RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 DUSP18Q8NEJ0 188 aa13.3□□□□□ -0.28
USHBP1-209ENST00000598570 MITD1Q8WV92 249 aa13.3□□□□□ -0.28
USHBP1-209ENST00000598570 RBKSQ9H477 322 aa13.3□□□□□ -0.28
USHBP1-209ENST00000598570 HEYLQ9NQ87 328 aaPredicted RBP13.3□□□□□ -0.28
USHBP1-209ENST00000598570 MRPL36Q9P0J6 103 aaKnown RBP13.3□□□□□ -0.28
USHBP1-209ENST00000598570 TRAV25A0A0B4J276 109 aa13.29□□□□□ -0.28
USHBP1-209ENST00000598570 NPBWR1P48145 328 aa13.29□□□□□ -0.28
USHBP1-209ENST00000598570 ID3Q02535 119 aa13.29□□□□□ -0.28
USHBP1-209ENST00000598570 RELQ04864 619 aaPredicted RBP13.29□□□□□ -0.28
USHBP1-209ENST00000598570 MLANAQ16655 118 aa13.29□□□□□ -0.28
USHBP1-209ENST00000598570 DEFB121Q5J5C9 76 aa13.29□□□□□ -0.28
USHBP1-209ENST00000598570 NOXA1Q86UR1 476 aa13.29□□□□□ -0.28
USHBP1-209ENST00000598570 UXS1Q8NBZ7 420 aa13.29□□□□□ -0.28
USHBP1-209ENST00000598570 SLC24A4Q8NFF2 622 aa13.29□□□□□ -0.28
USHBP1-209ENST00000598570 WDR12Q9GZL7 423 aaKnown RBP13.29□□□□□ -0.28
USHBP1-209ENST00000598570 HIPK2Q9H2X6 1198 aa13.29□□□□□ -0.28
USHBP1-209ENST00000598570 DAZ1Q9NQZ3 744 aaKnown RBP13.29□□□□□ -0.28
USHBP1-209ENST00000598570 C19orf73Q9NVV2 129 aa13.29□□□□□ -0.28
USHBP1-209ENST00000598570 MLXQ9UH92 298 aa13.29□□□□□ -0.28
USHBP1-209ENST00000598570 SMAD5-AS1Q9Y6J3 95 aa13.29□□□□□ -0.28
USHBP1-209ENST00000598570 LINC00854A0A1B0GVQ3 168 aa13.28□□□□□ -0.28
USHBP1-209ENST00000598570 ZNF320A2RRD8 509 aa13.28□□□□□ -0.28
USHBP1-209ENST00000598570 NUPL2O15504 423 aaKnown RBP13.28□□□□□ -0.28
USHBP1-209ENST00000598570 CLN5O75503 358 aa13.28□□□□□ -0.28
USHBP1-209ENST00000598570 ANXA7P20073 488 aaKnown RBP13.28□□□□□ -0.28
USHBP1-209ENST00000598570 IFITM3Q01628 133 aa13.28□□□□□ -0.28
USHBP1-209ENST00000598570 ZNF846Q147U1 533 aa13.28□□□□□ -0.28
USHBP1-209ENST00000598570 Q56UQ5 140 aa13.28□□□□□ -0.28
USHBP1-209ENST00000598570 GGNBP1Q5YKI7 109 aa13.28□□□□□ -0.28
USHBP1-209ENST00000598570 STAB2Q8WWQ8 2551 aa13.27□□□□□ -0.28
USHBP1-209ENST00000598570 CEBPZOSA8MTT3 80 aa13.27□□□□□ -0.29
USHBP1-209ENST00000598570 UPK1BO75841 260 aa13.27□□□□□ -0.29
USHBP1-209ENST00000598570 LY86O95711 162 aa13.27□□□□□ -0.29
USHBP1-209ENST00000598570 IGKV1-17P01599 117 aa13.27□□□□□ -0.29
USHBP1-209ENST00000598570 IGHV3-48P01763 117 aa13.27□□□□□ -0.29
USHBP1-209ENST00000598570 SLC25A4P12235 298 aa13.27□□□□□ -0.29
USHBP1-209ENST00000598570 C11orf87Q6NUJ2 197 aa13.27□□□□□ -0.29
USHBP1-209ENST00000598570 PRSS54Q6PEW0 395 aa13.27□□□□□ -0.29
USHBP1-209ENST00000598570 DTD1Q8TEA8 209 aa13.27□□□□□ -0.29
USHBP1-209ENST00000598570 C20orf85Q9H1P6 137 aa13.27□□□□□ -0.29
USHBP1-209ENST00000598570 IGHV3-35A0A0C4DH35 117 aa13.26□□□□□ -0.29
USHBP1-209ENST00000598570 GNG7O60262 68 aa13.26□□□□□ -0.29
USHBP1-209ENST00000598570 NHLRC4P0CG21 123 aaPredicted RBP13.26□□□□□ -0.29
USHBP1-209ENST00000598570 NPY1RP25929 384 aa13.26□□□□□ -0.29
USHBP1-209ENST00000598570 LINC00322Q6ZN03 302 aaPredicted RBP13.26□□□□□ -0.29
USHBP1-209ENST00000598570 OR1S1Q8NH92 325 aa13.26□□□□□ -0.29
USHBP1-209ENST00000598570 COQ8AQ8NI60 647 aa13.26□□□□□ -0.29
USHBP1-209ENST00000598570 CACNG8Q8WXS5 425 aa13.26□□□□□ -0.29
USHBP1-209ENST00000598570 PINX1Q96BK5 328 aaKnown RBP13.26□□□□□ -0.29
USHBP1-209ENST00000598570 ZFAND3Q9H8U3 227 aa13.26□□□□□ -0.29
USHBP1-209ENST00000598570 TRAV30A0A087WSZ9 112 aa13.25□□□□□ -0.29
USHBP1-209ENST00000598570 RPS10-NUDT3A0A1W2PQS6 291 aa13.25□□□□□ -0.29
USHBP1-209ENST00000598570 GPX4P36969 197 aaPredicted RBP13.25□□□□□ -0.29
USHBP1-209ENST00000598570 TOMM20LQ6UXN7 152 aa13.25□□□□□ -0.29
USHBP1-209ENST00000598570 TMEM61Q8N0U2 210 aa13.25□□□□□ -0.29
USHBP1-209ENST00000598570 OR4D5Q8NGN0 318 aa13.25□□□□□ -0.29
USHBP1-209ENST00000598570 SMPXQ9UHP9 88 aa13.25□□□□□ -0.29
USHBP1-209ENST00000598570 MPTX1A8MV57 137 aa13.24□□□□□ -0.29
USHBP1-209ENST00000598570 MED6O75586 246 aa13.24□□□□□ -0.29
USHBP1-209ENST00000598570 ADAP1O75689 374 aa13.24□□□□□ -0.29
USHBP1-209ENST00000598570 NXPH3O95157 252 aa13.24□□□□□ -0.29
USHBP1-209ENST00000598570 HOXB5P09067 269 aa13.24□□□□□ -0.29
USHBP1-209ENST00000598570 IGLC1P0CG04 106 aa13.24□□□□□ -0.29
USHBP1-209ENST00000598570 YPEL3P61236 119 aaPredicted RBP13.24□□□□□ -0.29
USHBP1-209ENST00000598570 CD69Q07108 199 aa13.24□□□□□ -0.29
USHBP1-209ENST00000598570 ETFRF1Q6IPR1 90 aa13.24□□□□□ -0.29
USHBP1-209ENST00000598570 ZNF600Q6ZNG1 722 aa13.24□□□□□ -0.29
USHBP1-209ENST00000598570 UBAC2Q8NBM4 344 aa13.24□□□□□ -0.29
USHBP1-209ENST00000598570 TENM3Q9P273 2699 aa13.23□□□□□ -0.29
USHBP1-209ENST00000598570 PRSS46E5RG02 174 aa13.23□□□□□ -0.29
USHBP1-209ENST00000598570 TSPAN4O14817 238 aa13.23□□□□□ -0.29
USHBP1-209ENST00000598570 SYNGR2O43760 224 aa13.23□□□□□ -0.29
USHBP1-209ENST00000598570 SCAF4O95104 1147 aaKnown RBP13.23□□□□□ -0.29
USHBP1-209ENST00000598570 OPRK1P41145 380 aa13.23□□□□□ -0.29
USHBP1-209ENST00000598570 C4orf46Q504U0 113 aa13.23□□□□□ -0.29
USHBP1-209ENST00000598570 FAM90A2PQ658T7 463 aa13.23□□□□□ -0.29
USHBP1-209ENST00000598570 MZT2BQ6NZ67 158 aa13.23□□□□□ -0.29
USHBP1-209ENST00000598570 DYNLRB2Q8TF09 96 aa13.23□□□□□ -0.29
USHBP1-209ENST00000598570 CIB3Q96Q77 187 aaPredicted RBP13.23□□□□□ -0.29
USHBP1-209ENST00000598570 VSIRQ9H7M9 311 aa13.23□□□□□ -0.29
USHBP1-209ENST00000598570 NUDT15Q9NV35 164 aa13.23□□□□□ -0.29
USHBP1-209ENST00000598570 IGHV7-4-1A0A0J9YVY3 117 aa13.22□□□□□ -0.29
USHBP1-209ENST00000598570 CHEK1O14757 476 aa13.22□□□□□ -0.29
USHBP1-209ENST00000598570 IL5P05113 134 aa13.22□□□□□ -0.29
USHBP1-209ENST00000598570 IGHV4-30-4P0DP06 118 aa13.22□□□□□ -0.29
USHBP1-209ENST00000598570 ZNF431Q8TF32 576 aaPredicted RBP13.22□□□□□ -0.29
USHBP1-209ENST00000598570 WDR89Q96FK6 387 aaPredicted RBP13.22□□□□□ -0.29
USHBP1-209ENST00000598570 U3KQE9 123 aa13.22□□□□□ -0.29
USHBP1-209ENST00000598570 NBEAL2Q6ZNJ1 2754 aa13.22□□□□□ -0.29
USHBP1-209ENST00000598570 TRAV14DV4A0A0A6YYC5 116 aa13.21□□□□□ -0.29
USHBP1-209ENST00000598570 IFNA10P01566 189 aa13.21□□□□□ -0.29
USHBP1-209ENST00000598570 IFNA21P01568 189 aa13.21□□□□□ -0.29
USHBP1-209ENST00000598570 H2AFB2P0C5Z0 115 aa13.21□□□□□ -0.29
USHBP1-209ENST00000598570 FRMD6-AS1P0C7T7 363 aa13.21□□□□□ -0.29
USHBP1-209ENST00000598570 BTNL8Q6UX41 500 aa13.21□□□□□ -0.29
USHBP1-209ENST00000598570 OR52B4Q8NGK2 314 aa13.21□□□□□ -0.29
USHBP1-209ENST00000598570 OR1S2Q8NGQ3 325 aa13.21□□□□□ -0.29
USHBP1-209ENST00000598570 FAM110AQ9BQ89 295 aa13.21□□□□□ -0.29
USHBP1-209ENST00000598570 FAM240BA0A1B0GVZ2 78 aa13.2□□□□□ -0.3
USHBP1-209ENST00000598570 CRYBB3P26998 211 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms