RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 CORTO00230 105 aa11.35□□□□□ -0.59
SCN1B-204ENST00000596348 LY86O95711 162 aa11.35□□□□□ -0.59
SCN1B-204ENST00000596348 H2AFB2P0C5Z0 115 aa11.35□□□□□ -0.59
SCN1B-204ENST00000596348 NPY1RP25929 384 aa11.35□□□□□ -0.59
SCN1B-204ENST00000596348 OPRK1P41145 380 aa11.35□□□□□ -0.59
SCN1B-204ENST00000596348 TMEM190Q8WZ59 177 aa11.35□□□□□ -0.59
SCN1B-204ENST00000596348 TXN2Q99757 166 aa11.35□□□□□ -0.59
SCN1B-204ENST00000596348 SEC22CQ9BRL7 303 aa11.35□□□□□ -0.59
SCN1B-204ENST00000596348 HIPK2Q9H2X6 1198 aa11.35□□□□□ -0.59
SCN1B-204ENST00000596348 IGHV3OR16-8A0A075B7F1 116 aa11.34□□□□□ -0.59
SCN1B-204ENST00000596348 FAM90A26D6RGX4 464 aa11.34□□□□□ -0.59
SCN1B-204ENST00000596348 CBLN1P23435 193 aa11.34□□□□□ -0.59
SCN1B-204ENST00000596348 MAGT1Q9H0U3 335 aa11.34□□□□□ -0.59
SCN1B-204ENST00000596348 GAR1Q9NY12 217 aaKnown RBP11.34□□□□□ -0.59
SCN1B-204ENST00000596348 LSM4Q9Y4Z0 139 aaKnown RBP11.34□□□□□ -0.59
SCN1B-204ENST00000596348 SELENOKQ9Y6D0 94 aa11.34□□□□□ -0.59
SCN1B-204ENST00000596348 NDUFA4O00483 81 aa11.33□□□□□ -0.6
SCN1B-204ENST00000596348 NUPL2O15504 423 aaKnown RBP11.33□□□□□ -0.6
SCN1B-204ENST00000596348 GNG7O60262 68 aa11.33□□□□□ -0.6
SCN1B-204ENST00000596348 IFNA10P01566 189 aa11.33□□□□□ -0.6
SCN1B-204ENST00000596348 IAPPP10997 89 aa11.33□□□□□ -0.6
SCN1B-204ENST00000596348 GP9P14770 177 aa11.33□□□□□ -0.6
SCN1B-204ENST00000596348 CD300EQ496F6 205 aaPredicted RBP11.33□□□□□ -0.6
SCN1B-204ENST00000596348 DUSP18Q8NEJ0 188 aa11.33□□□□□ -0.6
SCN1B-204ENST00000596348 RNASEH2CQ8TDP1 164 aaKnown RBP11.33□□□□□ -0.6
SCN1B-204ENST00000596348 ZNF431Q8TF32 576 aaPredicted RBP11.33□□□□□ -0.6
SCN1B-204ENST00000596348 U3KQ87 197 aa11.33□□□□□ -0.6
SCN1B-204ENST00000596348 DNAH9Q9NYC9 4486 aa11.32□□□□□ -0.6
SCN1B-204ENST00000596348 C15orf62A8K5M9 175 aa11.32□□□□□ -0.6
SCN1B-204ENST00000596348 TMEM50AO95807 157 aa11.32□□□□□ -0.6
SCN1B-204ENST00000596348 IFNA21P01568 189 aa11.32□□□□□ -0.6
SCN1B-204ENST00000596348 C8orf88P0DMB2 117 aa11.32□□□□□ -0.6
SCN1B-204ENST00000596348 NPBWR1P48145 328 aa11.32□□□□□ -0.6
SCN1B-204ENST00000596348 DEFB114Q30KQ6 69 aa11.32□□□□□ -0.6
SCN1B-204ENST00000596348 DEFB121Q5J5C9 76 aa11.32□□□□□ -0.6
SCN1B-204ENST00000596348 PRSS54Q6PEW0 395 aa11.32□□□□□ -0.6
SCN1B-204ENST00000596348 NRARPQ7Z6K4 114 aa11.32□□□□□ -0.6
SCN1B-204ENST00000596348 UXS1Q8NBZ7 420 aa11.32□□□□□ -0.6
SCN1B-204ENST00000596348 OR4D5Q8NGN0 318 aa11.32□□□□□ -0.6
SCN1B-204ENST00000596348 OR4X1Q8NH49 305 aa11.32□□□□□ -0.6
SCN1B-204ENST00000596348 ENKURQ8TC29 256 aa11.32□□□□□ -0.6
SCN1B-204ENST00000596348 DYNLRB2Q8TF09 96 aa11.32□□□□□ -0.6
SCN1B-204ENST00000596348 OR10C1Q96KK4 312 aa11.32□□□□□ -0.6
SCN1B-204ENST00000596348 PALMDQ9NP74 551 aa11.32□□□□□ -0.6
SCN1B-204ENST00000596348 MLXQ9UH92 298 aa11.32□□□□□ -0.6
SCN1B-204ENST00000596348 UFC1Q9Y3C8 167 aa11.32□□□□□ -0.6
SCN1B-204ENST00000596348 CCSO14618 274 aa11.31□□□□□ -0.6
SCN1B-204ENST00000596348 ZNF207O43670 478 aaKnown RBP11.31□□□□□ -0.6
SCN1B-204ENST00000596348 SYNGR2O43760 224 aa11.31□□□□□ -0.6
SCN1B-204ENST00000596348 CLN5O75503 358 aa11.31□□□□□ -0.6
SCN1B-204ENST00000596348 RND2P52198 227 aa11.31□□□□□ -0.6
SCN1B-204ENST00000596348 ELLP55199 621 aaPredicted RBP11.31□□□□□ -0.6
SCN1B-204ENST00000596348 ID3Q02535 119 aa11.31□□□□□ -0.6
SCN1B-204ENST00000596348 RELQ04864 619 aaPredicted RBP11.31□□□□□ -0.6
SCN1B-204ENST00000596348 LCN12Q6JVE5 192 aa11.31□□□□□ -0.6
SCN1B-204ENST00000596348 C20orf24Q9BUV8 137 aa11.31□□□□□ -0.6
SCN1B-204ENST00000596348 DAZ1Q9NQZ3 744 aaKnown RBP11.31□□□□□ -0.6
SCN1B-204ENST00000596348 RPS10-NUDT3A0A1W2PQS6 291 aa11.3□□□□□ -0.6
SCN1B-204ENST00000596348 WRBO00258 174 aa11.3□□□□□ -0.6
SCN1B-204ENST00000596348 MED6O75586 246 aa11.3□□□□□ -0.6
SCN1B-204ENST00000596348 IGKV1-17P01599 117 aa11.3□□□□□ -0.6
SCN1B-204ENST00000596348 IAH1Q2TAA2 248 aaPredicted RBP11.3□□□□□ -0.6
SCN1B-204ENST00000596348 BTNL8Q6UX41 500 aa11.3□□□□□ -0.6
SCN1B-204ENST00000596348 NOXA1Q86UR1 476 aa11.3□□□□□ -0.6
SCN1B-204ENST00000596348 TMEM61Q8N0U2 210 aa11.3□□□□□ -0.6
SCN1B-204ENST00000596348 ZBTB8BQ8NAP8 495 aaPredicted RBP11.3□□□□□ -0.6
SCN1B-204ENST00000596348 TMEM116Q8NCL8 245 aa11.3□□□□□ -0.6
SCN1B-204ENST00000596348 OR2K2Q8NGT1 345 aa11.3□□□□□ -0.6
SCN1B-204ENST00000596348 MARC2Q969Z3 335 aa11.3□□□□□ -0.6
SCN1B-204ENST00000596348 TECRQ9NZ01 308 aaKnown RBP11.3□□□□□ -0.6
SCN1B-204ENST00000596348 STAB2Q8WWQ8 2551 aa11.3□□□□□ -0.6
SCN1B-204ENST00000596348 ZNF785A8K8V0 405 aa11.29□□□□□ -0.6
SCN1B-204ENST00000596348 K7EMT4 169 aa11.29□□□□□ -0.6
SCN1B-204ENST00000596348 YIF1AO95070 293 aa11.29□□□□□ -0.6
SCN1B-204ENST00000596348 IFNA4P05014 189 aa11.29□□□□□ -0.6
SCN1B-204ENST00000596348 IL5P05113 134 aa11.29□□□□□ -0.6
SCN1B-204ENST00000596348 IGLC1P0CG04 106 aa11.29□□□□□ -0.6
SCN1B-204ENST00000596348 SLC25A4P12235 298 aa11.29□□□□□ -0.6
SCN1B-204ENST00000596348 NKX2-1P43699 371 aaPredicted RBP11.29□□□□□ -0.6
SCN1B-204ENST00000596348 POLR2GP62487 172 aaKnown RBP eCLIP11.29□□□□□ -0.6
SCN1B-204ENST00000596348 CD69Q07108 199 aa11.29□□□□□ -0.6
SCN1B-204ENST00000596348 TIGITQ495A1 244 aa11.29□□□□□ -0.6
SCN1B-204ENST00000596348 TOMM20LQ6UXN7 152 aa11.29□□□□□ -0.6
SCN1B-204ENST00000596348 SLC16A13Q7RTY0 426 aa11.29□□□□□ -0.6
SCN1B-204ENST00000596348 Q8N1Y9 231 aa11.29□□□□□ -0.6
SCN1B-204ENST00000596348 C12orf45Q8N5I9 185 aaPredicted RBP11.29□□□□□ -0.6
SCN1B-204ENST00000596348 WDR89Q96FK6 387 aaPredicted RBP11.29□□□□□ -0.6
SCN1B-204ENST00000596348 CIB3Q96Q77 187 aaPredicted RBP11.29□□□□□ -0.6
SCN1B-204ENST00000596348 ZFAND3Q9H8U3 227 aa11.29□□□□□ -0.6
SCN1B-204ENST00000596348 MRPL27Q9P0M9 148 aaKnown RBP11.29□□□□□ -0.6
SCN1B-204ENST00000596348 H3BP45 60 aa11.28□□□□□ -0.6
SCN1B-204ENST00000596348 ATP5IP56385 69 aaPredicted RBP11.28□□□□□ -0.6
SCN1B-204ENST00000596348 DEFA1P59665 94 aa11.28□□□□□ -0.6
SCN1B-204ENST00000596348 DEFA3P59666 94 aa11.28□□□□□ -0.6
SCN1B-204ENST00000596348 ZNF600Q6ZNG1 722 aa11.28□□□□□ -0.6
SCN1B-204ENST00000596348 NPIPB3Q92617 1050 aa11.28□□□□□ -0.6
SCN1B-204ENST00000596348 ACY3Q96HD9 319 aa11.28□□□□□ -0.6
SCN1B-204ENST00000596348 GSKIPQ9P0R6 139 aa11.28□□□□□ -0.6
SCN1B-204ENST00000596348 PUS1Q9Y606 427 aaKnown RBP eCLIP11.28□□□□□ -0.6
SCN1B-204ENST00000596348 TENM3Q9P273 2699 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms