RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 MRPL27Q9P0M9 148 aaKnown RBP2.88□□□□□ -1.95
VRK3-222ENST00000601324 ZNF221Q9UK13 617 aa2.88□□□□□ -1.95
VRK3-222ENST00000601324 WASHC3Q9Y3C0 194 aa2.88□□□□□ -1.95
VRK3-222ENST00000601324 A0A1W2PQL4 384 aaPredicted RBP2.87□□□□□ -1.95
VRK3-222ENST00000601324 AIPO00170 330 aa2.87□□□□□ -1.95
VRK3-222ENST00000601324 ITGB1BP1O14713 200 aa2.87□□□□□ -1.95
VRK3-222ENST00000601324 EDF1O60869 148 aaKnown RBP2.87□□□□□ -1.95
VRK3-222ENST00000601324 SULT1C4O75897 302 aa2.87□□□□□ -1.95
VRK3-222ENST00000601324 RPP14O95059 124 aaKnown RBP2.87□□□□□ -1.95
VRK3-222ENST00000601324 CA1P00915 261 aaPredicted RBP2.87□□□□□ -1.95
VRK3-222ENST00000601324 IFNA21P01568 189 aa2.87□□□□□ -1.95
VRK3-222ENST00000601324 IFNA17P01571 189 aa2.87□□□□□ -1.95
VRK3-222ENST00000601324 UBCP0CG48 685 aaKnown RBP2.87□□□□□ -1.95
VRK3-222ENST00000601324 LGALS7P47929 136 aa2.87□□□□□ -1.95
VRK3-222ENST00000601324 MED21Q13503 144 aa2.87□□□□□ -1.95
VRK3-222ENST00000601324 PLGLAQ15195 96 aa2.87□□□□□ -1.95
VRK3-222ENST00000601324 HMGN3Q15651 99 aa2.87□□□□□ -1.95
VRK3-222ENST00000601324 MPV17LQ2QL34 196 aa2.87□□□□□ -1.95
VRK3-222ENST00000601324 TIGITQ495A1 244 aa2.87□□□□□ -1.95
VRK3-222ENST00000601324 C19orf35Q6ZS72 473 aa2.87□□□□□ -1.95
VRK3-222ENST00000601324 HSD17B13Q7Z5P4 300 aaPredicted RBP2.87□□□□□ -1.95
VRK3-222ENST00000601324 SLC35F2Q8IXU6 374 aa2.87□□□□□ -1.95
VRK3-222ENST00000601324 C15orf54Q8N8G6 183 aa2.87□□□□□ -1.95
VRK3-222ENST00000601324 OR51A2Q8NGJ7 313 aa2.87□□□□□ -1.95
VRK3-222ENST00000601324 OR2G2Q8NGZ5 317 aa2.87□□□□□ -1.95
VRK3-222ENST00000601324 OR4K15Q8NH41 348 aa2.87□□□□□ -1.95
VRK3-222ENST00000601324 TEX47Q8TBZ9 253 aa2.87□□□□□ -1.95
VRK3-222ENST00000601324 THRSPQ92748 146 aa2.87□□□□□ -1.95
VRK3-222ENST00000601324 MRPS24Q96EL2 167 aaKnown RBP2.87□□□□□ -1.95
VRK3-222ENST00000601324 C4orf36Q96KX1 117 aa2.87□□□□□ -1.95
VRK3-222ENST00000601324 IL4I1Q96RQ9 567 aa2.87□□□□□ -1.95
VRK3-222ENST00000601324 CNN2Q99439 309 aaKnown RBP2.87□□□□□ -1.95
VRK3-222ENST00000601324 TSNAXQ99598 290 aaKnown RBP2.87□□□□□ -1.95
VRK3-222ENST00000601324 TAF9BQ9HBM6 251 aa2.87□□□□□ -1.95
VRK3-222ENST00000601324 OR2S2Q9NQN1 319 aa2.87□□□□□ -1.95
VRK3-222ENST00000601324 COA4Q9NYJ1 87 aa2.87□□□□□ -1.95
VRK3-222ENST00000601324 NKIRAS1Q9NYS0 192 aa2.87□□□□□ -1.95
VRK3-222ENST00000601324 ST3GAL6Q9Y274 331 aa2.87□□□□□ -1.95
VRK3-222ENST00000601324 V9GYQ6 96 aa2.87□□□□□ -1.95
VRK3-222ENST00000601324 METTL15A6NJ78 407 aa2.86□□□□□ -1.95
VRK3-222ENST00000601324 OR4C45A6NMZ5 311 aa2.86□□□□□ -1.95
VRK3-222ENST00000601324 E7EUB6 86 aa2.86□□□□□ -1.95
VRK3-222ENST00000601324 H3BMQ9 156 aa2.86□□□□□ -1.95
VRK3-222ENST00000601324 RAB29O14966 203 aa2.86□□□□□ -1.95
VRK3-222ENST00000601324 TGOLN2O43493 480 aa2.86□□□□□ -1.95
VRK3-222ENST00000601324 PRKYO43930 277 aa2.86□□□□□ -1.95
VRK3-222ENST00000601324 OR2J3O76001 311 aa2.86□□□□□ -1.95
VRK3-222ENST00000601324 OR7C1O76099 320 aaPredicted RBP2.86□□□□□ -1.95
VRK3-222ENST00000601324 HMGN1P05114 100 aa2.86□□□□□ -1.95
VRK3-222ENST00000601324 CRYGCP07315 174 aa2.86□□□□□ -1.95
VRK3-222ENST00000601324 CTSDP07339 412 aaPredicted RBP2.86□□□□□ -1.95
VRK3-222ENST00000601324 MT1HL1P0DM35 61 aa2.86□□□□□ -1.95
VRK3-222ENST00000601324 APELAP0DMC3 54 aa2.86□□□□□ -1.95
VRK3-222ENST00000601324 ACTR3P61158 418 aa2.86□□□□□ -1.95
VRK3-222ENST00000601324 MAPRE2Q15555 327 aa2.86□□□□□ -1.95
VRK3-222ENST00000601324 PRSS8Q16651 343 aa2.86□□□□□ -1.95
VRK3-222ENST00000601324 C6orf183Q5T699 404 aa2.86□□□□□ -1.95
VRK3-222ENST00000601324 TMEM244Q5VVB8 128 aa2.86□□□□□ -1.95
VRK3-222ENST00000601324 TMEM236Q5W0B7 351 aa2.86□□□□□ -1.95
VRK3-222ENST00000601324 PDPNQ86YL7 162 aa2.86□□□□□ -1.95
VRK3-222ENST00000601324 DRAXINQ8NBI3 349 aaPredicted RBP2.86□□□□□ -1.95
VRK3-222ENST00000601324 OR10G2Q8NGC3 310 aa2.86□□□□□ -1.95
VRK3-222ENST00000601324 OR52N1Q8NH53 320 aa2.86□□□□□ -1.95
VRK3-222ENST00000601324 MRPL30Q8TCC3 161 aaKnown RBP2.86□□□□□ -1.95
VRK3-222ENST00000601324 SRSF12Q8WXF0 261 aaKnown RBP2.86□□□□□ -1.95
VRK3-222ENST00000601324 ABHD14BQ96IU4 210 aa2.86□□□□□ -1.95
VRK3-222ENST00000601324 NICN1Q9BSH3 213 aa2.86□□□□□ -1.95
VRK3-222ENST00000601324 TMBIM4Q9HC24 238 aa2.86□□□□□ -1.95
VRK3-222ENST00000601324 PIPOXQ9P0Z9 390 aa2.86□□□□□ -1.95
VRK3-222ENST00000601324 IGHV1OR15-1A0A075B7D0 117 aa2.85□□□□□ -1.95
VRK3-222ENST00000601324 A0A0G2JND7 137 aa2.85□□□□□ -1.95
VRK3-222ENST00000601324 OR4C46A6NHA9 309 aa2.85□□□□□ -1.95
VRK3-222ENST00000601324 ZNF670-ZNF695F2Z2N8 137 aa2.85□□□□□ -1.95
VRK3-222ENST00000601324 J3QRE1 110 aa2.85□□□□□ -1.95
VRK3-222ENST00000601324 CA11O75493 328 aa2.85□□□□□ -1.95
VRK3-222ENST00000601324 CDRT1O95170 752 aa2.85□□□□□ -1.95
VRK3-222ENST00000601324 OXTP01178 125 aa2.85□□□□□ -1.95
VRK3-222ENST00000601324 MAS1P04201 325 aa2.85□□□□□ -1.95
VRK3-222ENST00000601324 KRT8P05787 483 aa2.85□□□□□ -1.95
VRK3-222ENST00000601324 ELK1P19419 428 aa2.85□□□□□ -1.95
VRK3-222ENST00000601324 MAP2K4P45985 399 aa2.85□□□□□ -1.95
VRK3-222ENST00000601324 PSME3P61289 254 aa2.85□□□□□ -1.95
VRK3-222ENST00000601324 HAMPP81172 84 aa2.85□□□□□ -1.95
VRK3-222ENST00000601324 C10orf55Q5SWW7 151 aa2.85□□□□□ -1.95
VRK3-222ENST00000601324 ZNF880Q6PDB4 577 aa2.85□□□□□ -1.95
VRK3-222ENST00000601324 CLEC19AQ6UXS0 136 aa2.85□□□□□ -1.95
VRK3-222ENST00000601324 UBE2DNLQ8IWF7 75 aa2.85□□□□□ -1.95
VRK3-222ENST00000601324 FAM24BQ8N5W8 94 aa2.85□□□□□ -1.95
VRK3-222ENST00000601324 ZNF502Q8TBZ5 544 aa2.85□□□□□ -1.95
VRK3-222ENST00000601324 TNFAIP8L1Q8WVP5 186 aa2.85□□□□□ -1.95
VRK3-222ENST00000601324 PTX4Q96A99 478 aa2.85□□□□□ -1.95
VRK3-222ENST00000601324 ASB9Q96DX5 294 aa2.85□□□□□ -1.95
VRK3-222ENST00000601324 SIKE1Q9BRV8 207 aa2.85□□□□□ -1.95
VRK3-222ENST00000601324 RNF167Q9H6Y7 350 aa2.85□□□□□ -1.95
VRK3-222ENST00000601324 ISG20L2Q9H9L3 353 aaKnown RBP2.85□□□□□ -1.95
VRK3-222ENST00000601324 NEK6Q9HC98 313 aa2.85□□□□□ -1.95
VRK3-222ENST00000601324 SLC35D1Q9NTN3 355 aa2.85□□□□□ -1.95
VRK3-222ENST00000601324 ENOPH1Q9UHY7 261 aa2.85□□□□□ -1.95
VRK3-222ENST00000601324 TRAPPC2LQ9UL33 140 aa2.85□□□□□ -1.95
VRK3-222ENST00000601324 IGLV11-55A0A075B6I3 123 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms