RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 LAMTOR1Q6IAA8 161 aa16.42■□□□□ 0.22
PPFIA3-208ENST00000602726 LYZL2Q7Z4W2 148 aa16.42■□□□□ 0.22
PPFIA3-208ENST00000602726 WFDC10AQ9H1F0 79 aa16.42■□□□□ 0.22
PPFIA3-208ENST00000602726 NDUFA13Q9P0J0 144 aa16.42■□□□□ 0.22
PPFIA3-208ENST00000602726 SHPKQ9UHJ6 478 aa16.42■□□□□ 0.22
PPFIA3-208ENST00000602726 PIGBOS1A0A0B4J2F0 54 aa16.41■□□□□ 0.22
PPFIA3-208ENST00000602726 NXPH3O95157 252 aa16.41■□□□□ 0.22
PPFIA3-208ENST00000602726 TMEM128Q5BJH2 165 aa16.41■□□□□ 0.22
PPFIA3-208ENST00000602726 TRIQKQ629K1 86 aa16.41■□□□□ 0.22
PPFIA3-208ENST00000602726 SRD5A3Q9H8P0 318 aa16.41■□□□□ 0.22
PPFIA3-208ENST00000602726 NBEAL2Q6ZNJ1 2754 aa16.4■□□□□ 0.22
PPFIA3-208ENST00000602726 VAMP1P23763 118 aa16.4■□□□□ 0.22
PPFIA3-208ENST00000602726 CCR6P51684 374 aa16.4■□□□□ 0.22
PPFIA3-208ENST00000602726 SMCO1Q147U7 214 aa16.4■□□□□ 0.22
PPFIA3-208ENST00000602726 NMSQ5H8A3 153 aa16.4■□□□□ 0.22
PPFIA3-208ENST00000602726 ZNF414Q96IQ9 312 aa16.4■□□□□ 0.22
PPFIA3-208ENST00000602726 OR10C1Q96KK4 312 aa16.4■□□□□ 0.22
PPFIA3-208ENST00000602726 SPAG8Q99932 426 aaPredicted RBP16.4■□□□□ 0.22
PPFIA3-208ENST00000602726 SPATA25Q9BR10 227 aa16.4■□□□□ 0.22
PPFIA3-208ENST00000602726 HIPK2Q9H2X6 1198 aa16.4■□□□□ 0.22
PPFIA3-208ENST00000602726 SMPXQ9UHP9 88 aa16.4■□□□□ 0.22
PPFIA3-208ENST00000602726 TSPAN4O14817 238 aa16.39■□□□□ 0.21
PPFIA3-208ENST00000602726 TMEM50AO95807 157 aa16.39■□□□□ 0.21
PPFIA3-208ENST00000602726 MLANAQ16655 118 aa16.39■□□□□ 0.21
PPFIA3-208ENST00000602726 TMEM116Q8NCL8 245 aa16.39■□□□□ 0.21
PPFIA3-208ENST00000602726 FNDC4Q9H6D8 234 aaPredicted RBP16.39■□□□□ 0.21
PPFIA3-208ENST00000602726 TRAV14DV4A0A0A6YYC5 116 aa16.38■□□□□ 0.21
PPFIA3-208ENST00000602726 IGHV7-4-1A0A0J9YVY3 117 aa16.38■□□□□ 0.21
PPFIA3-208ENST00000602726 RPS10-NUDT3A0A1W2PQS6 291 aa16.38■□□□□ 0.21
PPFIA3-208ENST00000602726 SCGB2A1O75556 95 aa16.38■□□□□ 0.21
PPFIA3-208ENST00000602726 BAK1Q16611 211 aa16.38■□□□□ 0.21
PPFIA3-208ENST00000602726 C2orf83Q53S99 150 aa16.38■□□□□ 0.21
PPFIA3-208ENST00000602726 TOMM20LQ6UXN7 152 aa16.38■□□□□ 0.21
PPFIA3-208ENST00000602726 LINC00322Q6ZN03 302 aaPredicted RBP16.38■□□□□ 0.21
PPFIA3-208ENST00000602726 ZNF600Q6ZNG1 722 aa16.38■□□□□ 0.21
PPFIA3-208ENST00000602726 SLC24A4Q8NFF2 622 aa16.38■□□□□ 0.21
PPFIA3-208ENST00000602726 GINS3Q9BRX5 216 aa16.38■□□□□ 0.21
PPFIA3-208ENST00000602726 RHPN1-AS1Q9BWJ2 59 aa16.38■□□□□ 0.21
PPFIA3-208ENST00000602726 IGHV3-49A0A0A0MS15 119 aa16.37■□□□□ 0.21
PPFIA3-208ENST00000602726 RBMY1BA6NDE4 496 aaKnown RBP16.37■□□□□ 0.21
PPFIA3-208ENST00000602726 RBMY1EA6NEQ0 496 aaKnown RBP16.37■□□□□ 0.21
PPFIA3-208ENST00000602726 CLN5O75503 358 aa16.37■□□□□ 0.21
PPFIA3-208ENST00000602726 RBMY1DP0C7P1 496 aaKnown RBP16.37■□□□□ 0.21
PPFIA3-208ENST00000602726 TNFRSF9Q07011 255 aa16.37■□□□□ 0.21
PPFIA3-208ENST00000602726 RBMS2Q15434 407 aaKnown RBP16.37■□□□□ 0.21
PPFIA3-208ENST00000602726 NOXA1Q86UR1 476 aa16.37■□□□□ 0.21
PPFIA3-208ENST00000602726 CENPSQ8N2Z9 138 aa16.37■□□□□ 0.21
PPFIA3-208ENST00000602726 OR4X1Q8NH49 305 aa16.37■□□□□ 0.21
PPFIA3-208ENST00000602726 OR1S1Q8NH92 325 aa16.37■□□□□ 0.21
PPFIA3-208ENST00000602726 RNASEH2CQ8TDP1 164 aaKnown RBP16.37■□□□□ 0.21
PPFIA3-208ENST00000602726 MRPL36Q9P0J6 103 aaKnown RBP16.37■□□□□ 0.21
PPFIA3-208ENST00000602726 PUS1Q9Y606 427 aaKnown RBP eCLIP16.37■□□□□ 0.21
PPFIA3-208ENST00000602726 A0A1B0GU03 582 aa16.36■□□□□ 0.21
PPFIA3-208ENST00000602726 DUXBA0A1W2PPF3 345 aa16.36■□□□□ 0.21
PPFIA3-208ENST00000602726 NAP1L6A6NFF2 107 aa16.36■□□□□ 0.21
PPFIA3-208ENST00000602726 CHEK1O14757 476 aa16.36■□□□□ 0.21
PPFIA3-208ENST00000602726 NPY1RP25929 384 aa16.36■□□□□ 0.21
PPFIA3-208ENST00000602726 RNF2Q99496 336 aa16.36■□□□□ 0.21
PPFIA3-208ENST00000602726 HSPB7Q9UBY9 170 aa16.36■□□□□ 0.21
PPFIA3-208ENST00000602726 LINC00854A0A1B0GVQ3 168 aa16.35■□□□□ 0.21
PPFIA3-208ENST00000602726 OR4C46A6NHA9 309 aa16.35■□□□□ 0.21
PPFIA3-208ENST00000602726 SFT2D2O95562 160 aa16.35■□□□□ 0.21
PPFIA3-208ENST00000602726 BMI1P35226 326 aa16.35■□□□□ 0.21
PPFIA3-208ENST00000602726 PPP1R1AQ13522 171 aa16.35■□□□□ 0.21
PPFIA3-208ENST00000602726 DTD1Q8TEA8 209 aa16.35■□□□□ 0.21
PPFIA3-208ENST00000602726 RBKSQ9H477 322 aa16.35■□□□□ 0.21
PPFIA3-208ENST00000602726 IGHV3OR16-13A0A075B7E8 117 aa16.34■□□□□ 0.21
PPFIA3-208ENST00000602726 TRAV30A0A087WSZ9 112 aa16.34■□□□□ 0.21
PPFIA3-208ENST00000602726 IGHV3-74A0A0B4J1X5 117 aa16.34■□□□□ 0.21
PPFIA3-208ENST00000602726 IFNA10P01566 189 aa16.34■□□□□ 0.21
PPFIA3-208ENST00000602726 SLC25A4P12235 298 aa16.34■□□□□ 0.21
PPFIA3-208ENST00000602726 LRTM2Q8N967 370 aa16.34■□□□□ 0.21
PPFIA3-208ENST00000602726 U3KQ87 197 aa16.34■□□□□ 0.21
PPFIA3-208ENST00000602726 CENPXA8MT69 81 aa16.33■□□□□ 0.2
PPFIA3-208ENST00000602726 ETFRF1Q6IPR1 90 aa16.33■□□□□ 0.2
PPFIA3-208ENST00000602726 PRSS54Q6PEW0 395 aa16.33■□□□□ 0.2
PPFIA3-208ENST00000602726 TMEM170AQ8WVE7 144 aa16.33■□□□□ 0.2
PPFIA3-208ENST00000602726 CITED4Q96RK1 184 aa16.33■□□□□ 0.2
PPFIA3-208ENST00000602726 SDHCQ99643 169 aaPredicted RBP16.33■□□□□ 0.2
PPFIA3-208ENST00000602726 ZFAND3Q9H8U3 227 aa16.33■□□□□ 0.2
PPFIA3-208ENST00000602726 UBQLN2Q9UHD9 624 aa16.33■□□□□ 0.2
PPFIA3-208ENST00000602726 NDUFB6O95139 128 aa16.32■□□□□ 0.2
PPFIA3-208ENST00000602726 RND2P52198 227 aa16.32■□□□□ 0.2
PPFIA3-208ENST00000602726 UBE2MP61081 183 aaKnown RBP16.32■□□□□ 0.2
PPFIA3-208ENST00000602726 TIGITQ495A1 244 aa16.32■□□□□ 0.2
PPFIA3-208ENST00000602726 TMED3Q9Y3Q3 217 aa16.32■□□□□ 0.2
PPFIA3-208ENST00000602726 IGKV3-7A0A075B6H7 116 aa16.31■□□□□ 0.2
PPFIA3-208ENST00000602726 LOC102724200A0A096LPH7 203 aaPredicted RBP16.31■□□□□ 0.2
PPFIA3-208ENST00000602726 C3orf84H3BNL1 204 aa16.31■□□□□ 0.2
PPFIA3-208ENST00000602726 IGKV1-17P01599 117 aa16.31■□□□□ 0.2
PPFIA3-208ENST00000602726 IL7P13232 177 aa16.31■□□□□ 0.2
PPFIA3-208ENST00000602726 MUC7Q8TAX7 377 aa16.31■□□□□ 0.2
PPFIA3-208ENST00000602726 GGTLC1Q9BX51 225 aa16.31■□□□□ 0.2
PPFIA3-208ENST00000602726 RETNQ9HD89 108 aa16.31■□□□□ 0.2
PPFIA3-208ENST00000602726 PITX3O75364 302 aa16.3■□□□□ 0.2
PPFIA3-208ENST00000602726 APOHP02749 345 aaPredicted RBP16.3■□□□□ 0.2
PPFIA3-208ENST00000602726 CD5P06127 495 aa16.3■□□□□ 0.2
PPFIA3-208ENST00000602726 SLC25A6P12236 298 aa16.3■□□□□ 0.2
PPFIA3-208ENST00000602726 NPPCP23582 126 aa16.3■□□□□ 0.2
PPFIA3-208ENST00000602726 OR10J1P30954 320 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms