RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 ELLP55199 621 aaPredicted RBP14.15□□□□□ -0.14
VRK3-225ENST00000601912 Q6ZRG5 221 aa14.15□□□□□ -0.14
VRK3-225ENST00000601912 TMEM86BQ8N661 226 aa14.15□□□□□ -0.14
VRK3-225ENST00000601912 FAM213BQ8TBF2 198 aa14.15□□□□□ -0.14
VRK3-225ENST00000601912 GGTLC1Q9BX51 225 aa14.15□□□□□ -0.14
VRK3-225ENST00000601912 LINC00862A6NCI5 91 aa14.14□□□□□ -0.15
VRK3-225ENST00000601912 G3V318 75 aa14.14□□□□□ -0.15
VRK3-225ENST00000601912 TMEM41BQ5BJD5 291 aa14.14□□□□□ -0.15
VRK3-225ENST00000601912 FFAR4Q5NUL3 377 aa14.14□□□□□ -0.15
VRK3-225ENST00000601912 TMEM116Q8NCL8 245 aa14.14□□□□□ -0.15
VRK3-225ENST00000601912 FANCD2OSQ96PS1 177 aa14.14□□□□□ -0.15
VRK3-225ENST00000601912 IGHV3-21A0A0B4J1V1 117 aa14.14□□□□□ -0.15
VRK3-225ENST00000601912 AP4M1O00189 453 aa14.14□□□□□ -0.15
VRK3-225ENST00000601912 TSPAN15O95858 294 aa14.14□□□□□ -0.15
VRK3-225ENST00000601912 ZNF616Q08AN1 781 aa14.14□□□□□ -0.15
VRK3-225ENST00000601912 PXDC1Q5TGL8 231 aa14.14□□□□□ -0.15
VRK3-225ENST00000601912 ACSM6Q6P461 480 aa14.14□□□□□ -0.15
VRK3-225ENST00000601912 SLC7A5P1Q8MH63 180 aa14.14□□□□□ -0.15
VRK3-225ENST00000601912 CXorf58Q96LI9 332 aa14.14□□□□□ -0.15
VRK3-225ENST00000601912 ZNF355PQ9NSJ1 428 aa14.14□□□□□ -0.15
VRK3-225ENST00000601912 PFDN2Q9UHV9 154 aa14.14□□□□□ -0.15
VRK3-225ENST00000601912 PXMP4Q9Y6I8 212 aa14.14□□□□□ -0.15
VRK3-225ENST00000601912 IGKV1OR2-108A0A075B7D4 117 aa14.13□□□□□ -0.15
VRK3-225ENST00000601912 ZFP92A6NM28 416 aa14.13□□□□□ -0.15
VRK3-225ENST00000601912 K7EIM0 57 aa14.13□□□□□ -0.15
VRK3-225ENST00000601912 LY6G6DO95868 133 aa14.13□□□□□ -0.15
VRK3-225ENST00000601912 FOSL1P15407 271 aa14.13□□□□□ -0.15
VRK3-225ENST00000601912 OR10J1P30954 320 aa14.13□□□□□ -0.15
VRK3-225ENST00000601912 RPL29P47914 159 aaKnown RBP14.13□□□□□ -0.15
VRK3-225ENST00000601912 FHITP49789 147 aa14.13□□□□□ -0.15
VRK3-225ENST00000601912 ACOT6Q3I5F7 207 aaPredicted RBP14.13□□□□□ -0.15
VRK3-225ENST00000601912 THAP8Q8NA92 274 aa14.13□□□□□ -0.15
VRK3-225ENST00000601912 SMR3AQ99954 134 aa14.13□□□□□ -0.15
VRK3-225ENST00000601912 NPFFR1Q9GZQ6 430 aa14.13□□□□□ -0.15
VRK3-225ENST00000601912 RPRMQ9NS64 109 aa14.13□□□□□ -0.15
VRK3-225ENST00000601912 CD99P14209 185 aa14.12□□□□□ -0.15
VRK3-225ENST00000601912 B2MP61769 119 aa14.12□□□□□ -0.15
VRK3-225ENST00000601912 MIC13Q5XKP0 118 aa14.12□□□□□ -0.15
VRK3-225ENST00000601912 OR4X1Q8NH49 305 aa14.12□□□□□ -0.15
VRK3-225ENST00000601912 PRSS22Q9GZN4 317 aa14.12□□□□□ -0.15
VRK3-225ENST00000601912 MED9Q9NWA0 146 aa14.12□□□□□ -0.15
VRK3-225ENST00000601912 MRPL36Q9P0J6 103 aaKnown RBP14.12□□□□□ -0.15
VRK3-225ENST00000601912 SLC45A2Q9UMX9 530 aa14.12□□□□□ -0.15
VRK3-225ENST00000601912 SONP18583 2426 aaKnown RBP14.12□□□□□ -0.15
VRK3-225ENST00000601912 OR2J3O76001 311 aa14.11□□□□□ -0.15
VRK3-225ENST00000601912 M6PRP20645 277 aa14.11□□□□□ -0.15
VRK3-225ENST00000601912 KLK9Q2XQG4 91 aa14.11□□□□□ -0.15
VRK3-225ENST00000601912 STPG3Q8N7X2 389 aa14.11□□□□□ -0.15
VRK3-225ENST00000601912 HRH4Q9H3N8 390 aa14.11□□□□□ -0.15
VRK3-225ENST00000601912 VSIRQ9H7M9 311 aa14.11□□□□□ -0.15
VRK3-225ENST00000601912 LINC00527Q9UJ94 153 aa14.11□□□□□ -0.15
VRK3-225ENST00000601912 FBXL7Q9UJT9 491 aa14.11□□□□□ -0.15
VRK3-225ENST00000601912 KLK9Q9UKQ9 250 aa14.11□□□□□ -0.15
VRK3-225ENST00000601912 TCRBV4S1A1TA0A5B7 111 aa14.1□□□□□ -0.15
VRK3-225ENST00000601912 H2AFB1P0C5Y9 115 aa14.1□□□□□ -0.15
VRK3-225ENST00000601912 SELENOTP62341 195 aa14.1□□□□□ -0.15
VRK3-225ENST00000601912 C19orf54Q5BKX5 351 aa14.1□□□□□ -0.15
VRK3-225ENST00000601912 Q6ZS46 218 aa14.1□□□□□ -0.15
VRK3-225ENST00000601912 CYP2G1PQ6ZSU1 146 aa14.1□□□□□ -0.15
VRK3-225ENST00000601912 OR10G4Q8NGN3 311 aa14.1□□□□□ -0.15
VRK3-225ENST00000601912 OR10G9Q8NGN4 311 aa14.1□□□□□ -0.15
VRK3-225ENST00000601912 OR10G7Q8NGN6 311 aa14.1□□□□□ -0.15
VRK3-225ENST00000601912 SLC39A9Q9NUM3 307 aa14.1□□□□□ -0.15
VRK3-225ENST00000601912 ZNF580Q9UK33 172 aa14.1□□□□□ -0.15
VRK3-225ENST00000601912 CDC42EP3Q9UKI2 254 aa14.1□□□□□ -0.15
VRK3-225ENST00000601912 FLNBO75369 2602 aaKnown RBP14.1□□□□□ -0.15
VRK3-225ENST00000601912 TEX46H3BTG2 121 aa14.1□□□□□ -0.15
VRK3-225ENST00000601912 SRD5A1P18405 259 aa14.1□□□□□ -0.15
VRK3-225ENST00000601912 NPBWR1P48145 328 aa14.1□□□□□ -0.15
VRK3-225ENST00000601912 MFAP4P55083 255 aa14.1□□□□□ -0.15
VRK3-225ENST00000601912 RAB2AP61019 212 aa14.1□□□□□ -0.15
VRK3-225ENST00000601912 PRR20EP86478 221 aa14.1□□□□□ -0.15
VRK3-225ENST00000601912 PRR20CP86479 221 aa14.1□□□□□ -0.15
VRK3-225ENST00000601912 PRR20DP86480 221 aa14.1□□□□□ -0.15
VRK3-225ENST00000601912 PRR20BP86481 221 aa14.1□□□□□ -0.15
VRK3-225ENST00000601912 PRR20AP86496 221 aa14.1□□□□□ -0.15
VRK3-225ENST00000601912 COMMD7Q86VX2 200 aa14.1□□□□□ -0.15
VRK3-225ENST00000601912 NECAP1Q8NC96 275 aa14.1□□□□□ -0.15
VRK3-225ENST00000601912 BPIFCQ8NFQ6 507 aa14.1□□□□□ -0.15
VRK3-225ENST00000601912 TRGV9Q99603 122 aa14.1□□□□□ -0.15
VRK3-225ENST00000601912 MXRA5Q9NR99 2828 aa14.09□□□□□ -0.15
VRK3-225ENST00000601912 IGKV1D-37A0A075B6S9 117 aa14.09□□□□□ -0.15
VRK3-225ENST00000601912 CLN5O75503 358 aa14.09□□□□□ -0.15
VRK3-225ENST00000601912 NDUFB8O95169 186 aa14.09□□□□□ -0.15
VRK3-225ENST00000601912 RHOGP84095 191 aa14.09□□□□□ -0.15
VRK3-225ENST00000601912 VN1R17PQ8TDU5 208 aa14.09□□□□□ -0.15
VRK3-225ENST00000601912 NOL4LQ96MY1 436 aaPredicted RBP14.09□□□□□ -0.15
VRK3-225ENST00000601912 DUX5Q96PT3 197 aa14.09□□□□□ -0.15
VRK3-225ENST00000601912 ACTR3CQ9C0K3 210 aaPredicted RBP14.09□□□□□ -0.15
VRK3-225ENST00000601912 C21orf62Q9NYP8 219 aa14.09□□□□□ -0.15
VRK3-225ENST00000601912 OTOGQ6ZRI0 2925 aa14.09□□□□□ -0.15
VRK3-225ENST00000601912 TRAV30A0A087WSZ9 112 aa14.08□□□□□ -0.16
VRK3-225ENST00000601912 TRBV9A0A0B4J1U6 114 aa14.08□□□□□ -0.16
VRK3-225ENST00000601912 NUDT19A8MXV4 375 aa14.08□□□□□ -0.16
VRK3-225ENST00000601912 H3BUA1 57 aa14.08□□□□□ -0.16
VRK3-225ENST00000601912 SCGB2A1O75556 95 aa14.08□□□□□ -0.16
VRK3-225ENST00000601912 RPP25LQ8N5L8 163 aaKnown RBP14.08□□□□□ -0.16
VRK3-225ENST00000601912 LYPD6BQ8NI32 183 aa14.08□□□□□ -0.16
VRK3-225ENST00000601912 SFT2D1Q8WV19 159 aa14.08□□□□□ -0.16
VRK3-225ENST00000601912 RCC1LQ96I51 464 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms