RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 CHAC2Q8WUX2 184 aa8.07□□□□□ -1.12
LIG1-210ENST00000596332 EEF1AKMT3Q96AZ1 226 aa8.07□□□□□ -1.12
LIG1-210ENST00000596332 CXorf58Q96LI9 332 aa8.07□□□□□ -1.12
LIG1-210ENST00000596332 NMES1Q9C002 83 aa8.07□□□□□ -1.12
LIG1-210ENST00000596332 HIPK2Q9H2X6 1198 aa8.07□□□□□ -1.12
LIG1-210ENST00000596332 ZC4H2Q9NQZ6 224 aa8.07□□□□□ -1.12
LIG1-210ENST00000596332 C21orf62Q9NYP8 219 aa8.07□□□□□ -1.12
LIG1-210ENST00000596332 THYN1Q9P016 225 aa8.07□□□□□ -1.12
LIG1-210ENST00000596332 DNAH3Q8TD57 4116 aa8.06□□□□□ -1.12
LIG1-210ENST00000596332 IGKV1D-37A0A075B6S9 117 aa8.06□□□□□ -1.12
LIG1-210ENST00000596332 IGKV1OR2-108A0A075B7D4 117 aa8.06□□□□□ -1.12
LIG1-210ENST00000596332 G3V3Q6 166 aa8.06□□□□□ -1.12
LIG1-210ENST00000596332 H3BP45 60 aa8.06□□□□□ -1.12
LIG1-210ENST00000596332 BOLA2-SMG1P6H3BVE0 249 aa8.06□□□□□ -1.12
LIG1-210ENST00000596332 TGOLN2O43493 480 aa8.06□□□□□ -1.12
LIG1-210ENST00000596332 WIPF1O43516 503 aa8.06□□□□□ -1.12
LIG1-210ENST00000596332 SSSCA1O60232 199 aa8.06□□□□□ -1.12
LIG1-210ENST00000596332 MED6O75586 246 aa8.06□□□□□ -1.12
LIG1-210ENST00000596332 IFNA10P01566 189 aa8.06□□□□□ -1.12
LIG1-210ENST00000596332 IGKV1-17P01599 117 aa8.06□□□□□ -1.12
LIG1-210ENST00000596332 GPR183P32249 361 aa8.06□□□□□ -1.12
LIG1-210ENST00000596332 ATP5IP56385 69 aaPredicted RBP8.06□□□□□ -1.12
LIG1-210ENST00000596332 TAS2R30P59541 319 aa8.06□□□□□ -1.12
LIG1-210ENST00000596332 CD69Q07108 199 aa8.06□□□□□ -1.12
LIG1-210ENST00000596332 GAMTQ14353 236 aa8.06□□□□□ -1.12
LIG1-210ENST00000596332 Q5BKY6 102 aa8.06□□□□□ -1.12
LIG1-210ENST00000596332 UNQ9165/PRO28630Q6UXU0 137 aa8.06□□□□□ -1.12
LIG1-210ENST00000596332 GPHB5Q86YW7 130 aa8.06□□□□□ -1.12
LIG1-210ENST00000596332 PINX1Q96BK5 328 aaKnown RBP8.06□□□□□ -1.12
LIG1-210ENST00000596332 TXN2Q99757 166 aa8.06□□□□□ -1.12
LIG1-210ENST00000596332 ZNF436Q9C0F3 470 aaPredicted RBP8.06□□□□□ -1.12
LIG1-210ENST00000596332 ENY2Q9NPA8 101 aa8.06□□□□□ -1.12
LIG1-210ENST00000596332 PSENENQ9NZ42 101 aa8.06□□□□□ -1.12
LIG1-210ENST00000596332 OR5AC2Q9NZP5 309 aa8.06□□□□□ -1.12
LIG1-210ENST00000596332 MGAT4CQ9UBM8 478 aa8.06□□□□□ -1.12
LIG1-210ENST00000596332 MEGF8Q7Z7M0 2845 aa8.05□□□□□ -1.12
LIG1-210ENST00000596332 TRAV14DV4A0A0A6YYC5 116 aa8.05□□□□□ -1.12
LIG1-210ENST00000596332 OR2T8A6NH00 312 aa8.05□□□□□ -1.12
LIG1-210ENST00000596332 SSNA1O43805 119 aa8.05□□□□□ -1.12
LIG1-210ENST00000596332 GGCTO75223 188 aaKnown RBP8.05□□□□□ -1.12
LIG1-210ENST00000596332 DEDDO75618 318 aa8.05□□□□□ -1.12
LIG1-210ENST00000596332 SCGB1D2O95969 90 aa8.05□□□□□ -1.12
LIG1-210ENST00000596332 OR8U8P0C7N1 319 aa8.05□□□□□ -1.12
LIG1-210ENST00000596332 IGLL1P15814 213 aa8.05□□□□□ -1.12
LIG1-210ENST00000596332 ARL3P36405 182 aa8.05□□□□□ -1.12
LIG1-210ENST00000596332 EIF2B2P49770 351 aaKnown RBP8.05□□□□□ -1.12
LIG1-210ENST00000596332 SUB1P53999 127 aaKnown RBP eCLIP8.05□□□□□ -1.12
LIG1-210ENST00000596332 MFAP4P55083 255 aa8.05□□□□□ -1.12
LIG1-210ENST00000596332 RRAS2P62070 204 aaPredicted RBP8.05□□□□□ -1.12
LIG1-210ENST00000596332 OXLD1Q5BKU9 147 aa8.05□□□□□ -1.12
LIG1-210ENST00000596332 SPANXN5Q5MJ07 72 aa8.05□□□□□ -1.12
LIG1-210ENST00000596332 SAMD5Q5TGI4 173 aa8.05□□□□□ -1.12
LIG1-210ENST00000596332 OR4X1Q8NH49 305 aa8.05□□□□□ -1.12
LIG1-210ENST00000596332 BSCL2Q96G97 398 aaPredicted RBP8.05□□□□□ -1.12
LIG1-210ENST00000596332 CIB3Q96Q77 187 aaPredicted RBP8.05□□□□□ -1.12
LIG1-210ENST00000596332 RAB40CQ96S21 281 aa8.05□□□□□ -1.12
LIG1-210ENST00000596332 NOTCH1P46531 2555 aa8.05□□□□□ -1.12
LIG1-210ENST00000596332 NOTCH3Q9UM47 2321 aa8.04□□□□□ -1.12
LIG1-210ENST00000596332 IGHV3-35A0A0C4DH35 117 aa8.04□□□□□ -1.12
LIG1-210ENST00000596332 IGSF23A1L1A6 192 aa8.04□□□□□ -1.12
LIG1-210ENST00000596332 FAM24AA6NFZ4 105 aa8.04□□□□□ -1.12
LIG1-210ENST00000596332 G3V4G9 280 aa8.04□□□□□ -1.12
LIG1-210ENST00000596332 LGALS9O00182 355 aa8.04□□□□□ -1.12
LIG1-210ENST00000596332 CORTO00230 105 aa8.04□□□□□ -1.12
LIG1-210ENST00000596332 TSC22D2O75157 780 aa8.04□□□□□ -1.12
LIG1-210ENST00000596332 ATP6V1G1O75348 118 aa8.04□□□□□ -1.12
LIG1-210ENST00000596332 CLN5O75503 358 aa8.04□□□□□ -1.12
LIG1-210ENST00000596332 PF4P02776 101 aa8.04□□□□□ -1.12
LIG1-210ENST00000596332 CSN3P07498 182 aa8.04□□□□□ -1.12
LIG1-210ENST00000596332 IGLC1P0CG04 106 aa8.04□□□□□ -1.12
LIG1-210ENST00000596332 LYL1P12980 280 aa8.04□□□□□ -1.12
LIG1-210ENST00000596332 GPX4P36969 197 aaPredicted RBP8.04□□□□□ -1.12
LIG1-210ENST00000596332 SYNJ2BPP57105 145 aa8.04□□□□□ -1.12
LIG1-210ENST00000596332 FAM209BQ5JX69 171 aa8.04□□□□□ -1.12
LIG1-210ENST00000596332 ACSM6Q6P461 480 aa8.04□□□□□ -1.12
LIG1-210ENST00000596332 PPP1R1CQ8WVI7 109 aa8.04□□□□□ -1.12
LIG1-210ENST00000596332 NPIPB3Q92617 1050 aa8.04□□□□□ -1.12
LIG1-210ENST00000596332 DPF1Q92782 380 aa8.04□□□□□ -1.12
LIG1-210ENST00000596332 LSM5Q9Y4Y9 91 aaKnown RBP8.04□□□□□ -1.12
LIG1-210ENST00000596332 FBN3Q75N90 2809 aa8.03□□□□□ -1.12
LIG1-210ENST00000596332 TMEM213A2RRL7 107 aa8.03□□□□□ -1.12
LIG1-210ENST00000596332 OVOL1O14753 267 aa8.03□□□□□ -1.12
LIG1-210ENST00000596332 CYB5BO43169 146 aa8.03□□□□□ -1.12
LIG1-210ENST00000596332 MPC2O95563 127 aa8.03□□□□□ -1.12
LIG1-210ENST00000596332 LY86O95711 162 aa8.03□□□□□ -1.12
LIG1-210ENST00000596332 METTL15P1P0C7V9 234 aa8.03□□□□□ -1.12
LIG1-210ENST00000596332 ZP3P21754 424 aa8.03□□□□□ -1.12
LIG1-210ENST00000596332 OPRK1P41145 380 aa8.03□□□□□ -1.12
LIG1-210ENST00000596332 RND2P52198 227 aa8.03□□□□□ -1.12
LIG1-210ENST00000596332 KRTAP10-11P60412 298 aa8.03□□□□□ -1.12
LIG1-210ENST00000596332 NDUFA5Q16718 116 aa8.03□□□□□ -1.12
LIG1-210ENST00000596332 KPRPQ5T749 579 aaPredicted RBP8.03□□□□□ -1.12
LIG1-210ENST00000596332 TMEM182Q6ZP80 229 aaPredicted RBP8.03□□□□□ -1.12
LIG1-210ENST00000596332 SLC16A13Q7RTY0 426 aa8.03□□□□□ -1.12
LIG1-210ENST00000596332 REC114Q7Z4M0 266 aa8.03□□□□□ -1.12
LIG1-210ENST00000596332 TMEM252Q8N6L7 170 aa8.03□□□□□ -1.12
LIG1-210ENST00000596332 CACNG8Q8WXS5 425 aa8.03□□□□□ -1.12
LIG1-210ENST00000596332 RCC1LQ96I51 464 aaKnown RBP8.03□□□□□ -1.12
LIG1-210ENST00000596332 KRTAP3-3Q9BYR6 98 aa8.03□□□□□ -1.12
LIG1-210ENST00000596332 KRTAP3-2Q9BYR7 98 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms