
MSH6-211ENST00000606499 CD69Q07108 199 aa5.93□□□□□ -1.46
MSH6-211ENST00000606499 FGL1Q08830 312 aa5.93□□□□□ -1.46
MSH6-211ENST00000606499 SLC38A11Q08AI6 406 aa5.93□□□□□ -1.46
MSH6-211ENST00000606499 Q56UQ5 140 aa5.93□□□□□ -1.46
MSH6-211ENST00000606499 ZNF343Q6P1L6 599 aa5.93□□□□□ -1.46
MSH6-211ENST00000606499 ACSM6Q6P461 480 aa5.93□□□□□ -1.46
MSH6-211ENST00000606499 CLEC19AQ6UXS0 136 aa5.93□□□□□ -1.46
MSH6-211ENST00000606499 TMEM252Q8N6L7 170 aa5.93□□□□□ -1.46
MSH6-211ENST00000606499 TMEM217Q8N7C4 229 aa5.93□□□□□ -1.46
MSH6-211ENST00000606499 VN1R17PQ8TDU5 208 aa5.93□□□□□ -1.46
MSH6-211ENST00000606499 BSCL2Q96G97 398 aaPredicted RBP5.93□□□□□ -1.46
MSH6-211ENST00000606499 ACY3Q96HD9 319 aa5.93□□□□□ -1.46
MSH6-211ENST00000606499 RAX2Q96IS3 184 aa5.93□□□□□ -1.46
MSH6-211ENST00000606499 CXorf58Q96LI9 332 aa5.93□□□□□ -1.46
MSH6-211ENST00000606499 C21orf62Q9NYP8 219 aa5.93□□□□□ -1.46
MSH6-211ENST00000606499 TRRAPQ9Y4A5 3859 aa5.92□□□□□ -1.46
MSH6-211ENST00000606499 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.92□□□□□ -1.46
MSH6-211ENST00000606499 TRBV7-1A0A0A6YYK4 115 aa5.92□□□□□ -1.46
MSH6-211ENST00000606499 RPS10-NUDT3A0A1W2PQS6 291 aa5.92□□□□□ -1.46
MSH6-211ENST00000606499 BMPR1BO00238 502 aa5.92□□□□□ -1.46
MSH6-211ENST00000606499 TSPAN15O95858 294 aa5.92□□□□□ -1.46
MSH6-211ENST00000606499 SLC25A4P12235 298 aa5.92□□□□□ -1.46
MSH6-211ENST00000606499 RPL12P30050 165 aaKnown RBP5.92□□□□□ -1.46
MSH6-211ENST00000606499 ARL3P36405 182 aa5.92□□□□□ -1.46
MSH6-211ENST00000606499 SULT1A1P50225 295 aa5.92□□□□□ -1.46
MSH6-211ENST00000606499 MFAP4P55083 255 aa5.92□□□□□ -1.46
MSH6-211ENST00000606499 RUNX1Q01196 453 aa5.92□□□□□ -1.46
MSH6-211ENST00000606499 NHLH2Q02577 135 aa5.92□□□□□ -1.46
MSH6-211ENST00000606499 GAMTQ14353 236 aa5.92□□□□□ -1.46
MSH6-211ENST00000606499 KRTAP21-3Q3LHN1 58 aa5.92□□□□□ -1.46
MSH6-211ENST00000606499 SHISA2Q6UWI4 295 aa5.92□□□□□ -1.46
MSH6-211ENST00000606499 STX12Q86Y82 276 aa5.92□□□□□ -1.46
MSH6-211ENST00000606499 TCTE3Q8IZS6 198 aa5.92□□□□□ -1.46
MSH6-211ENST00000606499 LILRB2Q8N423 598 aa5.92□□□□□ -1.46
MSH6-211ENST00000606499 OR11H4Q8NGC9 324 aa5.92□□□□□ -1.46
MSH6-211ENST00000606499 OR10P1Q8NGE3 313 aa5.92□□□□□ -1.46
MSH6-211ENST00000606499 NEURL2Q9BR09 285 aa5.92□□□□□ -1.46
MSH6-211ENST00000606499 CHRDL1Q9BU40 450 aa5.92□□□□□ -1.46
MSH6-211ENST00000606499 PEF1Q9UBV8 284 aaKnown RBP5.92□□□□□ -1.46
MSH6-211ENST00000606499 CMYA5Q8N3K9 4069 aa5.92□□□□□ -1.46
MSH6-211ENST00000606499 IGKV1OR2-108A0A075B7D4 117 aa5.91□□□□□ -1.46
MSH6-211ENST00000606499 IGHV3-35A0A0C4DH35 117 aa5.91□□□□□ -1.46
MSH6-211ENST00000606499 SMCO3A2RU48 225 aa5.91□□□□□ -1.46
MSH6-211ENST00000606499 RNF222A6NCQ9 220 aa5.91□□□□□ -1.46
MSH6-211ENST00000606499 TGOLN2O43493 480 aa5.91□□□□□ -1.46
MSH6-211ENST00000606499 GNG7O60262 68 aa5.91□□□□□ -1.46
MSH6-211ENST00000606499 CLEC3BP05452 202 aa5.91□□□□□ -1.46
MSH6-211ENST00000606499 ADMP35318 185 aa5.91□□□□□ -1.46
MSH6-211ENST00000606499 GPX4P36969 197 aaPredicted RBP5.91□□□□□ -1.46
MSH6-211ENST00000606499 SLURP1P55000 103 aa5.91□□□□□ -1.46
MSH6-211ENST00000606499 AKR1C1Q04828 323 aa5.91□□□□□ -1.46
MSH6-211ENST00000606499 CLINT1Q14677 625 aa5.91□□□□□ -1.46
MSH6-211ENST00000606499 ETFRF1Q6IPR1 90 aa5.91□□□□□ -1.46
MSH6-211ENST00000606499 ZNF546Q86UE3 836 aa5.91□□□□□ -1.46
MSH6-211ENST00000606499 TMEM116Q8NCL8 245 aa5.91□□□□□ -1.46
MSH6-211ENST00000606499 OR11H1Q8NG94 326 aa5.91□□□□□ -1.46
MSH6-211ENST00000606499 OR5C1Q8NGR4 320 aa5.91□□□□□ -1.46
MSH6-211ENST00000606499 OR1N2Q8NGR9 330 aa5.91□□□□□ -1.46
MSH6-211ENST00000606499 OR4X1Q8NH49 305 aa5.91□□□□□ -1.46
MSH6-211ENST00000606499 NPIPB3Q92617 1050 aa5.91□□□□□ -1.46
MSH6-211ENST00000606499 ZNF414Q96IQ9 312 aa5.91□□□□□ -1.46
MSH6-211ENST00000606499 SLC35E1Q96K37 410 aa5.91□□□□□ -1.46
MSH6-211ENST00000606499 SMIM3Q9BZL3 60 aa5.91□□□□□ -1.46
MSH6-211ENST00000606499 SLC25A31Q9H0C2 315 aa5.91□□□□□ -1.46
MSH6-211ENST00000606499 TNFSF18Q9UNG2 199 aa5.91□□□□□ -1.46
MSH6-211ENST00000606499 HSPB11Q9Y547 144 aa5.91□□□□□ -1.46
MSH6-211ENST00000606499 IGKV1D-37A0A075B6S9 117 aa5.9□□□□□ -1.46
MSH6-211ENST00000606499 UBE2L5PA0A1B0GUS4 154 aa5.9□□□□□ -1.46
MSH6-211ENST00000606499 LINC01619G3V211 115 aa5.9□□□□□ -1.46
MSH6-211ENST00000606499 CCL24O00175 119 aa5.9□□□□□ -1.46
MSH6-211ENST00000606499 ARPC5O15511 151 aa5.9□□□□□ -1.46
MSH6-211ENST00000606499 CLN5O75503 358 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms