RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 SGMS2Q8NHU3 365 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 MRPL30Q8TCC3 161 aaKnown RBP4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 DLX4Q92988 240 aaPredicted RBP4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 OR4C12Q96R67 309 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 EDA2RQ9HAV5 297 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 TMEM30AQ9NV96 361 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 GAGE2DQ9UEU5 116 aa4.05□□□□□ -1.76
SPTBN1-206ENST00000602898 DENND4CQ5VZ89 1909 aa4.04□□□□□ -1.76
SPTBN1-206ENST00000602898 ZNF324O75467 553 aaPredicted RBP4.04□□□□□ -1.76
SPTBN1-206ENST00000602898 KBTBD11O94819 623 aa4.04□□□□□ -1.76
SPTBN1-206ENST00000602898 CA2P00918 260 aa4.04□□□□□ -1.76
SPTBN1-206ENST00000602898 HSPE1P61604 102 aaKnown RBP4.04□□□□□ -1.76
SPTBN1-206ENST00000602898 RPL23P62829 140 aaKnown RBP4.04□□□□□ -1.76
SPTBN1-206ENST00000602898 PRDX1Q06830 199 aaKnown RBP4.04□□□□□ -1.76
SPTBN1-206ENST00000602898 DIAPH2-AS1Q14236 149 aa4.04□□□□□ -1.76
SPTBN1-206ENST00000602898 Q6Q795 121 aa4.04□□□□□ -1.76
SPTBN1-206ENST00000602898 OSR1Q8TAX0 266 aaPredicted RBP4.04□□□□□ -1.76
SPTBN1-206ENST00000602898 PIFOQ8TCI5 191 aa4.04□□□□□ -1.76
SPTBN1-206ENST00000602898 FAM103A1Q9BTL3 118 aaKnown RBP4.04□□□□□ -1.76
SPTBN1-206ENST00000602898 GNB1LQ9BYB4 327 aa4.04□□□□□ -1.76
SPTBN1-206ENST00000602898 RPRMQ9NS64 109 aa4.04□□□□□ -1.76
SPTBN1-206ENST00000602898 HEBP2Q9Y5Z4 205 aa4.04□□□□□ -1.76
SPTBN1-206ENST00000602898 PTPRSQ13332 1948 aa4.04□□□□□ -1.76
SPTBN1-206ENST00000602898 NDUFB4O95168 129 aa4.04□□□□□ -1.76
SPTBN1-206ENST00000602898 BLVRBP30043 206 aaPredicted RBP4.04□□□□□ -1.76
SPTBN1-206ENST00000602898 GAGE13Q4V321 117 aa4.04□□□□□ -1.76
SPTBN1-206ENST00000602898 MEIG1Q5JSS6 88 aa4.04□□□□□ -1.76
SPTBN1-206ENST00000602898 GOLT1AQ6ZVE7 132 aa4.04□□□□□ -1.76
SPTBN1-206ENST00000602898 RBMXL3Q8N7X1 1067 aaKnown RBP4.04□□□□□ -1.76
SPTBN1-206ENST00000602898 OR2M3Q8NG83 312 aa4.04□□□□□ -1.76
SPTBN1-206ENST00000602898 OR1L1Q8NH94 360 aa4.04□□□□□ -1.76
SPTBN1-206ENST00000602898 SSC4DQ8WTU2 575 aa4.04□□□□□ -1.76
SPTBN1-206ENST00000602898 OR5P3Q8WZ94 311 aa4.04□□□□□ -1.76
SPTBN1-206ENST00000602898 VGLL1Q99990 258 aa4.04□□□□□ -1.76
SPTBN1-206ENST00000602898 IFI27L2Q9H2X8 130 aa4.04□□□□□ -1.76
SPTBN1-206ENST00000602898 PRTFDC1Q9NRG1 225 aa4.04□□□□□ -1.76
SPTBN1-206ENST00000602898 hDV102S1A0JD36 115 aa4.03□□□□□ -1.76
SPTBN1-206ENST00000602898 MEIS3P1A6NDR6 274 aa4.03□□□□□ -1.76
SPTBN1-206ENST00000602898 SLC25A14O95258 325 aaPredicted RBP4.03□□□□□ -1.76
SPTBN1-206ENST00000602898 LINC00694P0DN24 101 aa4.03□□□□□ -1.76
SPTBN1-206ENST00000602898 COX5AP20674 150 aa4.03□□□□□ -1.76
SPTBN1-206ENST00000602898 SAA4P35542 130 aa4.03□□□□□ -1.76
SPTBN1-206ENST00000602898 TNFAIP6P98066 277 aaPredicted RBP4.03□□□□□ -1.76
SPTBN1-206ENST00000602898 PLPP4Q5VZY2 271 aa4.03□□□□□ -1.76
SPTBN1-206ENST00000602898 Q6ZS92 163 aa4.03□□□□□ -1.76
SPTBN1-206ENST00000602898 ODF3L1Q8IXM7 274 aa4.03□□□□□ -1.76
SPTBN1-206ENST00000602898 LINC00482Q8N8I6 264 aa4.03□□□□□ -1.76
SPTBN1-206ENST00000602898 C4orf45Q96LM5 186 aa4.03□□□□□ -1.76
SPTBN1-206ENST00000602898 HSD17B10Q99714 261 aaKnown RBP4.03□□□□□ -1.76
SPTBN1-206ENST00000602898 SMIM7Q9BQ49 75 aa4.03□□□□□ -1.76
SPTBN1-206ENST00000602898 INSL5Q9Y5Q6 135 aa4.03□□□□□ -1.76
SPTBN1-206ENST00000602898 NLRC5Q86WI3 1866 aa4.03□□□□□ -1.76
SPTBN1-206ENST00000602898 RBMY1BA6NDE4 496 aaKnown RBP4.03□□□□□ -1.76
SPTBN1-206ENST00000602898 RBMY1EA6NEQ0 496 aaKnown RBP4.03□□□□□ -1.76
SPTBN1-206ENST00000602898 SLC17A2O00624 439 aa4.03□□□□□ -1.76
SPTBN1-206ENST00000602898 PIN1P1O15428 100 aa4.03□□□□□ -1.76
SPTBN1-206ENST00000602898 ZNF737O75373 536 aa4.03□□□□□ -1.76
SPTBN1-206ENST00000602898 APOA2P02652 100 aa4.03□□□□□ -1.76
SPTBN1-206ENST00000602898 MRPL3P09001 348 aaKnown RBP4.03□□□□□ -1.76
SPTBN1-206ENST00000602898 RBMY1DP0C7P1 496 aaKnown RBP4.03□□□□□ -1.76
SPTBN1-206ENST00000602898 RBMY1A1P0DJD3 496 aaKnown RBP4.03□□□□□ -1.76
SPTBN1-206ENST00000602898 IFITM1P13164 125 aa4.03□□□□□ -1.76
SPTBN1-206ENST00000602898 ORM2P19652 201 aa4.03□□□□□ -1.76
SPTBN1-206ENST00000602898 CACNG7P62955 275 aa4.03□□□□□ -1.76
SPTBN1-206ENST00000602898 FOXI1Q12951 378 aa4.03□□□□□ -1.76
SPTBN1-206ENST00000602898 KCTD18Q6PI47 426 aaPredicted RBP4.03□□□□□ -1.76
SPTBN1-206ENST00000602898 C1QL2Q7Z5L3 287 aa4.03□□□□□ -1.76
SPTBN1-206ENST00000602898 RPS4Y2Q8TD47 263 aa4.03□□□□□ -1.76
SPTBN1-206ENST00000602898 EMC6Q9BV81 110 aa4.03□□□□□ -1.76
SPTBN1-206ENST00000602898 MRPL32Q9BYC8 188 aaKnown RBP4.03□□□□□ -1.76
SPTBN1-206ENST00000602898 OR2H1Q9GZK4 316 aa4.03□□□□□ -1.76
SPTBN1-206ENST00000602898 SCRT2Q9NQ03 307 aa4.03□□□□□ -1.76
SPTBN1-206ENST00000602898 MDFICQ9P1T7 246 aa4.03□□□□□ -1.76
SPTBN1-206ENST00000602898 KCNE3Q9Y6H6 103 aa4.03□□□□□ -1.76
SPTBN1-206ENST00000602898 A0A1W2PS18 150 aa4.02□□□□□ -1.77
SPTBN1-206ENST00000602898 CRXO43186 299 aaPredicted RBP4.02□□□□□ -1.77
SPTBN1-206ENST00000602898 NTN1O95631 604 aa4.02□□□□□ -1.77
SPTBN1-206ENST00000602898 APOHP02749 345 aaPredicted RBP4.02□□□□□ -1.77
SPTBN1-206ENST00000602898 G6PCP35575 357 aa4.02□□□□□ -1.77
SPTBN1-206ENST00000602898 CA7P43166 264 aa4.02□□□□□ -1.77
SPTBN1-206ENST00000602898 MS4A13Q5J8X5 152 aa4.02□□□□□ -1.77
SPTBN1-206ENST00000602898 STAC2Q6ZMT1 411 aa4.02□□□□□ -1.77
SPTBN1-206ENST00000602898 ZNF584Q8IVC4 421 aa4.02□□□□□ -1.77
SPTBN1-206ENST00000602898 ATOH7Q8N100 152 aa4.02□□□□□ -1.77
SPTBN1-206ENST00000602898 ZFP62Q8NB50 900 aaPredicted RBP4.02□□□□□ -1.77
SPTBN1-206ENST00000602898 OR8B3Q8NGG8 313 aa4.02□□□□□ -1.77
SPTBN1-206ENST00000602898 OR8B2Q96RD0 313 aa4.02□□□□□ -1.77
SPTBN1-206ENST00000602898 C20orf78Q9BR46 151 aa4.02□□□□□ -1.77
SPTBN1-206ENST00000602898 CLEC7AQ9BXN2 247 aa4.02□□□□□ -1.77
SPTBN1-206ENST00000602898 LCTP09848 1927 aa4.02□□□□□ -1.77
SPTBN1-206ENST00000602898 TRGV11A0A075B6L2 103 aa4.02□□□□□ -1.77
SPTBN1-206ENST00000602898 TRBV5-5A0A0J9YX44 114 aa4.02□□□□□ -1.77
SPTBN1-206ENST00000602898 MED19A0JLT2 244 aaPredicted RBP4.02□□□□□ -1.77
SPTBN1-206ENST00000602898 SDCBPO00560 298 aaPredicted RBP4.02□□□□□ -1.77
SPTBN1-206ENST00000602898 OR5AL1P0C617 328 aa4.02□□□□□ -1.77
SPTBN1-206ENST00000602898 KIR2DS2P43631 304 aa4.02□□□□□ -1.77
SPTBN1-206ENST00000602898 SLC38A11Q08AI6 406 aa4.02□□□□□ -1.77
SPTBN1-206ENST00000602898 ARL16Q0P5N6 197 aa4.02□□□□□ -1.77
SPTBN1-206ENST00000602898 IZUMO4Q1ZYL8 232 aa4.02□□□□□ -1.77
SPTBN1-206ENST00000602898 ZNF324BQ6AW86 544 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms