RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 FABP1P07148 127 aa9.7□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 EGR2P11161 476 aaPredicted RBP9.7□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 DEFA4P12838 97 aa9.7□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 PAX6P26367 422 aa9.7□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 CDC34P49427 236 aaPredicted RBP9.7□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 NDPQ00604 133 aa9.7□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 ASPHD1Q5U4P2 390 aa9.7□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 HIST2H2BCQ6DN03 193 aa9.7□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 RPP25LQ8N5L8 163 aaKnown RBP9.7□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 STPG3Q8N7X2 389 aa9.7□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 WFDC11Q8NEX6 87 aa9.7□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 MISP3Q96FF7 219 aa9.7□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 MRPL32Q9BYC8 188 aaKnown RBP9.7□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 MAP1LC3B2A6NCE7 125 aa9.69□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 H3BUA1 57 aa9.69□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 I3L521 148 aa9.69□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 YIF1AO95070 293 aa9.69□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 MT-CO2P00403 227 aa9.69□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 IFNA1P01562 189 aa9.69□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 IGHG2P01859 326 aa9.69□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 LINC00869P0C866 280 aa9.69□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 IER3P46695 156 aa9.69□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 ELLP55199 621 aaPredicted RBP9.69□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 PLP1P60201 277 aa9.69□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 RHOBP62745 196 aa9.69□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 PEA15Q15121 130 aa9.69□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 ZNF726P1Q15940 193 aa9.69□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 C19orf54Q5BKX5 351 aa9.69□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 TOR2AQ5JU69 321 aa9.69□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 CSPG4Q6UVK1 2322 aa9.69□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 CYP2G1PQ6ZSU1 146 aa9.69□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 VN1R17PQ8TDU5 208 aa9.69□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 GATAD1Q8WUU5 269 aa9.69□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 SFT2D1Q8WV19 159 aa9.69□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 PFDN5Q99471 154 aa9.69□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 TXN2Q99757 166 aa9.69□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 MAP1LC3BQ9GZQ8 125 aa9.69□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 VSIRQ9H7M9 311 aa9.69□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 DMRT1Q9Y5R6 373 aa9.69□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 RFNGQ9Y644 331 aa9.69□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 GCN1Q92616 2671 aaKnown RBP9.69□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 UNC79Q9P2D8 2635 aa9.69□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 PDZD2O15018 2839 aa9.68□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 IGKV1D-37A0A075B6S9 117 aa9.68□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 A0A1W2PPV4 95 aa9.68□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 K7EIM0 57 aa9.68□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 CD5LO43866 347 aa9.68□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 CLN5O75503 358 aa9.68□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 AMY1AP04745 511 aa9.68□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 OR10J1P30954 320 aa9.68□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 PSMB3P49720 205 aa9.68□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 RND2P52198 227 aa9.68□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 GUK1Q16774 197 aa9.68□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 MIC13Q5XKP0 118 aa9.68□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 Q6YL49 198 aa9.68□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 TMEM86BQ8N661 226 aa9.68□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 OR1L4Q8NGR5 311 aa9.68□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 NPIPB3Q92617 1050 aa9.68□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 FANCD2OSQ96PS1 177 aa9.68□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 HSPB9Q9BQS6 159 aa9.68□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 TXNDC17Q9BRA2 123 aa9.68□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 SCRT1Q9BWW7 348 aa9.68□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 MANBALQ9NQG1 85 aa9.68□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 TMEM160Q9NX00 188 aa9.68□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 GAR1Q9NY12 217 aaKnown RBP9.68□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 ARL2-SNX15V9GYD0 113 aa9.68□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 ITPR3Q14573 2671 aa9.67□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 ELOA3CA0A087WX78 387 aaPredicted RBP9.67□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 TRBV9A0A0B4J1U6 114 aa9.67□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 ATP6V0E1O15342 81 aa9.67□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 OR5G3P0C626 314 aa9.67□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 STAG3L2P0CL84 134 aa9.67□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 STAG3L3P0CL85 134 aa9.67□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 NPBWR1P48145 328 aa9.67□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 SCGB2A2Q13296 93 aa9.67□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 DEFB112Q30KQ8 113 aa9.67□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 KHDC3LQ587J8 217 aa9.67□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 ZNF506Q5JVG8 444 aa9.67□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 C10orf91Q5T1B1 145 aa9.67□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 RBMS3Q6XE24 437 aaKnown RBP9.67□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 MAPK1IP1LQ8NDC0 245 aa9.67□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 OR2T6Q8NHC8 308 aa9.67□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 SUN5Q8TC36 379 aa9.67□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 RAB24Q969Q5 203 aa9.67□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 ACY3Q96HD9 319 aa9.67□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 VPREB3Q9UKI3 123 aa9.67□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 TMEM218A2RU14 115 aa9.66□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 PSMB11A5LHX3 300 aa9.66□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 RBFOX3A6NFN3 312 aa9.66□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 ZFP92A6NM28 416 aa9.66□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 CXorf1O96002 111 aa9.66□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 HSPB1P04792 205 aaKnown RBP9.66□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 IGLC1P0CG04 106 aa9.66□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 MFAP4P55083 255 aa9.66□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 TAS2R45P59539 299 aa9.66□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 YPEL3P61236 119 aaPredicted RBP9.66□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 FAM122CQ6P4D5 195 aa9.66□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 UNQ5815/PRO19632Q6UWF5 114 aa9.66□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 S100A7AQ86SG5 101 aa9.66□□□□□ -0.86
NEDD8-MDP1-203ENST00000604306 NECAP1Q8NC96 275 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms