RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 SAA1P0DJI8 122 aaPredicted RBP10.04□□□□□ -0.8
SCAF1-202ENST00000595242 ADCYAP1P18509 176 aa10.04□□□□□ -0.8
SCAF1-202ENST00000595242 M6PRP20645 277 aa10.04□□□□□ -0.8
SCAF1-202ENST00000595242 MC5RP33032 325 aa10.04□□□□□ -0.8
SCAF1-202ENST00000595242 FHITP49789 147 aa10.04□□□□□ -0.8
SCAF1-202ENST00000595242 ATP5IP56385 69 aaPredicted RBP10.04□□□□□ -0.8
SCAF1-202ENST00000595242 DLK1P80370 383 aa10.04□□□□□ -0.8
SCAF1-202ENST00000595242 SRSF3P84103 164 aaKnown RBP10.04□□□□□ -0.8
SCAF1-202ENST00000595242 PRCDQ00LT1 54 aa10.04□□□□□ -0.8
SCAF1-202ENST00000595242 SSX2Q16385 188 aa10.04□□□□□ -0.8
SCAF1-202ENST00000595242 OR8G2PQ6IF36 304 aa10.04□□□□□ -0.8
SCAF1-202ENST00000595242 SLC25A24Q6NUK1 477 aa10.04□□□□□ -0.8
SCAF1-202ENST00000595242 SPSB3Q6PJ21 355 aa10.04□□□□□ -0.8
SCAF1-202ENST00000595242 THNSL2Q86YJ6 484 aa10.04□□□□□ -0.8
SCAF1-202ENST00000595242 OR5B3Q8NH48 314 aa10.04□□□□□ -0.8
SCAF1-202ENST00000595242 TMEM167AQ8TBQ9 72 aa10.04□□□□□ -0.8
SCAF1-202ENST00000595242 SMDT1Q9H4I9 107 aa10.04□□□□□ -0.8
SCAF1-202ENST00000595242 FKBP11Q9NYL4 201 aa10.04□□□□□ -0.8
SCAF1-202ENST00000595242 WASHC3Q9Y3C0 194 aa10.04□□□□□ -0.8
SCAF1-202ENST00000595242 RFNGQ9Y644 331 aa10.04□□□□□ -0.8
SCAF1-202ENST00000595242 UBE2L5PA0A1B0GUS4 154 aa10.03□□□□□ -0.8
SCAF1-202ENST00000595242 hCG_1809904A0A1W2PP81 198 aa10.03□□□□□ -0.8
SCAF1-202ENST00000595242 A0A1W2PPE2 198 aa10.03□□□□□ -0.8
SCAF1-202ENST00000595242 A0A1W2PR64 198 aa10.03□□□□□ -0.8
SCAF1-202ENST00000595242 A0A1W2PRV1 198 aa10.03□□□□□ -0.8
SCAF1-202ENST00000595242 SRRM4A7MD48 611 aaKnown RBP10.03□□□□□ -0.8
SCAF1-202ENST00000595242 FNDC10F2Z333 226 aa10.03□□□□□ -0.8
SCAF1-202ENST00000595242 KBTBD11O94819 623 aa10.03□□□□□ -0.8
SCAF1-202ENST00000595242 HBE1P02100 147 aa10.03□□□□□ -0.8
SCAF1-202ENST00000595242 PRRX1P54821 245 aa10.03□□□□□ -0.8
SCAF1-202ENST00000595242 BSXQ3C1V8 233 aa10.03□□□□□ -0.8
SCAF1-202ENST00000595242 TGIF2LXQ8IUE1 241 aa10.03□□□□□ -0.8
SCAF1-202ENST00000595242 SBSPONQ8IVN8 264 aa10.03□□□□□ -0.8
SCAF1-202ENST00000595242 VSTM2AQ8TAG5 236 aa10.03□□□□□ -0.8
SCAF1-202ENST00000595242 TMEM170AQ8WVE7 144 aa10.03□□□□□ -0.8
SCAF1-202ENST00000595242 MBD3L1Q8WWY6 194 aa10.03□□□□□ -0.8
SCAF1-202ENST00000595242 MALSU1Q96EH3 234 aa10.03□□□□□ -0.8
SCAF1-202ENST00000595242 RSG1Q9BU20 258 aa10.03□□□□□ -0.8
SCAF1-202ENST00000595242 CLEC7AQ9BXN2 247 aa10.03□□□□□ -0.8
SCAF1-202ENST00000595242 KIAA1456Q9P272 454 aa10.03□□□□□ -0.8
SCAF1-202ENST00000595242 WDR83OSQ9Y284 106 aa10.03□□□□□ -0.8
SCAF1-202ENST00000595242 AMMECR1Q9Y4X0 333 aaPredicted RBP10.03□□□□□ -0.8
SCAF1-202ENST00000595242 MPDU1O75352 247 aa10.02□□□□□ -0.81
SCAF1-202ENST00000595242 IGLV2-23P01705 113 aa10.02□□□□□ -0.81
SCAF1-202ENST00000595242 H2AFB1P0C5Y9 115 aa10.02□□□□□ -0.81
SCAF1-202ENST00000595242 HOXA1P49639 335 aaPredicted RBP10.02□□□□□ -0.81
SCAF1-202ENST00000595242 TMEM41BQ5BJD5 291 aa10.02□□□□□ -0.81
SCAF1-202ENST00000595242 SPINK9Q5DT21 86 aa10.02□□□□□ -0.81
SCAF1-202ENST00000595242 FLYWCH2Q96CP2 140 aaKnown RBP10.02□□□□□ -0.81
SCAF1-202ENST00000595242 HARBI1Q96MB7 349 aa10.02□□□□□ -0.81
SCAF1-202ENST00000595242 PBDC1Q9BVG4 233 aa10.02□□□□□ -0.81
SCAF1-202ENST00000595242 TREM1Q9NP99 234 aa10.02□□□□□ -0.81
SCAF1-202ENST00000595242 HEYLQ9NQ87 328 aaPredicted RBP10.02□□□□□ -0.81
SCAF1-202ENST00000595242 FBXO7Q9Y3I1 522 aa10.02□□□□□ -0.81
SCAF1-202ENST00000595242 OR51B2Q9Y5P1 312 aa10.02□□□□□ -0.81
SCAF1-202ENST00000595242 LY6LH3BQJ8 138 aa10.01□□□□□ -0.81
SCAF1-202ENST00000595242 APOC3P02656 99 aa10.01□□□□□ -0.81
SCAF1-202ENST00000595242 MYCNOSP40205 109 aa10.01□□□□□ -0.81
SCAF1-202ENST00000595242 LGALS7P47929 136 aa10.01□□□□□ -0.81
SCAF1-202ENST00000595242 RAB11AP62491 216 aa10.01□□□□□ -0.81
SCAF1-202ENST00000595242 PMS2P11Q13670 270 aa10.01□□□□□ -0.81
SCAF1-202ENST00000595242 DIAPH2-AS1Q14236 149 aa10.01□□□□□ -0.81
SCAF1-202ENST00000595242 PEA15Q15121 130 aa10.01□□□□□ -0.81
SCAF1-202ENST00000595242 GUK1Q16774 197 aa10.01□□□□□ -0.81
SCAF1-202ENST00000595242 C8orf86Q6ZUL3 223 aa10.01□□□□□ -0.81
SCAF1-202ENST00000595242 SLC24A4Q8NFF2 622 aa10.01□□□□□ -0.81
SCAF1-202ENST00000595242 OR11H6Q8NGC7 330 aa10.01□□□□□ -0.81
SCAF1-202ENST00000595242 OR4P4Q8NGL7 312 aa10.01□□□□□ -0.81
SCAF1-202ENST00000595242 RBMXL1Q96E39 390 aaKnown RBP10.01□□□□□ -0.81
SCAF1-202ENST00000595242 NARS2Q96I59 477 aaKnown RBP10.01□□□□□ -0.81
SCAF1-202ENST00000595242 TMEM231Q9H6L2 316 aa10.01□□□□□ -0.81
SCAF1-202ENST00000595242 RPRMQ9NS64 109 aa10.01□□□□□ -0.81
SCAF1-202ENST00000595242 TBL2Q9Y4P3 447 aaKnown RBP10.01□□□□□ -0.81
SCAF1-202ENST00000595242 TEX50A0A1B0GTY4 177 aa10□□□□□ -0.81
SCAF1-202ENST00000595242 RBMY1BA6NDE4 496 aaKnown RBP10□□□□□ -0.81
SCAF1-202ENST00000595242 RBMY1EA6NEQ0 496 aaKnown RBP10□□□□□ -0.81
SCAF1-202ENST00000595242 C17orf112F2Z3M2 114 aa10□□□□□ -0.81
SCAF1-202ENST00000595242 BUB1B-PAK6H3BSN5 160 aa10□□□□□ -0.81
SCAF1-202ENST00000595242 H7C2Y5 167 aa10□□□□□ -0.81
SCAF1-202ENST00000595242 RRHO14718 337 aa10□□□□□ -0.81
SCAF1-202ENST00000595242 SCO1O75880 301 aa10□□□□□ -0.81
SCAF1-202ENST00000595242 IFNA10P01566 189 aa10□□□□□ -0.81
SCAF1-202ENST00000595242 MBP02144 154 aa10□□□□□ -0.81
SCAF1-202ENST00000595242 SFTA3P0C7M3 94 aa10□□□□□ -0.81
SCAF1-202ENST00000595242 RBMY1DP0C7P1 496 aaKnown RBP10□□□□□ -0.81
SCAF1-202ENST00000595242 FGF7P21781 194 aa10□□□□□ -0.81
SCAF1-202ENST00000595242 NPY1RP25929 384 aa10□□□□□ -0.81
SCAF1-202ENST00000595242 CD1BP29016 333 aa10□□□□□ -0.81
SCAF1-202ENST00000595242 RAB2AP61019 212 aa10□□□□□ -0.81
SCAF1-202ENST00000595242 AKR1C1Q04828 323 aa10□□□□□ -0.81
SCAF1-202ENST00000595242 C2orf83Q53S99 150 aa10□□□□□ -0.81
SCAF1-202ENST00000595242 LDLRAD2Q5SZI1 272 aa10□□□□□ -0.81
SCAF1-202ENST00000595242 SVBPQ8N300 66 aa10□□□□□ -0.81
SCAF1-202ENST00000595242 P2RX4Q99571 388 aa10□□□□□ -0.81
SCAF1-202ENST00000595242 NPCDR1Q9BY65 106 aa10□□□□□ -0.81
SCAF1-202ENST00000595242 PLEKHA3Q9HB20 300 aa10□□□□□ -0.81
SCAF1-202ENST00000595242 ENY2Q9NPA8 101 aa10□□□□□ -0.81
SCAF1-202ENST00000595242 SMAD5-AS1Q9Y6J3 95 aa10□□□□□ -0.81
SCAF1-202ENST00000595242 ODF3BA8MYP8 253 aa9.99□□□□□ -0.81
SCAF1-202ENST00000595242 C9JQL5 133 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms