RNA–Protein interactions for RNA: ENST00000606299.1

CSNK1A1-209, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 3 BASIC

Gene CSNK1A1, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-209ENST00000606299 AREGP15514 252 aa7.79□□□□□ -1.16
CSNK1A1-209ENST00000606299 ATP5IP56385 69 aaPredicted RBP7.79□□□□□ -1.16
CSNK1A1-209ENST00000606299 C5orf64Q2M2E5 130 aa7.79□□□□□ -1.16
CSNK1A1-209ENST00000606299 BSXQ3C1V8 233 aa7.79□□□□□ -1.16
CSNK1A1-209ENST00000606299 TMEM41BQ5BJD5 291 aa7.79□□□□□ -1.16
CSNK1A1-209ENST00000606299 FFAR4Q5NUL3 377 aa7.79□□□□□ -1.16
CSNK1A1-209ENST00000606299 DPPA3Q6W0C5 159 aa7.79□□□□□ -1.16
CSNK1A1-209ENST00000606299 IL34Q6ZMJ4 242 aa7.79□□□□□ -1.16
CSNK1A1-209ENST00000606299 SSMEM1Q8WWF3 244 aa7.79□□□□□ -1.16
CSNK1A1-209ENST00000606299 SRSF12Q8WXF0 261 aaKnown RBP7.79□□□□□ -1.16
CSNK1A1-209ENST00000606299 Q96MF0 132 aa7.79□□□□□ -1.16
CSNK1A1-209ENST00000606299 VSIRQ9H7M9 311 aa7.79□□□□□ -1.16
CSNK1A1-209ENST00000606299 USP9YO00507 2555 aaPredicted RBP7.78□□□□□ -1.16
CSNK1A1-209ENST00000606299 CHD6Q8TD26 2715 aa7.78□□□□□ -1.16
CSNK1A1-209ENST00000606299 A0A0U1RQK1 487 aa7.78□□□□□ -1.16
CSNK1A1-209ENST00000606299 RAB19A4D1S5 217 aa7.78□□□□□ -1.16
CSNK1A1-209ENST00000606299 OPRK1P41145 380 aa7.78□□□□□ -1.16
CSNK1A1-209ENST00000606299 RAB2AP61019 212 aa7.78□□□□□ -1.16
CSNK1A1-209ENST00000606299 SSBP2P81877 361 aaPredicted RBP7.78□□□□□ -1.16
CSNK1A1-209ENST00000606299 SERF2P84101 59 aa7.78□□□□□ -1.16
CSNK1A1-209ENST00000606299 FXYD3Q14802 87 aa7.78□□□□□ -1.16
CSNK1A1-209ENST00000606299 ACSM6Q6P461 480 aa7.78□□□□□ -1.16
CSNK1A1-209ENST00000606299 SLC16A13Q7RTY0 426 aa7.78□□□□□ -1.16
CSNK1A1-209ENST00000606299 Q8N6K4 173 aa7.78□□□□□ -1.16
CSNK1A1-209ENST00000606299 NARS2Q96I59 477 aaKnown RBP7.78□□□□□ -1.16
CSNK1A1-209ENST00000606299 SLC35E1Q96K37 410 aa7.78□□□□□ -1.16
CSNK1A1-209ENST00000606299 P2RX4Q99571 388 aa7.78□□□□□ -1.16
CSNK1A1-209ENST00000606299 MGST2Q99735 147 aa7.78□□□□□ -1.16
CSNK1A1-209ENST00000606299 TMEM231Q9H6L2 316 aa7.78□□□□□ -1.16
CSNK1A1-209ENST00000606299 TREM1Q9NP99 234 aa7.78□□□□□ -1.16
CSNK1A1-209ENST00000606299 RPRMQ9NS64 109 aa7.78□□□□□ -1.16
CSNK1A1-209ENST00000606299 TEX22C9J3V5 150 aa7.77□□□□□ -1.17
CSNK1A1-209ENST00000606299 MPDU1O75352 247 aa7.77□□□□□ -1.17
CSNK1A1-209ENST00000606299 TGFAP01135 160 aa7.77□□□□□ -1.17
CSNK1A1-209ENST00000606299 MDKP21741 143 aaPredicted RBP7.77□□□□□ -1.17
CSNK1A1-209ENST00000606299 GATA3P23771 443 aa7.77□□□□□ -1.17
CSNK1A1-209ENST00000606299 PTTG1IPP53801 180 aa7.77□□□□□ -1.17
CSNK1A1-209ENST00000606299 LOXL1Q08397 574 aaPredicted RBP7.77□□□□□ -1.17
CSNK1A1-209ENST00000606299 RAB31Q13636 194 aa7.77□□□□□ -1.17
CSNK1A1-209ENST00000606299 EBI3Q14213 229 aa7.77□□□□□ -1.17
CSNK1A1-209ENST00000606299 FAM122CQ6P4D5 195 aa7.77□□□□□ -1.17
CSNK1A1-209ENST00000606299 C19orf35Q6ZS72 473 aa7.77□□□□□ -1.17
CSNK1A1-209ENST00000606299 CENPVQ7Z7K6 275 aaPredicted RBP7.77□□□□□ -1.17
CSNK1A1-209ENST00000606299 EIF4E3Q8N5X7 224 aaKnown RBP7.77□□□□□ -1.17
CSNK1A1-209ENST00000606299 BPIFCQ8NFQ6 507 aa7.77□□□□□ -1.17
CSNK1A1-209ENST00000606299 RNASEH2CQ8TDP1 164 aaKnown RBP7.77□□□□□ -1.17
CSNK1A1-209ENST00000606299 ACY3Q96HD9 319 aa7.77□□□□□ -1.17
CSNK1A1-209ENST00000606299 LINC00052Q96N35 136 aa7.77□□□□□ -1.17
CSNK1A1-209ENST00000606299 GGTLC1Q9BX51 225 aa7.77□□□□□ -1.17
CSNK1A1-209ENST00000606299 SLC25A22Q9H936 323 aa7.77□□□□□ -1.17
CSNK1A1-209ENST00000606299 NPVFQ9HCQ7 196 aa7.77□□□□□ -1.17
CSNK1A1-209ENST00000606299 KCNIP2Q9NS61 270 aa7.77□□□□□ -1.17
CSNK1A1-209ENST00000606299 C1RLQ9NZP8 487 aa7.77□□□□□ -1.17
CSNK1A1-209ENST00000606299 TMA7Q9Y2S6 64 aaKnown RBP7.77□□□□□ -1.17
CSNK1A1-209ENST00000606299 FAM96BQ9Y3D0 163 aa7.77□□□□□ -1.17
CSNK1A1-209ENST00000606299 SOX21Q9Y651 276 aaPredicted RBP7.77□□□□□ -1.17
CSNK1A1-209ENST00000606299 FBN2P35556 2912 aa7.76□□□□□ -1.17
CSNK1A1-209ENST00000606299 FNDC10F2Z333 226 aa7.76□□□□□ -1.17
CSNK1A1-209ENST00000606299 IGHV3-48P01763 117 aa7.76□□□□□ -1.17
CSNK1A1-209ENST00000606299 HBE1P02100 147 aa7.76□□□□□ -1.17
CSNK1A1-209ENST00000606299 MBP02144 154 aa7.76□□□□□ -1.17
CSNK1A1-209ENST00000606299 IGHV4-31P0DP07 118 aa7.76□□□□□ -1.17
CSNK1A1-209ENST00000606299 ZP3P21754 424 aa7.76□□□□□ -1.17
CSNK1A1-209ENST00000606299 GPX4P36969 197 aaPredicted RBP7.76□□□□□ -1.17
CSNK1A1-209ENST00000606299 GAMTQ14353 236 aa7.76□□□□□ -1.17
CSNK1A1-209ENST00000606299 ACOT6Q3I5F7 207 aaPredicted RBP7.76□□□□□ -1.17
CSNK1A1-209ENST00000606299 MIC13Q5XKP0 118 aa7.76□□□□□ -1.17
CSNK1A1-209ENST00000606299 UQCC3Q6UW78 93 aa7.76□□□□□ -1.17
CSNK1A1-209ENST00000606299 LCN15Q6UWW0 184 aa7.76□□□□□ -1.17
CSNK1A1-209ENST00000606299 Q6YL49 198 aa7.76□□□□□ -1.17
CSNK1A1-209ENST00000606299 SSX7Q7RTT5 188 aa7.76□□□□□ -1.17
CSNK1A1-209ENST00000606299 COMMD1Q8N668 190 aa7.76□□□□□ -1.17
CSNK1A1-209ENST00000606299 Q8N9W7 124 aa7.76□□□□□ -1.17
CSNK1A1-209ENST00000606299 ZNF114Q8NC26 417 aa7.76□□□□□ -1.17
CSNK1A1-209ENST00000606299 LFNGQ8NES3 379 aa7.76□□□□□ -1.17
CSNK1A1-209ENST00000606299 OR10G4Q8NGN3 311 aa7.76□□□□□ -1.17
CSNK1A1-209ENST00000606299 OR10G9Q8NGN4 311 aa7.76□□□□□ -1.17
CSNK1A1-209ENST00000606299 OR10G7Q8NGN6 311 aa7.76□□□□□ -1.17
CSNK1A1-209ENST00000606299 LYPD6BQ8NI32 183 aa7.76□□□□□ -1.17
CSNK1A1-209ENST00000606299 SFT2D1Q8WV19 159 aa7.76□□□□□ -1.17
CSNK1A1-209ENST00000606299 ARPC1AQ92747 370 aa7.76□□□□□ -1.17
CSNK1A1-209ENST00000606299 RASL11BQ9BPW5 248 aa7.76□□□□□ -1.17
CSNK1A1-209ENST00000606299 FAM103A1Q9BTL3 118 aaKnown RBP7.76□□□□□ -1.17
CSNK1A1-209ENST00000606299 DKK2Q9UBU2 259 aa7.76□□□□□ -1.17
CSNK1A1-209ENST00000606299 PXMP4Q9Y6I8 212 aa7.76□□□□□ -1.17
CSNK1A1-209ENST00000606299 CSPG4Q6UVK1 2322 aa7.76□□□□□ -1.17
CSNK1A1-209ENST00000606299 TENM4Q6N022 2769 aa7.75□□□□□ -1.17
CSNK1A1-209ENST00000606299 IGHV3-21A0A0B4J1V1 117 aa7.75□□□□□ -1.17
CSNK1A1-209ENST00000606299 MAP1LC3B2A6NCE7 125 aa7.75□□□□□ -1.17
CSNK1A1-209ENST00000606299 J3QLI3 93 aa7.75□□□□□ -1.17
CSNK1A1-209ENST00000606299 EIF3GO75821 320 aaKnown RBP eCLIP7.75□□□□□ -1.17
CSNK1A1-209ENST00000606299 OR10J1P30954 320 aa7.75□□□□□ -1.17
CSNK1A1-209ENST00000606299 MFAP2P55001 183 aa7.75□□□□□ -1.17
CSNK1A1-209ENST00000606299 FGF8P55075 233 aaPredicted RBP7.75□□□□□ -1.17
CSNK1A1-209ENST00000606299 CCL20P78556 96 aa7.75□□□□□ -1.17
CSNK1A1-209ENST00000606299 ZNF726P1Q15940 193 aa7.75□□□□□ -1.17
CSNK1A1-209ENST00000606299 TMEM249Q2WGJ8 235 aa7.75□□□□□ -1.17
CSNK1A1-209ENST00000606299 KLF17Q5JT82 389 aaPredicted RBP7.75□□□□□ -1.17
CSNK1A1-209ENST00000606299 ETFRF1Q6IPR1 90 aa7.75□□□□□ -1.17
CSNK1A1-209ENST00000606299 SPSB3Q6PJ21 355 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms