RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 SPATA25Q9BR10 227 aa9.76□□□□□ -0.85
USE1-207ENST00000596136 C20orf24Q9BUV8 137 aa9.76□□□□□ -0.85
USE1-207ENST00000596136 WFDC10AQ9H1F0 79 aa9.76□□□□□ -0.85
USE1-207ENST00000596136 FNDC4Q9H6D8 234 aaPredicted RBP9.76□□□□□ -0.85
USE1-207ENST00000596136 IGHV3OR16-8A0A075B7F1 116 aa9.75□□□□□ -0.85
USE1-207ENST00000596136 PIGBOS1A0A0B4J2F0 54 aa9.75□□□□□ -0.85
USE1-207ENST00000596136 IGHV7-4-1A0A0J9YVY3 117 aa9.75□□□□□ -0.85
USE1-207ENST00000596136 CHEK1O14757 476 aa9.75□□□□□ -0.85
USE1-207ENST00000596136 SULT1A3P0DMM9 295 aa9.75□□□□□ -0.85
USE1-207ENST00000596136 SULT1A4P0DMN0 295 aa9.75□□□□□ -0.85
USE1-207ENST00000596136 ANXA3P12429 323 aa9.75□□□□□ -0.85
USE1-207ENST00000596136 CCR6P51684 374 aa9.75□□□□□ -0.85
USE1-207ENST00000596136 SRPXP78539 464 aa9.75□□□□□ -0.85
USE1-207ENST00000596136 MLANAQ16655 118 aa9.75□□□□□ -0.85
USE1-207ENST00000596136 LAMTOR1Q6IAA8 161 aa9.75□□□□□ -0.85
USE1-207ENST00000596136 LYZL2Q7Z4W2 148 aa9.75□□□□□ -0.85
USE1-207ENST00000596136 LGI3Q8N145 548 aa9.75□□□□□ -0.85
USE1-207ENST00000596136 LRTM2Q8N967 370 aa9.75□□□□□ -0.85
USE1-207ENST00000596136 OR52B4Q8NGK2 314 aa9.75□□□□□ -0.85
USE1-207ENST00000596136 OR4X1Q8NH49 305 aa9.75□□□□□ -0.85
USE1-207ENST00000596136 CITED4Q96RK1 184 aa9.75□□□□□ -0.85
USE1-207ENST00000596136 FAM110AQ9BQ89 295 aa9.75□□□□□ -0.85
USE1-207ENST00000596136 SRD5A3Q9H8P0 318 aa9.75□□□□□ -0.85
USE1-207ENST00000596136 PRR13Q9NZ81 148 aa9.75□□□□□ -0.85
USE1-207ENST00000596136 NDUFA13Q9P0J0 144 aa9.75□□□□□ -0.85
USE1-207ENST00000596136 MRPL36Q9P0J6 103 aaKnown RBP9.75□□□□□ -0.85
USE1-207ENST00000596136 HSPB7Q9UBY9 170 aa9.75□□□□□ -0.85
USE1-207ENST00000596136 TRAV14DV4A0A0A6YYC5 116 aa9.74□□□□□ -0.85
USE1-207ENST00000596136 DUXBA0A1W2PPF3 345 aa9.74□□□□□ -0.85
USE1-207ENST00000596136 C3orf84H3BNL1 204 aa9.74□□□□□ -0.85
USE1-207ENST00000596136 ZNF207O43670 478 aaKnown RBP9.74□□□□□ -0.85
USE1-207ENST00000596136 CLN5O75503 358 aa9.74□□□□□ -0.85
USE1-207ENST00000596136 SMCO1Q147U7 214 aa9.74□□□□□ -0.85
USE1-207ENST00000596136 TOMM20LQ6UXN7 152 aa9.74□□□□□ -0.85
USE1-207ENST00000596136 ZNF600Q6ZNG1 722 aa9.74□□□□□ -0.85
USE1-207ENST00000596136 RNASEH2CQ8TDP1 164 aaKnown RBP9.74□□□□□ -0.85
USE1-207ENST00000596136 TMEM170AQ8WVE7 144 aa9.74□□□□□ -0.85
USE1-207ENST00000596136 SDHCQ99643 169 aaPredicted RBP9.74□□□□□ -0.85
USE1-207ENST00000596136 HIPK2Q9H2X6 1198 aa9.74□□□□□ -0.85
USE1-207ENST00000596136 ZFAND3Q9H8U3 227 aa9.74□□□□□ -0.85
USE1-207ENST00000596136 EDA2RQ9HAV5 297 aa9.74□□□□□ -0.85
USE1-207ENST00000596136 HEYLQ9NQ87 328 aaPredicted RBP9.74□□□□□ -0.85
USE1-207ENST00000596136 A0A1B0GU03 582 aa9.73□□□□□ -0.85
USE1-207ENST00000596136 PITX3O75364 302 aa9.73□□□□□ -0.85
USE1-207ENST00000596136 YIF1AO95070 293 aa9.73□□□□□ -0.85
USE1-207ENST00000596136 OPRK1P41145 380 aa9.73□□□□□ -0.85
USE1-207ENST00000596136 TNFRSF9Q07011 255 aa9.73□□□□□ -0.85
USE1-207ENST00000596136 BAK1Q16611 211 aa9.73□□□□□ -0.85
USE1-207ENST00000596136 FAM90A2PQ658T7 463 aa9.73□□□□□ -0.85
USE1-207ENST00000596136 TMEM116Q8NCL8 245 aa9.73□□□□□ -0.85
USE1-207ENST00000596136 RNF2Q99496 336 aa9.73□□□□□ -0.85
USE1-207ENST00000596136 RHPN1-AS1Q9BWJ2 59 aa9.73□□□□□ -0.85
USE1-207ENST00000596136 CSMD3Q7Z407 3707 aa9.73□□□□□ -0.85
USE1-207ENST00000596136 TRAV30A0A087WSZ9 112 aa9.72□□□□□ -0.85
USE1-207ENST00000596136 RPS10-NUDT3A0A1W2PQS6 291 aa9.72□□□□□ -0.85
USE1-207ENST00000596136 NAP1L6A6NFF2 107 aa9.72□□□□□ -0.85
USE1-207ENST00000596136 CEBPZOSA8MTT3 80 aa9.72□□□□□ -0.85
USE1-207ENST00000596136 IGKV1-17P01599 117 aa9.72□□□□□ -0.85
USE1-207ENST00000596136 CD5P06127 495 aa9.72□□□□□ -0.85
USE1-207ENST00000596136 SLC25A4P12235 298 aa9.72□□□□□ -0.85
USE1-207ENST00000596136 SLC25A6P12236 298 aa9.72□□□□□ -0.85
USE1-207ENST00000596136 ATP5IP56385 69 aaPredicted RBP9.72□□□□□ -0.85
USE1-207ENST00000596136 UBE2MP61081 183 aaKnown RBP9.72□□□□□ -0.85
USE1-207ENST00000596136 RBMS2Q15434 407 aaKnown RBP9.72□□□□□ -0.85
USE1-207ENST00000596136 TMED4Q7Z7H5 227 aa9.72□□□□□ -0.85
USE1-207ENST00000596136 NOXA1Q86UR1 476 aa9.72□□□□□ -0.85
USE1-207ENST00000596136 SLC24A4Q8NFF2 622 aa9.72□□□□□ -0.85
USE1-207ENST00000596136 MUC7Q8TAX7 377 aa9.72□□□□□ -0.85
USE1-207ENST00000596136 GINS3Q9BRX5 216 aa9.72□□□□□ -0.85
USE1-207ENST00000596136 VSIRQ9H7M9 311 aa9.72□□□□□ -0.85
USE1-207ENST00000596136 PUS1Q9Y606 427 aaKnown RBP eCLIP9.72□□□□□ -0.85
USE1-207ENST00000596136 U3KQ87 197 aa9.72□□□□□ -0.85
USE1-207ENST00000596136 OR4C46A6NHA9 309 aa9.71□□□□□ -0.86
USE1-207ENST00000596136 SFT2D2O95562 160 aa9.71□□□□□ -0.86
USE1-207ENST00000596136 NPY1RP25929 384 aa9.71□□□□□ -0.86
USE1-207ENST00000596136 ODF3L2Q3SX64 289 aa9.71□□□□□ -0.86
USE1-207ENST00000596136 PRSS54Q6PEW0 395 aa9.71□□□□□ -0.86
USE1-207ENST00000596136 STARD9Q9P2P6 4700 aa9.7□□□□□ -0.86
USE1-207ENST00000596136 RYR3Q15413 4870 aa9.7□□□□□ -0.86
USE1-207ENST00000596136 SCGB2A1O75556 95 aa9.7□□□□□ -0.86
USE1-207ENST00000596136 NDUFB6O95139 128 aa9.7□□□□□ -0.86
USE1-207ENST00000596136 IGLC1P0CG04 106 aa9.7□□□□□ -0.86
USE1-207ENST00000596136 PPP1R1AQ13522 171 aa9.7□□□□□ -0.86
USE1-207ENST00000596136 ETFRF1Q6IPR1 90 aa9.7□□□□□ -0.86
USE1-207ENST00000596136 CENPSQ8N2Z9 138 aa9.7□□□□□ -0.86
USE1-207ENST00000596136 LILRB2Q8N423 598 aa9.7□□□□□ -0.86
USE1-207ENST00000596136 DTD1Q8TEA8 209 aa9.7□□□□□ -0.86
USE1-207ENST00000596136 RBKSQ9H477 322 aa9.7□□□□□ -0.86
USE1-207ENST00000596136 TMED3Q9Y3Q3 217 aa9.7□□□□□ -0.86
USE1-207ENST00000596136 LOC102724200A0A096LPH7 203 aaPredicted RBP9.69□□□□□ -0.86
USE1-207ENST00000596136 IGHV3-49A0A0A0MS15 119 aa9.69□□□□□ -0.86
USE1-207ENST00000596136 FAM90A26D6RGX4 464 aa9.69□□□□□ -0.86
USE1-207ENST00000596136 NXPH3O95157 252 aa9.69□□□□□ -0.86
USE1-207ENST00000596136 APOHP02749 345 aaPredicted RBP9.69□□□□□ -0.86
USE1-207ENST00000596136 VAMP1P23763 118 aa9.69□□□□□ -0.86
USE1-207ENST00000596136 CRYBB3P26998 211 aa9.69□□□□□ -0.86
USE1-207ENST00000596136 BMI1P35226 326 aa9.69□□□□□ -0.86
USE1-207ENST00000596136 CMC4P56277 68 aaPredicted RBP9.69□□□□□ -0.86
USE1-207ENST00000596136 YPEL3P61236 119 aaPredicted RBP9.69□□□□□ -0.86
USE1-207ENST00000596136 TRIQKQ629K1 86 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms