RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 SLC35G3Q8N808 338 aa11.32□□□□□ -0.6
LIG1-214ENST00000597146 OR11H2Q8NH07 326 aa11.32□□□□□ -0.6
LIG1-214ENST00000597146 ZNF502Q8TBZ5 544 aa11.32□□□□□ -0.6
LIG1-214ENST00000597146 TP53RKQ96S44 253 aa11.32□□□□□ -0.6
LIG1-214ENST00000597146 C21orf62Q9NYP8 219 aa11.32□□□□□ -0.6
LIG1-214ENST00000597146 UFC1Q9Y3C8 167 aa11.32□□□□□ -0.6
LIG1-214ENST00000597146 IGHV4-4A0A075B6R2 117 aa11.31□□□□□ -0.6
LIG1-214ENST00000597146 OR2T8A6NH00 312 aa11.31□□□□□ -0.6
LIG1-214ENST00000597146 IGKV1-39P01597 117 aa11.31□□□□□ -0.6
LIG1-214ENST00000597146 IGKV1D-39P04432 117 aa11.31□□□□□ -0.6
LIG1-214ENST00000597146 FAUP35544 74 aaKnown RBP11.31□□□□□ -0.6
LIG1-214ENST00000597146 DHODHQ02127 395 aa11.31□□□□□ -0.6
LIG1-214ENST00000597146 OR51S1Q8NGJ8 323 aa11.31□□□□□ -0.6
LIG1-214ENST00000597146 OR4C16Q8NGL9 310 aa11.31□□□□□ -0.6
LIG1-214ENST00000597146 PINX1Q96BK5 328 aaKnown RBP11.31□□□□□ -0.6
LIG1-214ENST00000597146 SPAG8Q99932 426 aaPredicted RBP11.31□□□□□ -0.6
LIG1-214ENST00000597146 C20orf24Q9BUV8 137 aa11.31□□□□□ -0.6
LIG1-214ENST00000597146 SLIRPQ9GZT3 109 aaKnown RBP11.31□□□□□ -0.6
LIG1-214ENST00000597146 DNAH5Q8TE73 4624 aa11.31□□□□□ -0.6
LIG1-214ENST00000597146 TGOLN2O43493 480 aa11.3□□□□□ -0.6
LIG1-214ENST00000597146 GSTZ1O43708 216 aaPredicted RBP11.3□□□□□ -0.6
LIG1-214ENST00000597146 MFAP4P55083 255 aa11.3□□□□□ -0.6
LIG1-214ENST00000597146 AP3S2P59780 193 aa11.3□□□□□ -0.6
LIG1-214ENST00000597146 SURF2Q15527 256 aaPredicted RBP11.3□□□□□ -0.6
LIG1-214ENST00000597146 ZNF124Q15973 351 aa11.3□□□□□ -0.6
LIG1-214ENST00000597146 IZUMO4Q1ZYL8 232 aa11.3□□□□□ -0.6
LIG1-214ENST00000597146 KLK9Q2XQG4 91 aa11.3□□□□□ -0.6
LIG1-214ENST00000597146 SPINK9Q5DT21 86 aa11.3□□□□□ -0.6
LIG1-214ENST00000597146 SPSB3Q6PJ21 355 aa11.3□□□□□ -0.6
LIG1-214ENST00000597146 OR1P1Q8NH06 330 aa11.3□□□□□ -0.6
LIG1-214ENST00000597146 SCARB1Q8WTV0 552 aa11.3□□□□□ -0.6
LIG1-214ENST00000597146 GALNT14Q96FL9 552 aa11.3□□□□□ -0.6
LIG1-214ENST00000597146 BSCL2Q96G97 398 aaPredicted RBP11.3□□□□□ -0.6
LIG1-214ENST00000597146 KLK9Q9UKQ9 250 aa11.3□□□□□ -0.6
LIG1-214ENST00000597146 ANKRD20A5PA0PJZ0 165 aa11.29□□□□□ -0.6
LIG1-214ENST00000597146 DBX1A6NMT0 343 aa11.29□□□□□ -0.6
LIG1-214ENST00000597146 C11orf94C9JXX5 98 aa11.29□□□□□ -0.6
LIG1-214ENST00000597146 NUPL2O15504 423 aaKnown RBP11.29□□□□□ -0.6
LIG1-214ENST00000597146 CDK2AP2O75956 126 aa11.29□□□□□ -0.6
LIG1-214ENST00000597146 YIF1AO95070 293 aa11.29□□□□□ -0.6
LIG1-214ENST00000597146 ETV6P41212 452 aa11.29□□□□□ -0.6
LIG1-214ENST00000597146 INPP1P49441 399 aa11.29□□□□□ -0.6
LIG1-214ENST00000597146 HOXA1P49639 335 aaPredicted RBP11.29□□□□□ -0.6
LIG1-214ENST00000597146 PRCDQ00LT1 54 aa11.29□□□□□ -0.6
LIG1-214ENST00000597146 MARC2Q969Z3 335 aa11.29□□□□□ -0.6
LIG1-214ENST00000597146 NAA60Q9H7X0 242 aa11.29□□□□□ -0.6
LIG1-214ENST00000597146 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.29□□□□□ -0.6
LIG1-214ENST00000597146 IGKV1-5P01602 117 aa11.28□□□□□ -0.6
LIG1-214ENST00000597146 OR5AC1P0C628 307 aa11.28□□□□□ -0.6
LIG1-214ENST00000597146 C8orf88P0DMB2 117 aa11.28□□□□□ -0.6
LIG1-214ENST00000597146 AKR1C4P17516 323 aa11.28□□□□□ -0.6
LIG1-214ENST00000597146 UCP1P25874 307 aa11.28□□□□□ -0.6
LIG1-214ENST00000597146 APRG1Q8IVJ8 170 aa11.28□□□□□ -0.6
LIG1-214ENST00000597146 TOMM5Q8N4H5 51 aa11.28□□□□□ -0.6
LIG1-214ENST00000597146 RTBDNQ9BSG5 229 aaPredicted RBP11.28□□□□□ -0.6
LIG1-214ENST00000597146 TMEM222Q9H0R3 208 aa11.28□□□□□ -0.6
LIG1-214ENST00000597146 MRPL27Q9P0M9 148 aaKnown RBP11.28□□□□□ -0.6
LIG1-214ENST00000597146 GPR132Q9UNW8 380 aa11.28□□□□□ -0.6
LIG1-214ENST00000597146 A0A0B4J293 547 aa11.27□□□□□ -0.61
LIG1-214ENST00000597146 ST8SIA3O43173 380 aa11.27□□□□□ -0.61
LIG1-214ENST00000597146 GNG7O60262 68 aa11.27□□□□□ -0.61
LIG1-214ENST00000597146 ELLP55199 621 aaPredicted RBP11.27□□□□□ -0.61
LIG1-214ENST00000597146 RELQ04864 619 aaPredicted RBP11.27□□□□□ -0.61
LIG1-214ENST00000597146 TMEM268Q5VZI3 342 aa11.27□□□□□ -0.61
LIG1-214ENST00000597146 LAMTOR1Q6IAA8 161 aa11.27□□□□□ -0.61
LIG1-214ENST00000597146 FAM219AQ8IW50 185 aa11.27□□□□□ -0.61
LIG1-214ENST00000597146 Q8N1X5 172 aa11.27□□□□□ -0.61
LIG1-214ENST00000597146 POM121L12Q8N7R1 296 aa11.27□□□□□ -0.61
LIG1-214ENST00000597146 DUSP18Q8NEJ0 188 aa11.27□□□□□ -0.61
LIG1-214ENST00000597146 TXN2Q99757 166 aa11.27□□□□□ -0.61
LIG1-214ENST00000597146 NXF2Q9GZY0 626 aaKnown RBP11.27□□□□□ -0.61
LIG1-214ENST00000597146 CSTL1Q9H114 145 aa11.27□□□□□ -0.61
LIG1-214ENST00000597146 MPTX1A8MV57 137 aa11.26□□□□□ -0.61
LIG1-214ENST00000597146 TSPAN4O14817 238 aa11.26□□□□□ -0.61
LIG1-214ENST00000597146 CDS2O95674 445 aa11.26□□□□□ -0.61
LIG1-214ENST00000597146 MT-CO2P00403 227 aa11.26□□□□□ -0.61
LIG1-214ENST00000597146 IGHV3-48P01763 117 aa11.26□□□□□ -0.61
LIG1-214ENST00000597146 ANXA3P12429 323 aa11.26□□□□□ -0.61
LIG1-214ENST00000597146 SPANXN2Q5MJ10 180 aa11.26□□□□□ -0.61
LIG1-214ENST00000597146 Q6ZTC4 211 aa11.26□□□□□ -0.61
LIG1-214ENST00000597146 RBPMSQ93062 196 aaKnown RBP11.26□□□□□ -0.61
LIG1-214ENST00000597146 ATP6V0BQ99437 205 aa11.26□□□□□ -0.61
LIG1-214ENST00000597146 C5orf66Q9H5L9 145 aa11.26□□□□□ -0.61
LIG1-214ENST00000597146 HEYLQ9NQ87 328 aaPredicted RBP11.26□□□□□ -0.61
LIG1-214ENST00000597146 CRYM-AS1A6NIL9 109 aa11.25□□□□□ -0.61
LIG1-214ENST00000597146 CEBPZOSA8MTT3 80 aa11.25□□□□□ -0.61
LIG1-214ENST00000597146 C16orf90A8MZG2 172 aa11.25□□□□□ -0.61
LIG1-214ENST00000597146 K7EIM0 57 aa11.25□□□□□ -0.61
LIG1-214ENST00000597146 NDUFA4O00483 81 aa11.25□□□□□ -0.61
LIG1-214ENST00000597146 ZNF207O43670 478 aaKnown RBP11.25□□□□□ -0.61
LIG1-214ENST00000597146 SCGB2A1O75556 95 aa11.25□□□□□ -0.61
LIG1-214ENST00000597146 HLA-DMBP28068 263 aa11.25□□□□□ -0.61
LIG1-214ENST00000597146 NPBWR1P48145 328 aa11.25□□□□□ -0.61
LIG1-214ENST00000597146 LGALS9BQ3B8N2 356 aa11.25□□□□□ -0.61
LIG1-214ENST00000597146 PVRIGQ6DKI7 326 aa11.25□□□□□ -0.61
LIG1-214ENST00000597146 SELENOHQ8IZQ5 122 aaKnown RBP11.25□□□□□ -0.61
LIG1-214ENST00000597146 GLYATL2Q8WU03 294 aa11.25□□□□□ -0.61
LIG1-214ENST00000597146 SOSTQ9BQB4 213 aa11.25□□□□□ -0.61
LIG1-214ENST00000597146 ZNF436Q9C0F3 470 aaPredicted RBP11.25□□□□□ -0.61
LIG1-214ENST00000597146 CACFD1Q9UGQ2 172 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms