RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 BSXQ3C1V8 233 aa11.04□□□□□ -0.64
USE1-205ENST00000594724 IGHV3OR16-13A0A075B7E8 117 aa11.03□□□□□ -0.64
USE1-205ENST00000594724 IGHV3-74A0A0B4J1X5 117 aa11.03□□□□□ -0.64
USE1-205ENST00000594724 A0A0B4J2A0 478 aa11.03□□□□□ -0.64
USE1-205ENST00000594724 IGHV7-4-1A0A0J9YVY3 117 aa11.03□□□□□ -0.64
USE1-205ENST00000594724 CORTO00230 105 aa11.03□□□□□ -0.64
USE1-205ENST00000594724 ANXA3P12429 323 aa11.03□□□□□ -0.64
USE1-205ENST00000594724 OPRK1P41145 380 aa11.03□□□□□ -0.64
USE1-205ENST00000594724 HTR2BP41595 481 aa11.03□□□□□ -0.64
USE1-205ENST00000594724 BAK1Q16611 211 aa11.03□□□□□ -0.64
USE1-205ENST00000594724 ANKRD55Q3KP44 614 aa11.03□□□□□ -0.64
USE1-205ENST00000594724 LAMTOR1Q6IAA8 161 aa11.03□□□□□ -0.64
USE1-205ENST00000594724 LGI3Q8N145 548 aa11.03□□□□□ -0.64
USE1-205ENST00000594724 TMEM116Q8NCL8 245 aa11.03□□□□□ -0.64
USE1-205ENST00000594724 OR10C1Q96KK4 312 aa11.03□□□□□ -0.64
USE1-205ENST00000594724 SPATA25Q9BR10 227 aa11.03□□□□□ -0.64
USE1-205ENST00000594724 RETNQ9HD89 108 aa11.03□□□□□ -0.64
USE1-205ENST00000594724 SHPKQ9UHJ6 478 aa11.03□□□□□ -0.64
USE1-205ENST00000594724 TRAV14DV4A0A0A6YYC5 116 aa11.02□□□□□ -0.65
USE1-205ENST00000594724 CHEK1O14757 476 aa11.02□□□□□ -0.65
USE1-205ENST00000594724 TSPAN4O14817 238 aa11.02□□□□□ -0.65
USE1-205ENST00000594724 TMEM128Q5BJH2 165 aa11.02□□□□□ -0.65
USE1-205ENST00000594724 NMSQ5H8A3 153 aa11.02□□□□□ -0.65
USE1-205ENST00000594724 TOMM20LQ6UXN7 152 aa11.02□□□□□ -0.65
USE1-205ENST00000594724 RNF2Q99496 336 aa11.02□□□□□ -0.65
USE1-205ENST00000594724 SPAG8Q99932 426 aaPredicted RBP11.02□□□□□ -0.65
USE1-205ENST00000594724 RHPN1-AS1Q9BWJ2 59 aa11.02□□□□□ -0.65
USE1-205ENST00000594724 UBQLN2Q9UHD9 624 aa11.02□□□□□ -0.65
USE1-205ENST00000594724 PUS1Q9Y606 427 aaKnown RBP eCLIP11.02□□□□□ -0.65
USE1-205ENST00000594724 A0A1B0GU03 582 aa11.01□□□□□ -0.65
USE1-205ENST00000594724 LINC00854A0A1B0GVQ3 168 aa11.01□□□□□ -0.65
USE1-205ENST00000594724 CLN5O75503 358 aa11.01□□□□□ -0.65
USE1-205ENST00000594724 VAMP1P23763 118 aa11.01□□□□□ -0.65
USE1-205ENST00000594724 CCR6P51684 374 aa11.01□□□□□ -0.65
USE1-205ENST00000594724 SMCO1Q147U7 214 aa11.01□□□□□ -0.65
USE1-205ENST00000594724 C2orf83Q53S99 150 aa11.01□□□□□ -0.65
USE1-205ENST00000594724 ZNF600Q6ZNG1 722 aa11.01□□□□□ -0.65
USE1-205ENST00000594724 OR4X1Q8NH49 305 aa11.01□□□□□ -0.65
USE1-205ENST00000594724 TMEM170AQ8WVE7 144 aa11.01□□□□□ -0.65
USE1-205ENST00000594724 DEDD2Q8WXF8 326 aa11.01□□□□□ -0.65
USE1-205ENST00000594724 CITED4Q96RK1 184 aa11.01□□□□□ -0.65
USE1-205ENST00000594724 SLC25A21Q9BQT8 299 aaPredicted RBP11.01□□□□□ -0.65
USE1-205ENST00000594724 HIPK2Q9H2X6 1198 aa11.01□□□□□ -0.65
USE1-205ENST00000594724 IGKV3-7A0A075B6H7 116 aa11□□□□□ -0.65
USE1-205ENST00000594724 APOHP02749 345 aaPredicted RBP11□□□□□ -0.65
USE1-205ENST00000594724 INPP1P49441 399 aa11□□□□□ -0.65
USE1-205ENST00000594724 SRPXP78539 464 aa11□□□□□ -0.65
USE1-205ENST00000594724 TNFRSF9Q07011 255 aa11□□□□□ -0.65
USE1-205ENST00000594724 TRIQKQ629K1 86 aa11□□□□□ -0.65
USE1-205ENST00000594724 SLC24A4Q8NFF2 622 aa11□□□□□ -0.65
USE1-205ENST00000594724 MUC7Q8TAX7 377 aa11□□□□□ -0.65
USE1-205ENST00000594724 SDHCQ99643 169 aaPredicted RBP11□□□□□ -0.65
USE1-205ENST00000594724 FAM110AQ9BQ89 295 aa11□□□□□ -0.65
USE1-205ENST00000594724 RBKSQ9H477 322 aa11□□□□□ -0.65
USE1-205ENST00000594724 ZFAND3Q9H8U3 227 aa11□□□□□ -0.65
USE1-205ENST00000594724 IGHV3-66A0A0C4DH42 116 aa10.99□□□□□ -0.65
USE1-205ENST00000594724 SFT2D2O95562 160 aa10.99□□□□□ -0.65
USE1-205ENST00000594724 IFNA10P01566 189 aa10.99□□□□□ -0.65
USE1-205ENST00000594724 PPP1R1AQ13522 171 aa10.99□□□□□ -0.65
USE1-205ENST00000594724 TIGITQ495A1 244 aa10.99□□□□□ -0.65
USE1-205ENST00000594724 PRSS54Q6PEW0 395 aa10.99□□□□□ -0.65
USE1-205ENST00000594724 CENPSQ8N2Z9 138 aa10.99□□□□□ -0.65
USE1-205ENST00000594724 LILRB2Q8N423 598 aa10.99□□□□□ -0.65
USE1-205ENST00000594724 OR1S1Q8NH92 325 aa10.99□□□□□ -0.65
USE1-205ENST00000594724 DTD1Q8TEA8 209 aa10.99□□□□□ -0.65
USE1-205ENST00000594724 ST8SIA2Q92186 375 aa10.99□□□□□ -0.65
USE1-205ENST00000594724 GINS3Q9BRX5 216 aa10.99□□□□□ -0.65
USE1-205ENST00000594724 NDUFA13Q9P0J0 144 aa10.99□□□□□ -0.65
USE1-205ENST00000594724 HSPB7Q9UBY9 170 aa10.99□□□□□ -0.65
USE1-205ENST00000594724 CACFD1Q9UGQ2 172 aa10.99□□□□□ -0.65
USE1-205ENST00000594724 TENM3Q9P273 2699 aa10.99□□□□□ -0.65
USE1-205ENST00000594724 RPS10-NUDT3A0A1W2PQS6 291 aa10.98□□□□□ -0.65
USE1-205ENST00000594724 C3orf84H3BNL1 204 aa10.98□□□□□ -0.65
USE1-205ENST00000594724 IGKV1-17P01599 117 aa10.98□□□□□ -0.65
USE1-205ENST00000594724 NPY1RP25929 384 aa10.98□□□□□ -0.65
USE1-205ENST00000594724 TFPI2P48307 235 aa10.98□□□□□ -0.65
USE1-205ENST00000594724 RND2P52198 227 aa10.98□□□□□ -0.65
USE1-205ENST00000594724 RBMS2Q15434 407 aaKnown RBP10.98□□□□□ -0.65
USE1-205ENST00000594724 ODF3L2Q3SX64 289 aa10.98□□□□□ -0.65
USE1-205ENST00000594724 GBGT1Q8N5D6 347 aa10.98□□□□□ -0.65
USE1-205ENST00000594724 RNASEH2CQ8TDP1 164 aaKnown RBP10.98□□□□□ -0.65
USE1-205ENST00000594724 FLVCR2Q9UPI3 526 aa10.98□□□□□ -0.65
USE1-205ENST00000594724 STAB2Q8WWQ8 2551 aa10.97□□□□□ -0.65
USE1-205ENST00000594724 LOC102724200A0A096LPH7 203 aaPredicted RBP10.97□□□□□ -0.65
USE1-205ENST00000594724 DUXBA0A1W2PPF3 345 aa10.97□□□□□ -0.65
USE1-205ENST00000594724 OR4C46A6NHA9 309 aa10.97□□□□□ -0.65
USE1-205ENST00000594724 FAM90A2PQ658T7 463 aa10.97□□□□□ -0.65
USE1-205ENST00000594724 TCF24Q7RTU0 167 aa10.97□□□□□ -0.65
USE1-205ENST00000594724 LRTM2Q8N967 370 aa10.97□□□□□ -0.65
USE1-205ENST00000594724 GGTLC1Q9BX51 225 aa10.97□□□□□ -0.65
USE1-205ENST00000594724 VSIRQ9H7M9 311 aa10.97□□□□□ -0.65
USE1-205ENST00000594724 EDA2RQ9HAV5 297 aa10.97□□□□□ -0.65
USE1-205ENST00000594724 U3KQ87 197 aa10.97□□□□□ -0.65
USE1-205ENST00000594724 TRAV30A0A087WSZ9 112 aa10.96□□□□□ -0.65
USE1-205ENST00000594724 NAP1L6A6NFF2 107 aa10.96□□□□□ -0.65
USE1-205ENST00000594724 PITX3O75364 302 aa10.96□□□□□ -0.65
USE1-205ENST00000594724 DFFBO76075 338 aa10.96□□□□□ -0.65
USE1-205ENST00000594724 NDUFB6O95139 128 aa10.96□□□□□ -0.65
USE1-205ENST00000594724 HOXB5P09067 269 aa10.96□□□□□ -0.65
USE1-205ENST00000594724 SLC25A4P12235 298 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms