RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 MFAP2P55001 183 aa11.35□□□□□ -0.59
TGFB1-202ENST00000597453 TM4SF20Q53R12 229 aa11.35□□□□□ -0.59
TGFB1-202ENST00000597453 MZT2BQ6NZ67 158 aa11.35□□□□□ -0.59
TGFB1-202ENST00000597453 BTNL8Q6UX41 500 aa11.35□□□□□ -0.59
TGFB1-202ENST00000597453 Q6ZRM9 215 aa11.35□□□□□ -0.59
TGFB1-202ENST00000597453 LGI3Q8N145 548 aa11.35□□□□□ -0.59
TGFB1-202ENST00000597453 OR1P1Q8NH06 330 aa11.35□□□□□ -0.59
TGFB1-202ENST00000597453 ZNF502Q8TBZ5 544 aa11.35□□□□□ -0.59
TGFB1-202ENST00000597453 PRR13Q9NZ81 148 aa11.35□□□□□ -0.59
TGFB1-202ENST00000597453 A0A0B4J2A0 478 aa11.34□□□□□ -0.59
TGFB1-202ENST00000597453 IGHV3-35A0A0C4DH35 117 aa11.34□□□□□ -0.59
TGFB1-202ENST00000597453 ATP6V1G1O75348 118 aa11.34□□□□□ -0.59
TGFB1-202ENST00000597453 IFNA17P01571 189 aa11.34□□□□□ -0.59
TGFB1-202ENST00000597453 VAMP1P23763 118 aa11.34□□□□□ -0.59
TGFB1-202ENST00000597453 UBE2MP61081 183 aaKnown RBP11.34□□□□□ -0.59
TGFB1-202ENST00000597453 CD300CQ08708 224 aa11.34□□□□□ -0.59
TGFB1-202ENST00000597453 SLC25A24Q6NUK1 477 aa11.34□□□□□ -0.59
TGFB1-202ENST00000597453 SLC16A13Q7RTY0 426 aa11.34□□□□□ -0.59
TGFB1-202ENST00000597453 DUSP18Q8NEJ0 188 aa11.34□□□□□ -0.59
TGFB1-202ENST00000597453 VN1R17PQ8TDU5 208 aa11.34□□□□□ -0.59
TGFB1-202ENST00000597453 GPR146Q96CH1 333 aa11.34□□□□□ -0.59
TGFB1-202ENST00000597453 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.34□□□□□ -0.59
TGFB1-202ENST00000597453 CACNG5Q9UF02 275 aa11.34□□□□□ -0.59
TGFB1-202ENST00000597453 SHPKQ9UHJ6 478 aa11.34□□□□□ -0.59
TGFB1-202ENST00000597453 DUXBA0A1W2PPF3 345 aa11.33□□□□□ -0.6
TGFB1-202ENST00000597453 PLA2G10O15496 165 aa11.33□□□□□ -0.6
TGFB1-202ENST00000597453 CCNKO75909 580 aa11.33□□□□□ -0.6
TGFB1-202ENST00000597453 SFT2D2O95562 160 aa11.33□□□□□ -0.6
TGFB1-202ENST00000597453 HOXA1P49639 335 aaPredicted RBP11.33□□□□□ -0.6
TGFB1-202ENST00000597453 ERHP84090 104 aaKnown RBP11.33□□□□□ -0.6
TGFB1-202ENST00000597453 PPP1R1AQ13522 171 aa11.33□□□□□ -0.6
TGFB1-202ENST00000597453 SPINK9Q5DT21 86 aa11.33□□□□□ -0.6
TGFB1-202ENST00000597453 NMSQ5H8A3 153 aa11.33□□□□□ -0.6
TGFB1-202ENST00000597453 LRTM2Q8N967 370 aa11.33□□□□□ -0.6
TGFB1-202ENST00000597453 OR52B4Q8NGK2 314 aa11.33□□□□□ -0.6
TGFB1-202ENST00000597453 OR52E5Q8NH55 327 aa11.33□□□□□ -0.6
TGFB1-202ENST00000597453 CACFD1Q9UGQ2 172 aa11.33□□□□□ -0.6
TGFB1-202ENST00000597453 RGS13O14921 159 aa11.32□□□□□ -0.6
TGFB1-202ENST00000597453 LYRM1O43325 122 aa11.32□□□□□ -0.6
TGFB1-202ENST00000597453 C8orf88P0DMB2 117 aa11.32□□□□□ -0.6
TGFB1-202ENST00000597453 SULT1A3P0DMM9 295 aa11.32□□□□□ -0.6
TGFB1-202ENST00000597453 SULT1A4P0DMN0 295 aa11.32□□□□□ -0.6
TGFB1-202ENST00000597453 SPCS3P61009 180 aa11.32□□□□□ -0.6
TGFB1-202ENST00000597453 PLET1Q6UQ28 207 aa11.32□□□□□ -0.6
TGFB1-202ENST00000597453 LYZL2Q7Z4W2 148 aa11.32□□□□□ -0.6
TGFB1-202ENST00000597453 ENKURQ8TC29 256 aa11.32□□□□□ -0.6
TGFB1-202ENST00000597453 ATP6V0BQ99437 205 aa11.32□□□□□ -0.6
TGFB1-202ENST00000597453 ZNF436Q9C0F3 470 aaPredicted RBP11.32□□□□□ -0.6
TGFB1-202ENST00000597453 ENY2Q9NPA8 101 aa11.32□□□□□ -0.6
TGFB1-202ENST00000597453 IGHV3-21A0A0B4J1V1 117 aa11.31□□□□□ -0.6
TGFB1-202ENST00000597453 K7EIM0 57 aa11.31□□□□□ -0.6
TGFB1-202ENST00000597453 TGOLN2O43493 480 aa11.31□□□□□ -0.6
TGFB1-202ENST00000597453 SMCO1Q147U7 214 aa11.31□□□□□ -0.6
TGFB1-202ENST00000597453 NDUFA5Q16718 116 aa11.31□□□□□ -0.6
TGFB1-202ENST00000597453 ANKRD55Q3KP44 614 aa11.31□□□□□ -0.6
TGFB1-202ENST00000597453 TMEM190Q8WZ59 177 aa11.31□□□□□ -0.6
TGFB1-202ENST00000597453 MARC2Q969Z3 335 aa11.31□□□□□ -0.6
TGFB1-202ENST00000597453 GGTLC1Q9BX51 225 aa11.31□□□□□ -0.6
TGFB1-202ENST00000597453 MRPL27Q9P0M9 148 aaKnown RBP11.31□□□□□ -0.6
TGFB1-202ENST00000597453 FLVCR2Q9UPI3 526 aa11.31□□□□□ -0.6
TGFB1-202ENST00000597453 UFC1Q9Y3C8 167 aa11.31□□□□□ -0.6
TGFB1-202ENST00000597453 OR2T8A6NH00 312 aa11.3□□□□□ -0.6
TGFB1-202ENST00000597453 SNCAP37840 140 aa11.3□□□□□ -0.6
TGFB1-202ENST00000597453 ELLP55199 621 aaPredicted RBP11.3□□□□□ -0.6
TGFB1-202ENST00000597453 PVRIGQ6DKI7 326 aa11.3□□□□□ -0.6
TGFB1-202ENST00000597453 IL17DQ8TAD2 202 aa11.3□□□□□ -0.6
TGFB1-202ENST00000597453 SCARB1Q8WTV0 552 aa11.3□□□□□ -0.6
TGFB1-202ENST00000597453 MISP3Q96FF7 219 aa11.3□□□□□ -0.6
TGFB1-202ENST00000597453 OVOL2Q9BRP0 275 aa11.3□□□□□ -0.6
TGFB1-202ENST00000597453 C21orf62Q9NYP8 219 aa11.3□□□□□ -0.6
TGFB1-202ENST00000597453 LOC102724200A0A096LPH7 203 aaPredicted RBP11.29□□□□□ -0.6
TGFB1-202ENST00000597453 TRAV25A0A0B4J276 109 aa11.29□□□□□ -0.6
TGFB1-202ENST00000597453 A0A1B0GU03 582 aa11.29□□□□□ -0.6
TGFB1-202ENST00000597453 C9orf170A2RU37 121 aa11.29□□□□□ -0.6
TGFB1-202ENST00000597453 F8W735 103 aaPredicted RBP11.29□□□□□ -0.6
TGFB1-202ENST00000597453 I3L2K1 104 aa11.29□□□□□ -0.6
TGFB1-202ENST00000597453 CORTO00230 105 aa11.29□□□□□ -0.6
TGFB1-202ENST00000597453 RNASE2P10153 161 aaKnown RBP11.29□□□□□ -0.6
TGFB1-202ENST00000597453 BSXQ3C1V8 233 aa11.29□□□□□ -0.6
TGFB1-202ENST00000597453 RBPMS2Q6ZRY4 209 aaKnown RBP11.29□□□□□ -0.6
TGFB1-202ENST00000597453 BSCL2Q96G97 398 aaPredicted RBP11.29□□□□□ -0.6
TGFB1-202ENST00000597453 ST6GAL2Q96JF0 529 aa11.29□□□□□ -0.6
TGFB1-202ENST00000597453 MARVELD1Q9BSK0 173 aa11.29□□□□□ -0.6
TGFB1-202ENST00000597453 CHRDL1Q9BU40 450 aa11.29□□□□□ -0.6
TGFB1-202ENST00000597453 C20orf85Q9H1P6 137 aa11.29□□□□□ -0.6
TGFB1-202ENST00000597453 HSPB7Q9UBY9 170 aa11.29□□□□□ -0.6
TGFB1-202ENST00000597453 TMED3Q9Y3Q3 217 aa11.29□□□□□ -0.6
TGFB1-202ENST00000597453 MT-CO2P00403 227 aa11.28□□□□□ -0.6
TGFB1-202ENST00000597453 OR4E1P0C645 316 aa11.28□□□□□ -0.6
TGFB1-202ENST00000597453 SLC25A6P12236 298 aa11.28□□□□□ -0.6
TGFB1-202ENST00000597453 ANXA7P20073 488 aaKnown RBP11.28□□□□□ -0.6
TGFB1-202ENST00000597453 FCGR2BP31994 310 aaPredicted RBP11.28□□□□□ -0.6
TGFB1-202ENST00000597453 HTR2BP41595 481 aa11.28□□□□□ -0.6
TGFB1-202ENST00000597453 SUB1P53999 127 aaKnown RBP eCLIP11.28□□□□□ -0.6
TGFB1-202ENST00000597453 TNFRSF9Q07011 255 aa11.28□□□□□ -0.6
TGFB1-202ENST00000597453 DHRS2Q13268 280 aa11.28□□□□□ -0.6
TGFB1-202ENST00000597453 SPSB3Q6PJ21 355 aa11.28□□□□□ -0.6
TGFB1-202ENST00000597453 LYG2Q86SG7 212 aa11.28□□□□□ -0.6
TGFB1-202ENST00000597453 TCTE3Q8IZS6 198 aa11.28□□□□□ -0.6
TGFB1-202ENST00000597453 UBQLN2Q9UHD9 624 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms