RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 SBSPONQ8IVN8 264 aa8.71□□□□□ -1.02
CCDC12-209ENST00000604164 TMEM61Q8N0U2 210 aa8.71□□□□□ -1.02
CCDC12-209ENST00000604164 CENPSQ8N2Z9 138 aa8.71□□□□□ -1.02
CCDC12-209ENST00000604164 OR52B4Q8NGK2 314 aa8.71□□□□□ -1.02
CCDC12-209ENST00000604164 RNASEH2CQ8TDP1 164 aaKnown RBP8.71□□□□□ -1.02
CCDC12-209ENST00000604164 CACNG8Q8WXS5 425 aa8.71□□□□□ -1.02
CCDC12-209ENST00000604164 WDR89Q96FK6 387 aaPredicted RBP8.71□□□□□ -1.02
CCDC12-209ENST00000604164 SPAG8Q99932 426 aaPredicted RBP8.71□□□□□ -1.02
CCDC12-209ENST00000604164 C7orf50Q9BRJ6 194 aaKnown RBP8.71□□□□□ -1.02
CCDC12-209ENST00000604164 SLC25A4P12235 298 aa8.7□□□□□ -1.02
CCDC12-209ENST00000604164 SLC25A6P12236 298 aa8.7□□□□□ -1.02
CCDC12-209ENST00000604164 SUPT4H1P63272 117 aaKnown RBP8.7□□□□□ -1.02
CCDC12-209ENST00000604164 CNPY1Q3B7I2 92 aa8.7□□□□□ -1.02
CCDC12-209ENST00000604164 BSXQ3C1V8 233 aa8.7□□□□□ -1.02
CCDC12-209ENST00000604164 C2orf83Q53S99 150 aa8.7□□□□□ -1.02
CCDC12-209ENST00000604164 NMSQ5H8A3 153 aa8.7□□□□□ -1.02
CCDC12-209ENST00000604164 ZNF600Q6ZNG1 722 aa8.7□□□□□ -1.02
CCDC12-209ENST00000604164 SLC24A4Q8NFF2 622 aa8.7□□□□□ -1.02
CCDC12-209ENST00000604164 OR4X1Q8NH49 305 aa8.7□□□□□ -1.02
CCDC12-209ENST00000604164 OR10C1Q96KK4 312 aa8.7□□□□□ -1.02
CCDC12-209ENST00000604164 U3KQ87 197 aa8.7□□□□□ -1.02
CCDC12-209ENST00000604164 TRAV14DV4A0A0A6YYC5 116 aa8.69□□□□□ -1.02
CCDC12-209ENST00000604164 OR11H12B2RN74 326 aa8.69□□□□□ -1.02
CCDC12-209ENST00000604164 TSPAN4O14817 238 aa8.69□□□□□ -1.02
CCDC12-209ENST00000604164 CLN5O75503 358 aa8.69□□□□□ -1.02
CCDC12-209ENST00000604164 SCAF4O95104 1147 aaKnown RBP8.69□□□□□ -1.02
CCDC12-209ENST00000604164 CMC4P56277 68 aaPredicted RBP8.69□□□□□ -1.02
CCDC12-209ENST00000604164 TNFRSF9Q07011 255 aa8.69□□□□□ -1.02
CCDC12-209ENST00000604164 LYZL2Q7Z4W2 148 aa8.69□□□□□ -1.02
CCDC12-209ENST00000604164 LRTM2Q8N967 370 aa8.69□□□□□ -1.02
CCDC12-209ENST00000604164 TMEM116Q8NCL8 245 aa8.69□□□□□ -1.02
CCDC12-209ENST00000604164 OR1S1Q8NH92 325 aa8.69□□□□□ -1.02
CCDC12-209ENST00000604164 NARS2Q96I59 477 aaKnown RBP8.69□□□□□ -1.02
CCDC12-209ENST00000604164 RCHY1Q96PM5 261 aa8.69□□□□□ -1.02
CCDC12-209ENST00000604164 SPATA25Q9BR10 227 aa8.69□□□□□ -1.02
CCDC12-209ENST00000604164 TM2D3Q9BRN9 247 aa8.69□□□□□ -1.02
CCDC12-209ENST00000604164 TMEM231Q9H6L2 316 aa8.69□□□□□ -1.02
CCDC12-209ENST00000604164 HSPB7Q9UBY9 170 aa8.69□□□□□ -1.02
CCDC12-209ENST00000604164 TMED3Q9Y3Q3 217 aa8.69□□□□□ -1.02
CCDC12-209ENST00000604164 IGHV7-4-1A0A0J9YVY3 117 aa8.68□□□□□ -1.02
CCDC12-209ENST00000604164 OR4C46A6NHA9 309 aa8.68□□□□□ -1.02
CCDC12-209ENST00000604164 FAM90A26D6RGX4 464 aa8.68□□□□□ -1.02
CCDC12-209ENST00000604164 MED6O75586 246 aa8.68□□□□□ -1.02
CCDC12-209ENST00000604164 NDUFB6O95139 128 aa8.68□□□□□ -1.02
CCDC12-209ENST00000604164 SFT2D2O95562 160 aa8.68□□□□□ -1.02
CCDC12-209ENST00000604164 TMEM50AO95807 157 aa8.68□□□□□ -1.02
CCDC12-209ENST00000604164 IFNA10P01566 189 aa8.68□□□□□ -1.02
CCDC12-209ENST00000604164 IGHV3-48P01763 117 aa8.68□□□□□ -1.02
CCDC12-209ENST00000604164 CD7P09564 240 aa8.68□□□□□ -1.02
CCDC12-209ENST00000604164 EDN2P20800 178 aa8.68□□□□□ -1.02
CCDC12-209ENST00000604164 NPY1RP25929 384 aa8.68□□□□□ -1.02
CCDC12-209ENST00000604164 RPP30P78346 268 aaKnown RBP8.68□□□□□ -1.02
CCDC12-209ENST00000604164 LINC00299Q6ZSB3 139 aa8.68□□□□□ -1.02
CCDC12-209ENST00000604164 DTD1Q8TEA8 209 aa8.68□□□□□ -1.02
CCDC12-209ENST00000604164 SRD5A3Q9H8P0 318 aa8.68□□□□□ -1.02
CCDC12-209ENST00000604164 SMPXQ9UHP9 88 aa8.68□□□□□ -1.02
CCDC12-209ENST00000604164 A0A1W2PS18 150 aa8.67□□□□□ -1.02
CCDC12-209ENST00000604164 PAFAH1B2P68402 229 aa8.67□□□□□ -1.02
CCDC12-209ENST00000604164 PPP1R1AQ13522 171 aa8.67□□□□□ -1.02
CCDC12-209ENST00000604164 BAK1Q16611 211 aa8.67□□□□□ -1.02
CCDC12-209ENST00000604164 HAGHQ16775 308 aa8.67□□□□□ -1.02
CCDC12-209ENST00000604164 OR1S2Q8NGQ3 325 aa8.67□□□□□ -1.02
CCDC12-209ENST00000604164 COQ8AQ8NI60 647 aa8.67□□□□□ -1.02
CCDC12-209ENST00000604164 CIB3Q96Q77 187 aaPredicted RBP8.67□□□□□ -1.02
CCDC12-209ENST00000604164 FAM110AQ9BQ89 295 aa8.67□□□□□ -1.02
CCDC12-209ENST00000604164 RHPN1-AS1Q9BWJ2 59 aa8.67□□□□□ -1.02
CCDC12-209ENST00000604164 PRR13Q9NZ81 148 aa8.67□□□□□ -1.02
CCDC12-209ENST00000604164 PUS1Q9Y606 427 aaKnown RBP eCLIP8.67□□□□□ -1.02
CCDC12-209ENST00000604164 IGHV3OR16-8A0A075B7F1 116 aa8.66□□□□□ -1.02
CCDC12-209ENST00000604164 CHEK1O14757 476 aa8.66□□□□□ -1.02
CCDC12-209ENST00000604164 ZNF207O43670 478 aaKnown RBP8.66□□□□□ -1.02
CCDC12-209ENST00000604164 NXPH3O95157 252 aa8.66□□□□□ -1.02
CCDC12-209ENST00000604164 IL7P13232 177 aa8.66□□□□□ -1.02
CCDC12-209ENST00000604164 NPPCP23582 126 aa8.66□□□□□ -1.02
CCDC12-209ENST00000604164 RAB11AP62491 216 aa8.66□□□□□ -1.02
CCDC12-209ENST00000604164 TOMM20LQ6UXN7 152 aa8.66□□□□□ -1.02
CCDC12-209ENST00000604164 DEFB125Q8N687 156 aa8.66□□□□□ -1.02
CCDC12-209ENST00000604164 METTL26Q96S19 204 aa8.66□□□□□ -1.02
CCDC12-209ENST00000604164 RBKSQ9H477 322 aa8.66□□□□□ -1.02
CCDC12-209ENST00000604164 FNDC4Q9H6D8 234 aaPredicted RBP8.66□□□□□ -1.02
CCDC12-209ENST00000604164 IFNA21P01568 189 aa8.65□□□□□ -1.02
CCDC12-209ENST00000604164 IFNA4P05014 189 aa8.65□□□□□ -1.02
CCDC12-209ENST00000604164 FABP1P07148 127 aa8.65□□□□□ -1.02
CCDC12-209ENST00000604164 OR10J1P30954 320 aa8.65□□□□□ -1.02
CCDC12-209ENST00000604164 EIF2B2P49770 351 aaKnown RBP8.65□□□□□ -1.02
CCDC12-209ENST00000604164 RND2P52198 227 aa8.65□□□□□ -1.02
CCDC12-209ENST00000604164 YPEL3P61236 119 aaPredicted RBP8.65□□□□□ -1.02
CCDC12-209ENST00000604164 LINC00322Q6ZN03 302 aaPredicted RBP8.65□□□□□ -1.02
CCDC12-209ENST00000604164 Q8WTZ3 238 aa8.65□□□□□ -1.02
CCDC12-209ENST00000604164 S100ZQ8WXG8 99 aa8.65□□□□□ -1.02
CCDC12-209ENST00000604164 GRAMD2BQ96HH9 432 aa8.65□□□□□ -1.02
CCDC12-209ENST00000604164 CCDC32Q9BV29 185 aa8.65□□□□□ -1.02
CCDC12-209ENST00000604164 LOC102724200A0A096LPH7 203 aaPredicted RBP8.64□□□□□ -1.03
CCDC12-209ENST00000604164 LINC00854A0A1B0GVQ3 168 aa8.64□□□□□ -1.03
CCDC12-209ENST00000604164 C9orf170A2RU37 121 aa8.64□□□□□ -1.03
CCDC12-209ENST00000604164 C3orf84H3BNL1 204 aa8.64□□□□□ -1.03
CCDC12-209ENST00000604164 PITX3O75364 302 aa8.64□□□□□ -1.03
CCDC12-209ENST00000604164 GPX4P36969 197 aaPredicted RBP8.64□□□□□ -1.03
CCDC12-209ENST00000604164 C4orf46Q504U0 113 aa8.64□□□□□ -1.03
CCDC12-209ENST00000604164 PRSS54Q6PEW0 395 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms