RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 MED6O75586 246 aa10.47□□□□□ -0.73
VRK3-219ENST00000600137 EDN2P20800 178 aa10.47□□□□□ -0.73
VRK3-219ENST00000600137 MFAP4P55083 255 aa10.47□□□□□ -0.73
VRK3-219ENST00000600137 KRTAP10-11P60412 298 aa10.47□□□□□ -0.73
VRK3-219ENST00000600137 OXA1LQ15070 435 aa10.47□□□□□ -0.73
VRK3-219ENST00000600137 RPEL1Q2QD12 228 aa10.47□□□□□ -0.73
VRK3-219ENST00000600137 PRSS54Q6PEW0 395 aa10.47□□□□□ -0.73
VRK3-219ENST00000600137 RNASEH2CQ8TDP1 164 aaKnown RBP10.47□□□□□ -0.73
VRK3-219ENST00000600137 BSCL2Q96G97 398 aaPredicted RBP10.47□□□□□ -0.73
VRK3-219ENST00000600137 ZNF436Q9C0F3 470 aaPredicted RBP10.47□□□□□ -0.73
VRK3-219ENST00000600137 GSKIPQ9P0R6 139 aa10.47□□□□□ -0.73
VRK3-219ENST00000600137 PMS2P5A8MQ11 134 aa10.46□□□□□ -0.73
VRK3-219ENST00000600137 SEC14L6B5MCN3 397 aa10.46□□□□□ -0.73
VRK3-219ENST00000600137 LGALS9O00182 355 aa10.46□□□□□ -0.73
VRK3-219ENST00000600137 CORTO00230 105 aa10.46□□□□□ -0.73
VRK3-219ENST00000600137 SIX6O95475 246 aa10.46□□□□□ -0.73
VRK3-219ENST00000600137 IFNA10P01566 189 aa10.46□□□□□ -0.73
VRK3-219ENST00000600137 CSN3P07498 182 aa10.46□□□□□ -0.73
VRK3-219ENST00000600137 EGFEM1PQ0D2K5 195 aa10.46□□□□□ -0.73
VRK3-219ENST00000600137 TATDN3Q17R31 274 aa10.46□□□□□ -0.73
VRK3-219ENST00000600137 UNQ9165/PRO28630Q6UXU0 137 aa10.46□□□□□ -0.73
VRK3-219ENST00000600137 REC114Q7Z4M0 266 aa10.46□□□□□ -0.73
VRK3-219ENST00000600137 OR9G4Q8NGQ1 327 aa10.46□□□□□ -0.73
VRK3-219ENST00000600137 OR4X1Q8NH49 305 aa10.46□□□□□ -0.73
VRK3-219ENST00000600137 SMIM8Q96KF7 97 aa10.46□□□□□ -0.73
VRK3-219ENST00000600137 CIB3Q96Q77 187 aaPredicted RBP10.46□□□□□ -0.73
VRK3-219ENST00000600137 MCRIP2Q9BUT9 160 aaKnown RBP10.46□□□□□ -0.73
VRK3-219ENST00000600137 IGHV3-35A0A0C4DH35 117 aa10.45□□□□□ -0.74
VRK3-219ENST00000600137 C5orf51A6NDU8 294 aa10.45□□□□□ -0.74
VRK3-219ENST00000600137 H2BFSP57053 126 aa10.45□□□□□ -0.74
VRK3-219ENST00000600137 CD69Q07108 199 aa10.45□□□□□ -0.74
VRK3-219ENST00000600137 SPSB3Q6PJ21 355 aa10.45□□□□□ -0.74
VRK3-219ENST00000600137 TMEM116Q8NCL8 245 aa10.45□□□□□ -0.74
VRK3-219ENST00000600137 SIGLEC8Q9NYZ4 499 aa10.45□□□□□ -0.74
VRK3-219ENST00000600137 ALG5Q9Y673 324 aa10.45□□□□□ -0.74
VRK3-219ENST00000600137 SORL1Q92673 2214 aa10.45□□□□□ -0.74
VRK3-219ENST00000600137 FAM25EA8MYX2 175 aa10.44□□□□□ -0.74
VRK3-219ENST00000600137 K7EPK0 472 aa10.44□□□□□ -0.74
VRK3-219ENST00000600137 CLN5O75503 358 aa10.44□□□□□ -0.74
VRK3-219ENST00000600137 IGKV1-17P01599 117 aa10.44□□□□□ -0.74
VRK3-219ENST00000600137 OPRK1P41145 380 aa10.44□□□□□ -0.74
VRK3-219ENST00000600137 Q56UQ5 140 aa10.44□□□□□ -0.74
VRK3-219ENST00000600137 C9orf66Q5T8R8 295 aa10.44□□□□□ -0.74
VRK3-219ENST00000600137 TMEM14EPQ6UXP3 125 aa10.44□□□□□ -0.74
VRK3-219ENST00000600137 GSG1LQ6UXU4 331 aa10.44□□□□□ -0.74
VRK3-219ENST00000600137 NOXA1Q86UR1 476 aa10.44□□□□□ -0.74
VRK3-219ENST00000600137 UBAC2Q8NBM4 344 aa10.44□□□□□ -0.74
VRK3-219ENST00000600137 TMEM213A2RRL7 107 aa10.43□□□□□ -0.74
VRK3-219ENST00000600137 A8MWP6 167 aa10.43□□□□□ -0.74
VRK3-219ENST00000600137 H3BP45 60 aa10.43□□□□□ -0.74
VRK3-219ENST00000600137 SSSCA1O60232 199 aa10.43□□□□□ -0.74
VRK3-219ENST00000600137 CCNKO75909 580 aa10.43□□□□□ -0.74
VRK3-219ENST00000600137 LY86O95711 162 aa10.43□□□□□ -0.74
VRK3-219ENST00000600137 IGLC1P0CG04 106 aa10.43□□□□□ -0.74
VRK3-219ENST00000600137 C8orf88P0DMB2 117 aa10.43□□□□□ -0.74
VRK3-219ENST00000600137 SLC25A4P12235 298 aa10.43□□□□□ -0.74
VRK3-219ENST00000600137 GPX4P36969 197 aaPredicted RBP10.43□□□□□ -0.74
VRK3-219ENST00000600137 NPBWR1P48145 328 aa10.43□□□□□ -0.74
VRK3-219ENST00000600137 TAS2R30P59541 319 aa10.43□□□□□ -0.74
VRK3-219ENST00000600137 RAB32Q13637 225 aa10.43□□□□□ -0.74
VRK3-219ENST00000600137 GAMTQ14353 236 aa10.43□□□□□ -0.74
VRK3-219ENST00000600137 RGS21Q2M5E4 152 aa10.43□□□□□ -0.74
VRK3-219ENST00000600137 FAM106AQ4KMX7 169 aa10.43□□□□□ -0.74
VRK3-219ENST00000600137 SPANXN5Q5MJ07 72 aa10.43□□□□□ -0.74
VRK3-219ENST00000600137 HAPLN4Q86UW8 402 aa10.43□□□□□ -0.74
VRK3-219ENST00000600137 TMEM190Q8WZ59 177 aa10.43□□□□□ -0.74
VRK3-219ENST00000600137 RAB40CQ96S21 281 aa10.43□□□□□ -0.74
VRK3-219ENST00000600137 GAR1Q9NY12 217 aaKnown RBP10.43□□□□□ -0.74
VRK3-219ENST00000600137 PSENENQ9NZ42 101 aa10.43□□□□□ -0.74
VRK3-219ENST00000600137 IGKV1D-37A0A075B6S9 117 aa10.42□□□□□ -0.74
VRK3-219ENST00000600137 C2orf70A6NJV1 201 aa10.42□□□□□ -0.74
VRK3-219ENST00000600137 H0YIZ8 118 aa10.42□□□□□ -0.74
VRK3-219ENST00000600137 NDUFA4O00483 81 aa10.42□□□□□ -0.74
VRK3-219ENST00000600137 GOSR2O14653 212 aa10.42□□□□□ -0.74
VRK3-219ENST00000600137 GNG7O60262 68 aa10.42□□□□□ -0.74
VRK3-219ENST00000600137 SCGB1D2O95969 90 aa10.42□□□□□ -0.74
VRK3-219ENST00000600137 IGLV1-51P01701 117 aa10.42□□□□□ -0.74
VRK3-219ENST00000600137 IFNA4P05014 189 aa10.42□□□□□ -0.74
VRK3-219ENST00000600137 INSL3P51460 131 aa10.42□□□□□ -0.74
VRK3-219ENST00000600137 ARL16Q0P5N6 197 aa10.42□□□□□ -0.74
VRK3-219ENST00000600137 TM4SF20Q53R12 229 aa10.42□□□□□ -0.74
VRK3-219ENST00000600137 SLC16A13Q7RTY0 426 aa10.42□□□□□ -0.74
VRK3-219ENST00000600137 CACNG8Q8WXS5 425 aa10.42□□□□□ -0.74
VRK3-219ENST00000600137 NPIPB3Q92617 1050 aa10.42□□□□□ -0.74
VRK3-219ENST00000600137 NMES1Q9C002 83 aa10.42□□□□□ -0.74
VRK3-219ENST00000600137 STRAPQ9Y3F4 350 aaKnown RBP10.42□□□□□ -0.74
VRK3-219ENST00000600137 RPS10-NUDT3A0A1W2PQS6 291 aa10.41□□□□□ -0.74
VRK3-219ENST00000600137 NUPL2O15504 423 aaKnown RBP10.41□□□□□ -0.74
VRK3-219ENST00000600137 TSC22D2O75157 780 aa10.41□□□□□ -0.74
VRK3-219ENST00000600137 SAP30O75446 220 aa10.41□□□□□ -0.74
VRK3-219ENST00000600137 FOLR2P14207 255 aa10.41□□□□□ -0.74
VRK3-219ENST00000600137 CXCL3P19876 107 aa10.41□□□□□ -0.74
VRK3-219ENST00000600137 RND2P52198 227 aa10.41□□□□□ -0.74
VRK3-219ENST00000600137 ELLP55199 621 aaPredicted RBP10.41□□□□□ -0.74
VRK3-219ENST00000600137 RAB11AP62491 216 aa10.41□□□□□ -0.74
VRK3-219ENST00000600137 ETFRF1Q6IPR1 90 aa10.41□□□□□ -0.74
VRK3-219ENST00000600137 TOMM20LQ6UXN7 152 aa10.41□□□□□ -0.74
VRK3-219ENST00000600137 ELOVL1Q9BW60 279 aa10.41□□□□□ -0.74
VRK3-219ENST00000600137 GPR61Q9BZJ8 451 aa10.41□□□□□ -0.74
VRK3-219ENST00000600137 ZFAND3Q9H8U3 227 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms