RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 REC114Q7Z4M0 266 aa15.53■□□□□ 0.08
PNKP-211ENST00000598020 C2orf50Q96LR7 162 aa15.53■□□□□ 0.08
PNKP-211ENST00000598020 ELOVL1Q9BW60 279 aa15.53■□□□□ 0.08
PNKP-211ENST00000598020 GSKIPQ9P0R6 139 aa15.53■□□□□ 0.08
PNKP-211ENST00000598020 C5orf51A6NDU8 294 aa15.52■□□□□ 0.08
PNKP-211ENST00000598020 C15orf62A8K5M9 175 aa15.52■□□□□ 0.08
PNKP-211ENST00000598020 IAPPP10997 89 aa15.52■□□□□ 0.08
PNKP-211ENST00000598020 ADMP35318 185 aa15.52■□□□□ 0.08
PNKP-211ENST00000598020 POLR2GP62487 172 aaKnown RBP eCLIP15.52■□□□□ 0.08
PNKP-211ENST00000598020 IL15RAQ13261 267 aa15.52■□□□□ 0.08
PNKP-211ENST00000598020 FAM106AQ4KMX7 169 aa15.52■□□□□ 0.08
PNKP-211ENST00000598020 ETFRF1Q6IPR1 90 aa15.52■□□□□ 0.08
PNKP-211ENST00000598020 GSG1LQ6UXU4 331 aa15.52■□□□□ 0.08
PNKP-211ENST00000598020 IL34Q6ZMJ4 242 aa15.52■□□□□ 0.08
PNKP-211ENST00000598020 OR4X1Q8NH49 305 aa15.52■□□□□ 0.08
PNKP-211ENST00000598020 CHRDL1Q9BU40 450 aa15.52■□□□□ 0.08
PNKP-211ENST00000598020 ZNF436Q9C0F3 470 aaPredicted RBP15.52■□□□□ 0.08
PNKP-211ENST00000598020 FAM25EA8MYX2 175 aa15.51■□□□□ 0.07
PNKP-211ENST00000598020 WRBO00258 174 aa15.51■□□□□ 0.07
PNKP-211ENST00000598020 IGHV3-48P01763 117 aa15.51■□□□□ 0.07
PNKP-211ENST00000598020 MBPP02686 304 aaPredicted RBP15.51■□□□□ 0.07
PNKP-211ENST00000598020 SLC25A4P12235 298 aa15.51■□□□□ 0.07
PNKP-211ENST00000598020 EGFEM1PQ0D2K5 195 aa15.51■□□□□ 0.07
PNKP-211ENST00000598020 MLANAQ16655 118 aa15.51■□□□□ 0.07
PNKP-211ENST00000598020 RGS21Q2M5E4 152 aa15.51■□□□□ 0.07
PNKP-211ENST00000598020 UBAC2Q8NBM4 344 aa15.51■□□□□ 0.07
PNKP-211ENST00000598020 SMIM8Q96KF7 97 aa15.51■□□□□ 0.07
PNKP-211ENST00000598020 RAB40CQ96S21 281 aa15.51■□□□□ 0.07
PNKP-211ENST00000598020 SIGLEC8Q9NYZ4 499 aa15.51■□□□□ 0.07
PNKP-211ENST00000598020 PEMTQ9UBM1 199 aa15.51■□□□□ 0.07
PNKP-211ENST00000598020 NUPL2O15504 423 aaKnown RBP15.5■□□□□ 0.07
PNKP-211ENST00000598020 GNG7O60262 68 aa15.5■□□□□ 0.07
PNKP-211ENST00000598020 CLN5O75503 358 aa15.5■□□□□ 0.07
PNKP-211ENST00000598020 TMEM50AO95807 157 aa15.5■□□□□ 0.07
PNKP-211ENST00000598020 GPX4P36969 197 aaPredicted RBP15.5■□□□□ 0.07
PNKP-211ENST00000598020 TAS2R30P59541 319 aa15.5■□□□□ 0.07
PNKP-211ENST00000598020 RAB11AP62491 216 aa15.5■□□□□ 0.07
PNKP-211ENST00000598020 CD69Q07108 199 aa15.5■□□□□ 0.07
PNKP-211ENST00000598020 TMEM116Q8NCL8 245 aa15.5■□□□□ 0.07
PNKP-211ENST00000598020 ZC4H2Q9NQZ6 224 aa15.5■□□□□ 0.07
PNKP-211ENST00000598020 MRPL36Q9P0J6 103 aaKnown RBP15.5■□□□□ 0.07
PNKP-211ENST00000598020 RCL1Q9Y2P8 373 aaKnown RBP15.5■□□□□ 0.07
PNKP-211ENST00000598020 A8MWP6 167 aa15.49■□□□□ 0.07
PNKP-211ENST00000598020 NDUFA4O00483 81 aa15.49■□□□□ 0.07
PNKP-211ENST00000598020 IFNA4P05014 189 aa15.49■□□□□ 0.07
PNKP-211ENST00000598020 PAX9P55771 341 aa15.49■□□□□ 0.07
PNKP-211ENST00000598020 PRSS54Q6PEW0 395 aa15.49■□□□□ 0.07
PNKP-211ENST00000598020 CACNG8Q8WXS5 425 aa15.49■□□□□ 0.07
PNKP-211ENST00000598020 OR4C12Q96R67 309 aa15.49■□□□□ 0.07
PNKP-211ENST00000598020 ZMAT5Q9UDW3 170 aaKnown RBP15.49■□□□□ 0.07
PNKP-211ENST00000598020 SSSCA1O60232 199 aa15.48■□□□□ 0.07
PNKP-211ENST00000598020 SAP30O75446 220 aa15.48■□□□□ 0.07
PNKP-211ENST00000598020 SCGB1D2O95969 90 aa15.48■□□□□ 0.07
PNKP-211ENST00000598020 CSN3P07498 182 aa15.48■□□□□ 0.07
PNKP-211ENST00000598020 ELLP55199 621 aaPredicted RBP15.48■□□□□ 0.07
PNKP-211ENST00000598020 RELQ04864 619 aaPredicted RBP15.48■□□□□ 0.07
PNKP-211ENST00000598020 OXA1LQ15070 435 aa15.48■□□□□ 0.07
PNKP-211ENST00000598020 SPANXN5Q5MJ07 72 aa15.48■□□□□ 0.07
PNKP-211ENST00000598020 ZNF414Q96IQ9 312 aa15.48■□□□□ 0.07
PNKP-211ENST00000598020 PSENENQ9NZ42 101 aa15.48■□□□□ 0.07
PNKP-211ENST00000598020 STRAPQ9Y3F4 350 aaKnown RBP15.48■□□□□ 0.07
PNKP-211ENST00000598020 TRAV30A0A087WSZ9 112 aa15.47■□□□□ 0.07
PNKP-211ENST00000598020 PRSS46E5RG02 174 aa15.47■□□□□ 0.07
PNKP-211ENST00000598020 GOSR2O14653 212 aa15.47■□□□□ 0.07
PNKP-211ENST00000598020 SSNA1O43805 119 aa15.47■□□□□ 0.07
PNKP-211ENST00000598020 TSC22D2O75157 780 aa15.47■□□□□ 0.07
PNKP-211ENST00000598020 SLC16A13Q7RTY0 426 aa15.47■□□□□ 0.07
PNKP-211ENST00000598020 TMEM190Q8WZ59 177 aa15.47■□□□□ 0.07
PNKP-211ENST00000598020 ALG5Q9Y673 324 aa15.47■□□□□ 0.07
PNKP-211ENST00000598020 SORL1Q92673 2214 aa15.47■□□□□ 0.07
PNKP-211ENST00000598020 ZNF320A2RRD8 509 aa15.46■□□□□ 0.07
PNKP-211ENST00000598020 K7EPK0 472 aa15.46■□□□□ 0.07
PNKP-211ENST00000598020 SCGB2A1O75556 95 aa15.46■□□□□ 0.07
PNKP-211ENST00000598020 RND2P52198 227 aa15.46■□□□□ 0.07
PNKP-211ENST00000598020 CYCSP99999 105 aaKnown RBP15.46■□□□□ 0.07
PNKP-211ENST00000598020 TMEM14EPQ6UXP3 125 aa15.46■□□□□ 0.07
PNKP-211ENST00000598020 UNQ9165/PRO28630Q6UXU0 137 aa15.46■□□□□ 0.07
PNKP-211ENST00000598020 NMES1Q9C002 83 aa15.46■□□□□ 0.07
PNKP-211ENST00000598020 UFC1Q9Y3C8 167 aa15.46■□□□□ 0.07
PNKP-211ENST00000598020 IGHV3-35A0A0C4DH35 117 aa15.45■□□□□ 0.06
PNKP-211ENST00000598020 TMEM213A2RRL7 107 aa15.45■□□□□ 0.06
PNKP-211ENST00000598020 C2orf70A6NJV1 201 aa15.45■□□□□ 0.06
PNKP-211ENST00000598020 K7EMT4 169 aa15.45■□□□□ 0.06
PNKP-211ENST00000598020 IGLV1-51P01701 117 aa15.45■□□□□ 0.06
PNKP-211ENST00000598020 ADAMTSL5Q6ZMM2 481 aa15.45■□□□□ 0.06
PNKP-211ENST00000598020 C11orf1Q9H5F2 150 aa15.45■□□□□ 0.06
PNKP-211ENST00000598020 PMS2P5A8MQ11 134 aa15.44■□□□□ 0.06
PNKP-211ENST00000598020 H3BP45 60 aa15.44■□□□□ 0.06
PNKP-211ENST00000598020 SIX6O95475 246 aa15.44■□□□□ 0.06
PNKP-211ENST00000598020 IGKV1-17P01599 117 aa15.44■□□□□ 0.06
PNKP-211ENST00000598020 IGLC1P0CG04 106 aa15.44■□□□□ 0.06
PNKP-211ENST00000598020 C8orf88P0DMB2 117 aa15.44■□□□□ 0.06
PNKP-211ENST00000598020 KRTAP10-11P60412 298 aa15.44■□□□□ 0.06
PNKP-211ENST00000598020 GAMTQ14353 236 aa15.44■□□□□ 0.06
PNKP-211ENST00000598020 ZNF600Q6ZNG1 722 aa15.44■□□□□ 0.06
PNKP-211ENST00000598020 OR1S2Q8NGQ3 325 aa15.44■□□□□ 0.06
PNKP-211ENST00000598020 NPIPB3Q92617 1050 aa15.44■□□□□ 0.06
PNKP-211ENST00000598020 MARC2Q969Z3 335 aa15.44■□□□□ 0.06
PNKP-211ENST00000598020 PAIP2BQ9ULR5 123 aaKnown RBP15.44■□□□□ 0.06
PNKP-211ENST00000598020 LSM5Q9Y4Y9 91 aaKnown RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms