RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 TEX50A0A1B0GTY4 177 aa10.16□□□□□ -0.78
USHBP1-207ENST00000597928 WNT2P09544 360 aa10.16□□□□□ -0.78
USHBP1-207ENST00000597928 SRP14P37108 136 aaKnown RBP10.16□□□□□ -0.78
USHBP1-207ENST00000597928 TIMM23BQ5SRD1 257 aa10.16□□□□□ -0.78
USHBP1-207ENST00000597928 REC114Q7Z4M0 266 aa10.16□□□□□ -0.78
USHBP1-207ENST00000597928 PLSCR4Q9NRQ2 329 aa10.16□□□□□ -0.78
USHBP1-207ENST00000597928 DKK4Q9UBT3 224 aa10.16□□□□□ -0.78
USHBP1-207ENST00000597928 AMMECR1Q9Y4X0 333 aaPredicted RBP10.16□□□□□ -0.78
USHBP1-207ENST00000597928 YPEL1O60688 119 aa10.15□□□□□ -0.78
USHBP1-207ENST00000597928 LMO1P25800 156 aa10.15□□□□□ -0.78
USHBP1-207ENST00000597928 CDKN1AP38936 164 aa10.15□□□□□ -0.78
USHBP1-207ENST00000597928 JOSD1Q15040 202 aaPredicted RBP10.15□□□□□ -0.78
USHBP1-207ENST00000597928 KLF17Q5JT82 389 aaPredicted RBP10.15□□□□□ -0.78
USHBP1-207ENST00000597928 MORN5Q5VZ52 161 aa10.15□□□□□ -0.78
USHBP1-207ENST00000597928 TCF24Q7RTU0 167 aa10.15□□□□□ -0.78
USHBP1-207ENST00000597928 RPEQ96AT9 228 aa10.15□□□□□ -0.78
USHBP1-207ENST00000597928 PGLYRP4Q96LB8 373 aa10.15□□□□□ -0.78
USHBP1-207ENST00000597928 YPEL2Q96QA6 119 aa10.15□□□□□ -0.78
USHBP1-207ENST00000597928 FBXL15Q9H469 300 aa10.15□□□□□ -0.78
USHBP1-207ENST00000597928 ZFYVE26Q68DK2 2539 aa10.15□□□□□ -0.78
USHBP1-207ENST00000597928 USP9YO00507 2555 aaPredicted RBP10.15□□□□□ -0.78
USHBP1-207ENST00000597928 TRAV8-1A0A0A6YYK1 113 aa10.15□□□□□ -0.78
USHBP1-207ENST00000597928 STAG3L2P0CL84 134 aa10.15□□□□□ -0.78
USHBP1-207ENST00000597928 STAG3L3P0CL85 134 aa10.15□□□□□ -0.78
USHBP1-207ENST00000597928 SUB1P53999 127 aaKnown RBP eCLIP10.15□□□□□ -0.78
USHBP1-207ENST00000597928 PRNTQ86SH4 94 aa10.15□□□□□ -0.78
USHBP1-207ENST00000597928 NEU1Q99519 415 aa10.15□□□□□ -0.78
USHBP1-207ENST00000597928 CNTFRP26992 372 aa10.15□□□□□ -0.79
USHBP1-207ENST00000597928 DMRTA1Q5VZB9 504 aa10.15□□□□□ -0.79
USHBP1-207ENST00000597928 LINC00305Q7Z4B0 112 aa10.15□□□□□ -0.79
USHBP1-207ENST00000597928 DNAJC4Q9NNZ3 241 aa10.15□□□□□ -0.79
USHBP1-207ENST00000597928 RELNP78509 3460 aa10.15□□□□□ -0.79
USHBP1-207ENST00000597928 LRBAP50851 2863 aa10.14□□□□□ -0.79
USHBP1-207ENST00000597928 J3KRW8 73 aa10.14□□□□□ -0.79
USHBP1-207ENST00000597928 CRYABP02511 175 aaKnown RBP10.14□□□□□ -0.79
USHBP1-207ENST00000597928 CT45A6P0DMU7 189 aa10.14□□□□□ -0.79
USHBP1-207ENST00000597928 CT45A5P0DMU8 189 aa10.14□□□□□ -0.79
USHBP1-207ENST00000597928 CT45A7P0DMV0 189 aa10.14□□□□□ -0.79
USHBP1-207ENST00000597928 VMA21Q3ZAQ7 101 aa10.14□□□□□ -0.79
USHBP1-207ENST00000597928 Q6ZN92 141 aa10.14□□□□□ -0.79
USHBP1-207ENST00000597928 PDPNQ86YL7 162 aa10.14□□□□□ -0.79
USHBP1-207ENST00000597928 SNAI2O43623 268 aa10.14□□□□□ -0.79
USHBP1-207ENST00000597928 C17orf58Q2M2W7 97 aa10.14□□□□□ -0.79
USHBP1-207ENST00000597928 SEM1Q6ZVN7 128 aa10.14□□□□□ -0.79
USHBP1-207ENST00000597928 LURAP1LQ8IV03 231 aa10.14□□□□□ -0.79
USHBP1-207ENST00000597928 ZCCHC14Q8WYQ9 949 aaKnown RBP10.14□□□□□ -0.79
USHBP1-207ENST00000597928 TMEM167BQ9NRX6 74 aa10.14□□□□□ -0.79
USHBP1-207ENST00000597928 TNFRSF19Q9NS68 423 aa10.14□□□□□ -0.79
USHBP1-207ENST00000597928 ELOVL5Q9NYP7 299 aa10.14□□□□□ -0.79
USHBP1-207ENST00000597928 PMS2P5A8MQ11 134 aa10.14□□□□□ -0.79
USHBP1-207ENST00000597928 NPIPB11E5RHQ5 1161 aa10.14□□□□□ -0.79
USHBP1-207ENST00000597928 CHEK1O14757 476 aa10.14□□□□□ -0.79
USHBP1-207ENST00000597928 C8orf88P0DMB2 117 aa10.14□□□□□ -0.79
USHBP1-207ENST00000597928 GNB4Q9HAV0 340 aa10.14□□□□□ -0.79
USHBP1-207ENST00000597928 TBL2Q9Y4P3 447 aaKnown RBP10.14□□□□□ -0.79
USHBP1-207ENST00000597928 A0A1W2PN81 502 aa10.13□□□□□ -0.79
USHBP1-207ENST00000597928 E7EUB6 86 aa10.13□□□□□ -0.79
USHBP1-207ENST00000597928 M0R2Z0 102 aa10.13□□□□□ -0.79
USHBP1-207ENST00000597928 MPDU1O75352 247 aa10.13□□□□□ -0.79
USHBP1-207ENST00000597928 APCSP02743 223 aa10.13□□□□□ -0.79
USHBP1-207ENST00000597928 MMDQ15546 238 aa10.13□□□□□ -0.79
USHBP1-207ENST00000597928 SLC25A33Q9BSK2 321 aa10.13□□□□□ -0.79
USHBP1-207ENST00000597928 FAM215AQ9Y5M1 114 aa10.13□□□□□ -0.79
USHBP1-207ENST00000597928 DSCAMO60469 2012 aa10.13□□□□□ -0.79
USHBP1-207ENST00000597928 IGKV3-7A0A075B6H7 116 aa10.13□□□□□ -0.79
USHBP1-207ENST00000597928 LOC102724200A0A096LPH7 203 aaPredicted RBP10.13□□□□□ -0.79
USHBP1-207ENST00000597928 IGHV3-49A0A0A0MS15 119 aa10.13□□□□□ -0.79
USHBP1-207ENST00000597928 M0R143 59 aa10.13□□□□□ -0.79
USHBP1-207ENST00000597928 HINT1P49773 126 aaPredicted RBP10.13□□□□□ -0.79
USHBP1-207ENST00000597928 LOXL3P58215 753 aa10.13□□□□□ -0.79
USHBP1-207ENST00000597928 LOC389332A0A1B0GUA5 103 aa10.13□□□□□ -0.79
USHBP1-207ENST00000597928 CGB1A6NKQ9 187 aa10.13□□□□□ -0.79
USHBP1-207ENST00000597928 K7EN84 100 aa10.13□□□□□ -0.79
USHBP1-207ENST00000597928 CORTO00230 105 aa10.13□□□□□ -0.79
USHBP1-207ENST00000597928 ZNF138P52744 262 aa10.13□□□□□ -0.79
USHBP1-207ENST00000597928 BPIFB3P59826 476 aa10.13□□□□□ -0.79
USHBP1-207ENST00000597928 FAM168AQ92567 244 aa10.13□□□□□ -0.79
USHBP1-207ENST00000597928 GAFA1Q96PS6 74 aa10.13□□□□□ -0.79
USHBP1-207ENST00000597928 UPK2O00526 184 aa10.12□□□□□ -0.79
USHBP1-207ENST00000597928 KIR2DS2P43631 304 aa10.12□□□□□ -0.79
USHBP1-207ENST00000597928 VDAC2P45880 294 aaPredicted RBP10.12□□□□□ -0.79
USHBP1-207ENST00000597928 TMEM200BQ69YZ2 307 aa10.12□□□□□ -0.79
USHBP1-207ENST00000597928 OR5R1Q8NH85 324 aa10.12□□□□□ -0.79
USHBP1-207ENST00000597928 ADTRPQ96IZ2 230 aa10.12□□□□□ -0.79
USHBP1-207ENST00000597928 ZNF430Q9H8G1 570 aaPredicted RBP10.12□□□□□ -0.79
USHBP1-207ENST00000597928 IL36BQ9NZH7 164 aa10.12□□□□□ -0.79
USHBP1-207ENST00000597928 DPRXA6NFQ7 191 aa10.12□□□□□ -0.79
USHBP1-207ENST00000597928 SH2D7A6NKC9 451 aaPredicted RBP10.12□□□□□ -0.79
USHBP1-207ENST00000597928 AREGP15514 252 aa10.12□□□□□ -0.79
USHBP1-207ENST00000597928 PLA2G2CQ5R387 149 aa10.12□□□□□ -0.79
USHBP1-207ENST00000597928 MUC15Q8N387 334 aa10.12□□□□□ -0.79
USHBP1-207ENST00000597928 POLQO75417 2590 aa10.12□□□□□ -0.79
USHBP1-207ENST00000597928 VENTXO95231 258 aa10.11□□□□□ -0.79
USHBP1-207ENST00000597928 FOSL1P15407 271 aa10.11□□□□□ -0.79
USHBP1-207ENST00000597928 CCKARP32238 428 aa10.11□□□□□ -0.79
USHBP1-207ENST00000597928 RITA1Q96K30 269 aa10.11□□□□□ -0.79
USHBP1-207ENST00000597928 PRO3102Q9H379 93 aa10.11□□□□□ -0.79
USHBP1-207ENST00000597928 NOTCH2Q04721 2471 aa10.11□□□□□ -0.79
USHBP1-207ENST00000597928 MYO9AB2RTY4 2548 aa10.11□□□□□ -0.79
USHBP1-207ENST00000597928 ACTL10Q5JWF8 245 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms