RNA–Protein interactions for RNA: ENST00000599144.5

IRF3-222, Transcript of interferon regulatory factor 3, human

TSL 1 (best) BASIC

Gene IRF3, Length 1,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-222	ENST00000599144	P2RY1	P47900	373 aa		13.86	□□□□□ -0.19
IRF3-222	ENST00000599144	LSM3	P62310	102 aa	Known RBP	13.86	□□□□□ -0.19
IRF3-222	ENST00000599144	C12orf74	Q32Q52	190 aa		13.86	□□□□□ -0.19
IRF3-222	ENST00000599144	FNDC4	Q9H6D8	234 aa	Predicted RBP	13.86	□□□□□ -0.19
IRF3-222	ENST00000599144	ZNF705E	A8MWA4	302 aa	Predicted RBP	13.85	□□□□□ -0.19
IRF3-222	ENST00000599144	CD5	P06127	495 aa		13.85	□□□□□ -0.19
IRF3-222	ENST00000599144	RNASE2	P10153	161 aa	Known RBP	13.85	□□□□□ -0.19
IRF3-222	ENST00000599144	ETV6	P41212	452 aa		13.85	□□□□□ -0.19
IRF3-222	ENST00000599144	TIGIT	Q495A1	244 aa		13.85	□□□□□ -0.19
IRF3-222	ENST00000599144	SLC35G3	Q8N808	338 aa		13.85	□□□□□ -0.19
IRF3-222	ENST00000599144	TBC1D24	Q9ULP9	559 aa		13.85	□□□□□ -0.19
IRF3-222	ENST00000599144		A0A0B4J293	547 aa		13.84	□□□□□ -0.19
IRF3-222	ENST00000599144	PRSS29P	A6NIE9	313 aa		13.84	□□□□□ -0.19
IRF3-222	ENST00000599144		M0QYG6	137 aa		13.84	□□□□□ -0.19
IRF3-222	ENST00000599144	RTL8C	O15255	209 aa		13.84	□□□□□ -0.19
IRF3-222	ENST00000599144	SNCA	P37840	140 aa		13.84	□□□□□ -0.19
IRF3-222	ENST00000599144	RNASE12	Q5GAN4	147 aa	Known RBP	13.84	□□□□□ -0.19
IRF3-222	ENST00000599144	LINC00336	Q6ZUF6	198 aa		13.84	□□□□□ -0.19
IRF3-222	ENST00000599144	SNX29P2	Q8IUI4	249 aa		13.84	□□□□□ -0.19
IRF3-222	ENST00000599144	CSNK1G2-AS1	Q8NCQ2	148 aa		13.84	□□□□□ -0.19
IRF3-222	ENST00000599144	GPX8	Q8TED1	209 aa		13.84	□□□□□ -0.19
IRF3-222	ENST00000599144	DCANP1	Q8TF63	244 aa		13.84	□□□□□ -0.19
IRF3-222	ENST00000599144	DEFB131B	A0A096LNP1	70 aa		13.83	□□□□□ -0.2
IRF3-222	ENST00000599144	IFNA17	P01571	189 aa		13.83	□□□□□ -0.2
IRF3-222	ENST00000599144	SPP1	P10451	314 aa		13.83	□□□□□ -0.2
IRF3-222	ENST00000599144	PVRIG	Q6DKI7	326 aa		13.83	□□□□□ -0.2
IRF3-222	ENST00000599144	MORN3	Q6PF18	240 aa	Predicted RBP	13.83	□□□□□ -0.2
IRF3-222	ENST00000599144	TMEM230	Q96A57	120 aa		13.83	□□□□□ -0.2
IRF3-222	ENST00000599144	METTL26	Q96S19	204 aa		13.83	□□□□□ -0.2
IRF3-222	ENST00000599144	RNF126	Q9BV68	326 aa		13.83	□□□□□ -0.2
IRF3-222	ENST00000599144	TMEM231	Q9H6L2	316 aa		13.83	□□□□□ -0.2
IRF3-222	ENST00000599144		A0A0G2JRQ6	117 aa		13.82	□□□□□ -0.2
IRF3-222	ENST00000599144	S100G	P29377	79 aa		13.82	□□□□□ -0.2
IRF3-222	ENST00000599144	HOXA1	P49639	335 aa	Predicted RBP	13.82	□□□□□ -0.2
IRF3-222	ENST00000599144	PSMG4	Q5JS54	123 aa		13.82	□□□□□ -0.2
IRF3-222	ENST00000599144	TP53RK	Q96S44	253 aa		13.82	□□□□□ -0.2
IRF3-222	ENST00000599144	FAM212B	Q9NTI7	297 aa	Predicted RBP	13.82	□□□□□ -0.2
IRF3-222	ENST00000599144	PKHD1	P08F94	4074 aa		13.82	□□□□□ -0.2
IRF3-222	ENST00000599144		A0A1W2PS18	150 aa		13.81	□□□□□ -0.2
IRF3-222	ENST00000599144	CLN5	O75503	358 aa		13.81	□□□□□ -0.2
IRF3-222	ENST00000599144		P0C879	139 aa		13.81	□□□□□ -0.2
IRF3-222	ENST00000599144	PGAM2	P15259	253 aa		13.81	□□□□□ -0.2
IRF3-222	ENST00000599144	CRYBB3	P26998	211 aa		13.81	□□□□□ -0.2
IRF3-222	ENST00000599144	OPRK1	P41145	380 aa		13.81	□□□□□ -0.2
IRF3-222	ENST00000599144	DHRS2	Q13268	280 aa		13.81	□□□□□ -0.2
IRF3-222	ENST00000599144	LPCAT3	Q6P1A2	487 aa		13.81	□□□□□ -0.2
IRF3-222	ENST00000599144	CENPS	Q8N2Z9	138 aa		13.81	□□□□□ -0.2
IRF3-222	ENST00000599144	POM121L12	Q8N7R1	296 aa		13.81	□□□□□ -0.2
IRF3-222	ENST00000599144	GRAMD2B	Q96HH9	432 aa		13.81	□□□□□ -0.2
IRF3-222	ENST00000599144	RAB40C	Q96S21	281 aa		13.81	□□□□□ -0.2
IRF3-222	ENST00000599144	IGKV1-17	P01599	117 aa		13.8	□□□□□ -0.2
IRF3-222	ENST00000599144	AMBP	P02760	352 aa		13.8	□□□□□ -0.2
IRF3-222	ENST00000599144	AKR1C2	P52895	323 aa		13.8	□□□□□ -0.2
IRF3-222	ENST00000599144	SP6	Q3SY56	376 aa		13.8	□□□□□ -0.2
IRF3-222	ENST00000599144	GSG1L	Q6UXU4	331 aa		13.8	□□□□□ -0.2
IRF3-222	ENST00000599144	XCL2	Q9UBD3	114 aa		13.8	□□□□□ -0.2
IRF3-222	ENST00000599144	COMMD3	Q9UBI1	195 aa		13.8	□□□□□ -0.2
IRF3-222	ENST00000599144	IGLV2-18	A0A075B6J9	118 aa		13.79	□□□□□ -0.2
IRF3-222	ENST00000599144	MED14OS	P0DP75	135 aa		13.79	□□□□□ -0.2
IRF3-222	ENST00000599144	UCP3	P55916	312 aa		13.79	□□□□□ -0.2
IRF3-222	ENST00000599144	DEFB1	P60022	68 aa		13.79	□□□□□ -0.2
IRF3-222	ENST00000599144	TMEM41B	Q5BJD5	291 aa		13.79	□□□□□ -0.2
IRF3-222	ENST00000599144	MRPS26	Q9BYN8	205 aa	Known RBP	13.79	□□□□□ -0.2
IRF3-222	ENST00000599144	KRTAP4-5	Q9BYR2	181 aa		13.79	□□□□□ -0.2
IRF3-222	ENST00000599144	AGRN	O00468	2067 aa		13.79	□□□□□ -0.2
IRF3-222	ENST00000599144	EMP1	P54849	157 aa		13.78	□□□□□ -0.2
IRF3-222	ENST00000599144	PIGP	P57054	158 aa		13.78	□□□□□ -0.2
IRF3-222	ENST00000599144	CROCCP3	Q8IVE0	287 aa		13.78	□□□□□ -0.2
IRF3-222	ENST00000599144	OR4X1	Q8NH49	305 aa		13.78	□□□□□ -0.2
IRF3-222	ENST00000599144	HELT	A6NFD8	242 aa		13.77	□□□□□ -0.21
IRF3-222	ENST00000599144	INS-IGF2	F8WCM5	200 aa		13.77	□□□□□ -0.21
IRF3-222	ENST00000599144	TMEM127	O75204	238 aa		13.77	□□□□□ -0.21
IRF3-222	ENST00000599144	RCVRN	P35243	200 aa		13.77	□□□□□ -0.21
IRF3-222	ENST00000599144	FXYD7	P58549	80 aa		13.77	□□□□□ -0.21
IRF3-222	ENST00000599144	TRIM16L	Q309B1	348 aa		13.77	□□□□□ -0.21
IRF3-222	ENST00000599144	C16orf54	Q6UWD8	224 aa		13.77	□□□□□ -0.21
IRF3-222	ENST00000599144		Q6ZRM9	215 aa		13.77	□□□□□ -0.21
IRF3-222	ENST00000599144	ZNF575	Q86XF7	245 aa		13.77	□□□□□ -0.21
IRF3-222	ENST00000599144	GLMP	Q8WWB7	406 aa		13.77	□□□□□ -0.21
IRF3-222	ENST00000599144	PDCD10	Q9BUL8	212 aa		13.77	□□□□□ -0.21
IRF3-222	ENST00000599144	PLA2G2E	Q9NZK7	142 aa		13.77	□□□□□ -0.21
IRF3-222	ENST00000599144		U3KQE9	123 aa		13.77	□□□□□ -0.21
IRF3-222	ENST00000599144	SMIM18	P0DKX4	95 aa		13.76	□□□□□ -0.21
IRF3-222	ENST00000599144		P0DMU3	169 aa		13.76	□□□□□ -0.21
IRF3-222	ENST00000599144	FAM231A	P0DMU4	169 aa		13.76	□□□□□ -0.21
IRF3-222	ENST00000599144	FAM231C	P0DMU5	169 aa		13.76	□□□□□ -0.21
IRF3-222	ENST00000599144	SUB1	P53999	127 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
IRF3-222	ENST00000599144	YIPF6	Q96EC8	236 aa		13.76	□□□□□ -0.21
IRF3-222	ENST00000599144	NARS2	Q96I59	477 aa	Known RBP	13.76	□□□□□ -0.21
IRF3-222	ENST00000599144	NDUFAF3	Q9BU61	184 aa		13.76	□□□□□ -0.21
IRF3-222	ENST00000599144	ENY2	Q9NPA8	101 aa		13.76	□□□□□ -0.21
IRF3-222	ENST00000599144	PKD1	P98161	4303 aa		13.76	□□□□□ -0.21
IRF3-222	ENST00000599144	C3orf85	A0A1B0GTC6	90 aa		13.75	□□□□□ -0.21
IRF3-222	ENST00000599144	CORT	O00230	105 aa		13.75	□□□□□ -0.21
IRF3-222	ENST00000599144	IGKV3-20	P01619	116 aa		13.75	□□□□□ -0.21
IRF3-222	ENST00000599144	ELK1	P19419	428 aa		13.75	□□□□□ -0.21
IRF3-222	ENST00000599144	RND2	P52198	227 aa		13.75	□□□□□ -0.21
IRF3-222	ENST00000599144	RND3	P61587	244 aa		13.75	□□□□□ -0.21
IRF3-222	ENST00000599144	USF2	Q15853	346 aa	Predicted RBP	13.75	□□□□□ -0.21
IRF3-222	ENST00000599144	SCPEP1	Q9HB40	452 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms