RNA–Protein interactions for RNA: ENST00000601065.5

SNRNP70-209, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 3

Gene SNRNP70, Length 1,757 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-209ENST00000601065 ZNF355PQ9NSJ1 428 aa17.24■□□□□ 0.35
SNRNP70-209ENST00000601065 SPP1P10451 314 aa17.23■□□□□ 0.35
SNRNP70-209ENST00000601065 ZNF329Q86UD4 541 aa17.23■□□□□ 0.35
SNRNP70-209ENST00000601065 PARD6GQ9BYG4 376 aaPredicted RBP17.23■□□□□ 0.35
SNRNP70-209ENST00000601065 TRBV9A0A0B4J1U6 114 aa17.23■□□□□ 0.35
SNRNP70-209ENST00000601065 IGLV1-40P01703 118 aa17.23■□□□□ 0.35
SNRNP70-209ENST00000601065 HIST1H1BP16401 226 aaKnown RBP17.23■□□□□ 0.35
SNRNP70-209ENST00000601065 FGF7P21781 194 aa17.23■□□□□ 0.35
SNRNP70-209ENST00000601065 GPX4P36969 197 aaPredicted RBP17.23■□□□□ 0.35
SNRNP70-209ENST00000601065 EIF5AL1Q6IS14 154 aaKnown RBP17.23■□□□□ 0.35
SNRNP70-209ENST00000601065 TREML4Q6UXN2 200 aa17.23■□□□□ 0.35
SNRNP70-209ENST00000601065 SLC16A13Q7RTY0 426 aa17.23■□□□□ 0.35
SNRNP70-209ENST00000601065 CACNG8Q8WXS5 425 aa17.23■□□□□ 0.35
SNRNP70-209ENST00000601065 RSG1Q9BU20 258 aa17.23■□□□□ 0.35
SNRNP70-209ENST00000601065 C16orf95Q9H693 158 aa17.23■□□□□ 0.35
SNRNP70-209ENST00000601065 I3L2K1 104 aa17.22■□□□□ 0.35
SNRNP70-209ENST00000601065 BRI3O95415 125 aa17.22■□□□□ 0.35
SNRNP70-209ENST00000601065 IGHV3-48P01763 117 aa17.22■□□□□ 0.35
SNRNP70-209ENST00000601065 AKR1C1Q04828 323 aa17.22■□□□□ 0.35
SNRNP70-209ENST00000601065 GAMTQ14353 236 aa17.22■□□□□ 0.35
SNRNP70-209ENST00000601065 NPVFQ9HCQ7 196 aa17.22■□□□□ 0.35
SNRNP70-209ENST00000601065 THYN1Q9P016 225 aa17.22■□□□□ 0.35
SNRNP70-209ENST00000601065 WDR83OSQ9Y284 106 aa17.22■□□□□ 0.35
SNRNP70-209ENST00000601065 JMJD1CQ15652 2540 aa17.21■□□□□ 0.35
SNRNP70-209ENST00000601065 FNDC10F2Z333 226 aa17.21■□□□□ 0.35
SNRNP70-209ENST00000601065 H3BUA1 57 aa17.21■□□□□ 0.35
SNRNP70-209ENST00000601065 K7EIM0 57 aa17.21■□□□□ 0.35
SNRNP70-209ENST00000601065 OR2J3O76001 311 aa17.21■□□□□ 0.35
SNRNP70-209ENST00000601065 MT-CO2P00403 227 aa17.21■□□□□ 0.35
SNRNP70-209ENST00000601065 IGHG4P01861 327 aa17.21■□□□□ 0.35
SNRNP70-209ENST00000601065 SEC11BP0C7V7 166 aa17.21■□□□□ 0.35
SNRNP70-209ENST00000601065 MDKP21741 143 aaPredicted RBP17.21■□□□□ 0.35
SNRNP70-209ENST00000601065 BTNL8Q6UX41 500 aa17.21■□□□□ 0.35
SNRNP70-209ENST00000601065 GNPNAT1Q96EK6 184 aaPredicted RBP17.21■□□□□ 0.35
SNRNP70-209ENST00000601065 MS4A10Q96PG2 267 aa17.21■□□□□ 0.35
SNRNP70-209ENST00000601065 C2CD3Q4AC94 2353 aa17.21■□□□□ 0.35
SNRNP70-209ENST00000601065 IGHV3-21A0A0B4J1V1 117 aa17.2■□□□□ 0.34
SNRNP70-209ENST00000601065 NDUFA7O95182 113 aa17.2■□□□□ 0.34
SNRNP70-209ENST00000601065 DEFA5Q01523 94 aa17.2■□□□□ 0.34
SNRNP70-209ENST00000601065 C10orf99Q6UWK7 81 aa17.2■□□□□ 0.34
SNRNP70-209ENST00000601065 OR2G3Q8NGZ4 309 aa17.2■□□□□ 0.34
SNRNP70-209ENST00000601065 PCNPQ8WW12 178 aaKnown RBP17.2■□□□□ 0.34
SNRNP70-209ENST00000601065 PSMB11A5LHX3 300 aa17.2■□□□□ 0.34
SNRNP70-209ENST00000601065 SLC35B1P78383 322 aa17.2■□□□□ 0.34
SNRNP70-209ENST00000601065 RHOGP84095 191 aa17.2■□□□□ 0.34
SNRNP70-209ENST00000601065 ETFRF1Q6IPR1 90 aa17.2■□□□□ 0.34
SNRNP70-209ENST00000601065 LINC01006Q8NI28 216 aa17.2■□□□□ 0.34
SNRNP70-209ENST00000601065 ACY3Q96HD9 319 aa17.2■□□□□ 0.34
SNRNP70-209ENST00000601065 SLC35E1Q96K37 410 aa17.2■□□□□ 0.34
SNRNP70-209ENST00000601065 PLA2G2EQ9NZK7 142 aa17.2■□□□□ 0.34
SNRNP70-209ENST00000601065 FBXL7Q9UJT9 491 aa17.2■□□□□ 0.34
SNRNP70-209ENST00000601065 RPS10-NUDT3A0A1W2PQS6 291 aa17.19■□□□□ 0.34
SNRNP70-209ENST00000601065 NDUFB8O95169 186 aa17.19■□□□□ 0.34
SNRNP70-209ENST00000601065 PSMB8P28062 276 aa17.19■□□□□ 0.34
SNRNP70-209ENST00000601065 NECAP1Q8NC96 275 aa17.19■□□□□ 0.34
SNRNP70-209ENST00000601065 NPCDR1Q9BY65 106 aa17.19■□□□□ 0.34
SNRNP70-209ENST00000601065 TEPPQ6URK8 271 aa17.18■□□□□ 0.34
SNRNP70-209ENST00000601065 TMEM144Q7Z5S9 345 aa17.18■□□□□ 0.34
SNRNP70-209ENST00000601065 CENPVQ7Z7K6 275 aaPredicted RBP17.18■□□□□ 0.34
SNRNP70-209ENST00000601065 KLK15Q9H2R5 256 aa17.18■□□□□ 0.34
SNRNP70-209ENST00000601065 MRPL36Q9P0J6 103 aaKnown RBP17.18■□□□□ 0.34
SNRNP70-209ENST00000601065 LSM4Q9Y4Z0 139 aaKnown RBP17.18■□□□□ 0.34
SNRNP70-209ENST00000601065 TRGV3P03979 118 aa17.17■□□□□ 0.34
SNRNP70-209ENST00000601065 PF4V1P10720 104 aa17.17■□□□□ 0.34
SNRNP70-209ENST00000601065 C15orf32Q32M92 178 aa17.17■□□□□ 0.34
SNRNP70-209ENST00000601065 TEX38Q6PEX7 206 aa17.17■□□□□ 0.34
SNRNP70-209ENST00000601065 TMEM182Q6ZP80 229 aaPredicted RBP17.17■□□□□ 0.34
SNRNP70-209ENST00000601065 TMEM89A2RUT3 159 aa17.17■□□□□ 0.34
SNRNP70-209ENST00000601065 MFSD2BA6NFX1 497 aa17.17■□□□□ 0.34
SNRNP70-209ENST00000601065 FAM223BA6NKX1 122 aa17.17■□□□□ 0.34
SNRNP70-209ENST00000601065 MPDU1O75352 247 aa17.17■□□□□ 0.34
SNRNP70-209ENST00000601065 RAB9AP51151 201 aa17.17■□□□□ 0.34
SNRNP70-209ENST00000601065 TPPP2P59282 170 aa17.17■□□□□ 0.34
SNRNP70-209ENST00000601065 FAM223AQ8IWN6 122 aa17.17■□□□□ 0.34
SNRNP70-209ENST00000601065 ZNF709Q8N972 641 aa17.17■□□□□ 0.34
SNRNP70-209ENST00000601065 MGST2Q99735 147 aa17.17■□□□□ 0.34
SNRNP70-209ENST00000601065 PSMG3Q9BT73 122 aaPredicted RBP17.17■□□□□ 0.34
SNRNP70-209ENST00000601065 IGKV1OR2-108A0A075B7D4 117 aa17.16■□□□□ 0.34
SNRNP70-209ENST00000601065 RND2P52198 227 aa17.16■□□□□ 0.34
SNRNP70-209ENST00000601065 RAB14P61106 215 aa17.16■□□□□ 0.34
SNRNP70-209ENST00000601065 LCNL1Q6ZST4 164 aa17.16■□□□□ 0.34
SNRNP70-209ENST00000601065 KLHDC1Q8N7A1 406 aa17.16■□□□□ 0.34
SNRNP70-209ENST00000601065 TMEM116Q8NCL8 245 aa17.16■□□□□ 0.34
SNRNP70-209ENST00000601065 OR4F5Q8NH21 305 aa17.16■□□□□ 0.34
SNRNP70-209ENST00000601065 RNF141Q8WVD5 230 aa17.16■□□□□ 0.34
SNRNP70-209ENST00000601065 NPIPB3Q92617 1050 aa17.16■□□□□ 0.34
SNRNP70-209ENST00000601065 S4R3C0 116 aa17.16■□□□□ 0.34
SNRNP70-209ENST00000601065 SETD2Q9BYW2 2564 aaPredicted RBP17.16■□□□□ 0.34
SNRNP70-209ENST00000601065 SULT1A2P50226 295 aa17.15■□□□□ 0.34
SNRNP70-209ENST00000601065 FOXE3Q13461 319 aa17.15■□□□□ 0.34
SNRNP70-209ENST00000601065 VN1R17PQ8TDU5 208 aa17.15■□□□□ 0.34
SNRNP70-209ENST00000601065 TIMM9Q9Y5J7 89 aa17.15■□□□□ 0.34
SNRNP70-209ENST00000601065 C17orf112F2Z3M2 114 aa17.15■□□□□ 0.34
SNRNP70-209ENST00000601065 AGPAT2O15120 278 aa17.15■□□□□ 0.34
SNRNP70-209ENST00000601065 ELANEP08246 267 aa17.15■□□□□ 0.34
SNRNP70-209ENST00000601065 CAMLGP49069 296 aa17.15■□□□□ 0.34
SNRNP70-209ENST00000601065 WIPF2Q8TF74 440 aaPredicted RBP17.15■□□□□ 0.34
SNRNP70-209ENST00000601065 CXorf58Q96LI9 332 aa17.15■□□□□ 0.34
SNRNP70-209ENST00000601065 RAB31Q13636 194 aa17.14■□□□□ 0.33
SNRNP70-209ENST00000601065 ACSM6Q6P461 480 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms