RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 HOXA1P49639 335 aaPredicted RBP9.6□□□□□ -0.87
RPS28-204ENST00000602140 RORCP51449 518 aa9.6□□□□□ -0.87
RPS28-204ENST00000602140 PPP5CP53041 499 aa9.6□□□□□ -0.87
RPS28-204ENST00000602140 MLANAQ16655 118 aa9.6□□□□□ -0.87
RPS28-204ENST00000602140 TRIM16LQ309B1 348 aa9.6□□□□□ -0.87
RPS28-204ENST00000602140 SP6Q3SY56 376 aa9.6□□□□□ -0.87
RPS28-204ENST00000602140 MZT2AQ6P582 158 aa9.6□□□□□ -0.87
RPS28-204ENST00000602140 ARRDC1Q8N5I2 433 aa9.6□□□□□ -0.87
RPS28-204ENST00000602140 OR52I2Q8NH67 350 aa9.6□□□□□ -0.87
RPS28-204ENST00000602140 FNDC4Q9H6D8 234 aaPredicted RBP9.6□□□□□ -0.87
RPS28-204ENST00000602140 ENY2Q9NPA8 101 aa9.6□□□□□ -0.87
RPS28-204ENST00000602140 DNAH10Q8IVF4 4471 aa9.6□□□□□ -0.87
RPS28-204ENST00000602140 A0A0G2JRQ6 117 aa9.59□□□□□ -0.87
RPS28-204ENST00000602140 A0A1W2PS18 150 aa9.59□□□□□ -0.87
RPS28-204ENST00000602140 CLN5O75503 358 aa9.59□□□□□ -0.87
RPS28-204ENST00000602140 STXBP6Q8NFX7 210 aa9.59□□□□□ -0.87
RPS28-204ENST00000602140 OR4D10Q8NGI6 311 aa9.59□□□□□ -0.87
RPS28-204ENST00000602140 OR4X1Q8NH49 305 aa9.59□□□□□ -0.87
RPS28-204ENST00000602140 RNASE11Q8TAA1 199 aaKnown RBP9.59□□□□□ -0.87
RPS28-204ENST00000602140 ZFAND1Q8TCF1 268 aa9.59□□□□□ -0.87
RPS28-204ENST00000602140 C2CD4CQ8TF44 421 aa9.59□□□□□ -0.87
RPS28-204ENST00000602140 RRNAD1Q96FB5 475 aaKnown RBP9.59□□□□□ -0.87
RPS28-204ENST00000602140 METTL26Q96S19 204 aa9.59□□□□□ -0.87
RPS28-204ENST00000602140 COPZ2Q9P299 210 aa9.59□□□□□ -0.87
RPS28-204ENST00000602140 MTFP1Q9UDX5 166 aa9.59□□□□□ -0.87
RPS28-204ENST00000602140 K7EQG2 157 aa9.58□□□□□ -0.88
RPS28-204ENST00000602140 TBPP20226 339 aa9.58□□□□□ -0.88
RPS28-204ENST00000602140 CRYBB3P26998 211 aa9.58□□□□□ -0.88
RPS28-204ENST00000602140 RPL5P46777 297 aaKnown RBP9.58□□□□□ -0.88
RPS28-204ENST00000602140 P2RY1P47900 373 aa9.58□□□□□ -0.88
RPS28-204ENST00000602140 CCDC71LQ8N9Z2 235 aa9.58□□□□□ -0.88
RPS28-204ENST00000602140 OR13C8Q8NGS7 320 aa9.58□□□□□ -0.88
RPS28-204ENST00000602140 TERB2Q8NHR7 220 aa9.58□□□□□ -0.88
RPS28-204ENST00000602140 TMEM230Q96A57 120 aa9.58□□□□□ -0.88
RPS28-204ENST00000602140 ABHD1Q96SE0 405 aa9.58□□□□□ -0.88
RPS28-204ENST00000602140 EXTL2Q9UBQ6 330 aa9.58□□□□□ -0.88
RPS28-204ENST00000602140 VPS13DQ5THJ4 4388 aa9.58□□□□□ -0.88
RPS28-204ENST00000602140 KNCNA6PVL3 124 aa9.57□□□□□ -0.88
RPS28-204ENST00000602140 SCGB2A1O75556 95 aa9.57□□□□□ -0.88
RPS28-204ENST00000602140 IGKV1-17P01599 117 aa9.57□□□□□ -0.88
RPS28-204ENST00000602140 GIG44P09565 113 aaPredicted RBP9.57□□□□□ -0.88
RPS28-204ENST00000602140 ZNF688P0C7X2 276 aa9.57□□□□□ -0.88
RPS28-204ENST00000602140 UCP1P25874 307 aa9.57□□□□□ -0.88
RPS28-204ENST00000602140 PRR20EP86478 221 aa9.57□□□□□ -0.88
RPS28-204ENST00000602140 PRR20CP86479 221 aa9.57□□□□□ -0.88
RPS28-204ENST00000602140 PRR20DP86480 221 aa9.57□□□□□ -0.88
RPS28-204ENST00000602140 PRR20BP86481 221 aa9.57□□□□□ -0.88
RPS28-204ENST00000602140 PRR20AP86496 221 aa9.57□□□□□ -0.88
RPS28-204ENST00000602140 BSXQ3C1V8 233 aa9.57□□□□□ -0.88
RPS28-204ENST00000602140 TIGITQ495A1 244 aa9.57□□□□□ -0.88
RPS28-204ENST00000602140 SCGB2B2Q4G0G5 96 aa9.57□□□□□ -0.88
RPS28-204ENST00000602140 Q6ZRM9 215 aa9.57□□□□□ -0.88
RPS28-204ENST00000602140 TRPT1Q86TN4 253 aaKnown RBP9.57□□□□□ -0.88
RPS28-204ENST00000602140 Q8NAQ8 132 aa9.57□□□□□ -0.88
RPS28-204ENST00000602140 MARCH1Q8TCQ1 289 aa9.57□□□□□ -0.88
RPS28-204ENST00000602140 AP3S1Q92572 193 aa9.57□□□□□ -0.88
RPS28-204ENST00000602140 GRAMD2BQ96HH9 432 aa9.57□□□□□ -0.88
RPS28-204ENST00000602140 NARS2Q96I59 477 aaKnown RBP9.57□□□□□ -0.88
RPS28-204ENST00000602140 IGHV4-28A0A0C4DH34 117 aa9.56□□□□□ -0.88
RPS28-204ENST00000602140 IGLL5B9A064 214 aa9.56□□□□□ -0.88
RPS28-204ENST00000602140 RAB3DO95716 219 aa9.56□□□□□ -0.88
RPS28-204ENST00000602140 CD74P04233 296 aa9.56□□□□□ -0.88
RPS28-204ENST00000602140 RBMY1A1P0DJD3 496 aaKnown RBP9.56□□□□□ -0.88
RPS28-204ENST00000602140 RBMY1CP0DJD4 496 aa9.56□□□□□ -0.88
RPS28-204ENST00000602140 SPP1P10451 314 aa9.56□□□□□ -0.88
RPS28-204ENST00000602140 ZNF182P17025 639 aaPredicted RBP9.56□□□□□ -0.88
RPS28-204ENST00000602140 TCTAP57738 103 aa9.56□□□□□ -0.88
RPS28-204ENST00000602140 SPCS3P61009 180 aa9.56□□□□□ -0.88
RPS28-204ENST00000602140 RBMY1FQ15415 496 aaKnown RBP9.56□□□□□ -0.88
RPS28-204ENST00000602140 MORN3Q6PF18 240 aaPredicted RBP9.56□□□□□ -0.88
RPS28-204ENST00000602140 TMEM229BQ8NBD8 167 aa9.56□□□□□ -0.88
RPS28-204ENST00000602140 DCANP1Q8TF63 244 aa9.56□□□□□ -0.88
RPS28-204ENST00000602140 NAA50Q9GZZ1 169 aaKnown RBP9.56□□□□□ -0.88
RPS28-204ENST00000602140 TRAV30A0A087WSZ9 112 aa9.55□□□□□ -0.88
RPS28-204ENST00000602140 RPS10-NUDT3A0A1W2PQS6 291 aa9.55□□□□□ -0.88
RPS28-204ENST00000602140 C11orf94C9JXX5 98 aa9.55□□□□□ -0.88
RPS28-204ENST00000602140 B3GALNT1O75752 331 aa9.55□□□□□ -0.88
RPS28-204ENST00000602140 CDS2O95674 445 aa9.55□□□□□ -0.88
RPS28-204ENST00000602140 OR5AC1P0C628 307 aa9.55□□□□□ -0.88
RPS28-204ENST00000602140 C4BPBP20851 252 aa9.55□□□□□ -0.88
RPS28-204ENST00000602140 HTR2BP41595 481 aa9.55□□□□□ -0.88
RPS28-204ENST00000602140 TAS2R19P59542 299 aa9.55□□□□□ -0.88
RPS28-204ENST00000602140 CTF1Q16619 201 aa9.55□□□□□ -0.88
RPS28-204ENST00000602140 TMEM41BQ5BJD5 291 aa9.55□□□□□ -0.88
RPS28-204ENST00000602140 ACTL10Q5JWF8 245 aa9.55□□□□□ -0.88
RPS28-204ENST00000602140 STEAP1BQ6NZ63 245 aa9.55□□□□□ -0.88
RPS28-204ENST00000602140 FAM219AQ8IW50 185 aa9.55□□□□□ -0.88
RPS28-204ENST00000602140 TMEM222Q9H0R3 208 aa9.55□□□□□ -0.88
RPS28-204ENST00000602140 HRH4Q9H3N8 390 aa9.55□□□□□ -0.88
RPS28-204ENST00000602140 HEYLQ9NQ87 328 aaPredicted RBP9.55□□□□□ -0.88
RPS28-204ENST00000602140 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.55□□□□□ -0.88
RPS28-204ENST00000602140 APLNQ9ULZ1 77 aa9.55□□□□□ -0.88
RPS28-204ENST00000602140 TEX13DA0A0J9YY54 714 aaPredicted RBP9.54□□□□□ -0.88
RPS28-204ENST00000602140 ZNF705EA8MWA4 302 aaPredicted RBP9.54□□□□□ -0.88
RPS28-204ENST00000602140 GABARAPO95166 117 aa9.54□□□□□ -0.88
RPS28-204ENST00000602140 IGLC1P0CG04 106 aa9.54□□□□□ -0.88
RPS28-204ENST00000602140 MIFP14174 115 aa9.54□□□□□ -0.88
RPS28-204ENST00000602140 HLA-DMBP28068 263 aa9.54□□□□□ -0.88
RPS28-204ENST00000602140 EIF2B2P49770 351 aaKnown RBP9.54□□□□□ -0.88
RPS28-204ENST00000602140 RND2P52198 227 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms