RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 CD69Q07108 199 aa13.39□□□□□ -0.27
LIG1-206ENST00000594067 C3orf36Q3SXR2 165 aa13.39□□□□□ -0.27
LIG1-206ENST00000594067 E7EUB6 86 aa13.38□□□□□ -0.27
LIG1-206ENST00000594067 HYPMO75409 117 aa13.38□□□□□ -0.27
LIG1-206ENST00000594067 C3orf79P0CE67 100 aa13.38□□□□□ -0.27
LIG1-206ENST00000594067 ASPHD1Q5U4P2 390 aa13.38□□□□□ -0.27
LIG1-206ENST00000594067 MRPL54Q6P161 138 aaKnown RBP13.38□□□□□ -0.27
LIG1-206ENST00000594067 STPG4Q8N801 248 aa13.38□□□□□ -0.27
LIG1-206ENST00000594067 OR1L8Q8NGR8 309 aa13.38□□□□□ -0.27
LIG1-206ENST00000594067 OR5B3Q8NH48 314 aa13.38□□□□□ -0.27
LIG1-206ENST00000594067 SLC25A33Q9BSK2 321 aa13.38□□□□□ -0.27
LIG1-206ENST00000594067 UQCR10Q9UDW1 63 aa13.38□□□□□ -0.27
LIG1-206ENST00000594067 SMIM27A0A1W2PRY6 76 aa13.38□□□□□ -0.27
LIG1-206ENST00000594067 SIAH2O43255 324 aa13.38□□□□□ -0.27
LIG1-206ENST00000594067 C8orf88P0DMB2 117 aa13.38□□□□□ -0.27
LIG1-206ENST00000594067 SSBP2P81877 361 aaPredicted RBP13.38□□□□□ -0.27
LIG1-206ENST00000594067 C11orf42Q8N5U0 333 aa13.38□□□□□ -0.27
LIG1-206ENST00000594067 NHLRC2Q8NBF2 726 aa13.38□□□□□ -0.27
LIG1-206ENST00000594067 COMMD5Q9GZQ3 224 aa13.38□□□□□ -0.27
LIG1-206ENST00000594067 CDC42EP3Q9UKI2 254 aa13.38□□□□□ -0.27
LIG1-206ENST00000594067 RP1L1Q8IWN7 2480 aaPredicted RBP13.37□□□□□ -0.27
LIG1-206ENST00000594067 HLA-DQA1P01909 254 aa13.37□□□□□ -0.27
LIG1-206ENST00000594067 AMY1AP04745 511 aa13.37□□□□□ -0.27
LIG1-206ENST00000594067 REG1AP05451 166 aa13.37□□□□□ -0.27
LIG1-206ENST00000594067 TEX36Q5VZQ5 186 aa13.37□□□□□ -0.27
LIG1-206ENST00000594067 ZNF833PQ6ZTB9 187 aa13.37□□□□□ -0.27
LIG1-206ENST00000594067 FAM19A2Q8N3H0 131 aa13.37□□□□□ -0.27
LIG1-206ENST00000594067 SERTAD4Q9NUC0 356 aa13.37□□□□□ -0.27
LIG1-206ENST00000594067 CBY1Q9Y3M2 126 aa13.37□□□□□ -0.27
LIG1-206ENST00000594067 LINC00312Q9Y6C7 94 aa13.37□□□□□ -0.27
LIG1-206ENST00000594067 IGHV3-48P01763 117 aa13.37□□□□□ -0.27
LIG1-206ENST00000594067 IBA57Q5T440 356 aaKnown RBP13.37□□□□□ -0.27
LIG1-206ENST00000594067 TSKUQ8WUA8 353 aa13.37□□□□□ -0.27
LIG1-206ENST00000594067 DPRXA6NFQ7 191 aa13.36□□□□□ -0.27
LIG1-206ENST00000594067 K7EM74 188 aa13.36□□□□□ -0.27
LIG1-206ENST00000594067 NDUFB8O95169 186 aa13.36□□□□□ -0.27
LIG1-206ENST00000594067 APOA2P02652 100 aa13.36□□□□□ -0.27
LIG1-206ENST00000594067 IGF2BP2-AS1Q96M15 143 aa13.36□□□□□ -0.27
LIG1-206ENST00000594067 LINC00479Q96M42 142 aa13.36□□□□□ -0.27
LIG1-206ENST00000594067 WNT10AQ9GZT5 417 aa13.36□□□□□ -0.27
LIG1-206ENST00000594067 DNAJC4Q9NNZ3 241 aa13.36□□□□□ -0.27
LIG1-206ENST00000594067 NDUFA4L2Q9NRX3 87 aa13.36□□□□□ -0.27
LIG1-206ENST00000594067 CNOT1A5YKK6 2376 aaKnown RBP13.36□□□□□ -0.27
LIG1-206ENST00000594067 DYSFO75923 2080 aa13.36□□□□□ -0.27
LIG1-206ENST00000594067 A0A1W2PRE2 83 aa13.36□□□□□ -0.27
LIG1-206ENST00000594067 H0YJW9 148 aa13.36□□□□□ -0.27
LIG1-206ENST00000594067 DLL1O00548 723 aa13.36□□□□□ -0.27
LIG1-206ENST00000594067 PPOXP50336 477 aa13.36□□□□□ -0.27
LIG1-206ENST00000594067 C10orf55Q5SWW7 151 aa13.36□□□□□ -0.27
LIG1-206ENST00000594067 OSR1Q8TAX0 266 aaPredicted RBP13.36□□□□□ -0.27
LIG1-206ENST00000594067 SLC25A2Q9BXI2 301 aa13.36□□□□□ -0.27
LIG1-206ENST00000594067 NKX6-3A6NJ46 265 aa13.36□□□□□ -0.27
LIG1-206ENST00000594067 CA1P00915 261 aaPredicted RBP13.36□□□□□ -0.27
LIG1-206ENST00000594067 RPL8P62917 257 aaKnown RBP13.36□□□□□ -0.27
LIG1-206ENST00000594067 UBE2L3P68036 154 aaKnown RBP13.36□□□□□ -0.27
LIG1-206ENST00000594067 ERHP84090 104 aaKnown RBP13.36□□□□□ -0.27
LIG1-206ENST00000594067 DIAPH2-AS1Q14236 149 aa13.36□□□□□ -0.27
LIG1-206ENST00000594067 Q6ZN92 141 aa13.36□□□□□ -0.27
LIG1-206ENST00000594067 PNKDQ8N490 385 aa13.36□□□□□ -0.27
LIG1-206ENST00000594067 FAM167A-AS1Q96KT0 104 aa13.36□□□□□ -0.27
LIG1-206ENST00000594067 TXN2Q99757 166 aa13.36□□□□□ -0.27
LIG1-206ENST00000594067 C19orf24Q9BVV8 132 aa13.36□□□□□ -0.27
LIG1-206ENST00000594067 LAMTOR2Q9Y2Q5 125 aa13.36□□□□□ -0.27
LIG1-206ENST00000594067 FCN3O75636 299 aa13.35□□□□□ -0.27
LIG1-206ENST00000594067 ATP5IP56385 69 aaPredicted RBP13.35□□□□□ -0.27
LIG1-206ENST00000594067 TMEM30BQ3MIR4 351 aa13.35□□□□□ -0.27
LIG1-206ENST00000594067 GAL3ST2Q9H3Q3 398 aa13.35□□□□□ -0.27
LIG1-206ENST00000594067 TCF21O43680 179 aa13.35□□□□□ -0.27
LIG1-206ENST00000594067 PYYP10082 97 aa13.35□□□□□ -0.27
LIG1-206ENST00000594067 SLAQ13239 276 aa13.35□□□□□ -0.27
LIG1-206ENST00000594067 FAM168AQ92567 244 aa13.35□□□□□ -0.27
LIG1-206ENST00000594067 DMXL1Q9Y485 3027 aa13.35□□□□□ -0.27
LIG1-206ENST00000594067 PSMB11A5LHX3 300 aa13.34□□□□□ -0.27
LIG1-206ENST00000594067 IZUMO1RA6ND01 250 aa13.34□□□□□ -0.27
LIG1-206ENST00000594067 APCSP02743 223 aa13.34□□□□□ -0.27
LIG1-206ENST00000594067 C19orf35Q6ZS72 473 aa13.34□□□□□ -0.27
LIG1-206ENST00000594067 Q6ZS92 163 aa13.34□□□□□ -0.27
LIG1-206ENST00000594067 FLYWCH2Q96CP2 140 aaKnown RBP13.34□□□□□ -0.27
LIG1-206ENST00000594067 ZNF714Q96N38 554 aa13.34□□□□□ -0.27
LIG1-206ENST00000594067 OTOGLQ3ZCN5 2332 aa13.34□□□□□ -0.27
LIG1-206ENST00000594067 ARFGEF3Q5TH69 2177 aa13.34□□□□□ -0.27
LIG1-206ENST00000594067 HNRNPA3P51991 378 aaKnown RBP13.34□□□□□ -0.27
LIG1-206ENST00000594067 TMEM200BQ69YZ2 307 aa13.34□□□□□ -0.27
LIG1-206ENST00000594067 IGFL3Q6UXB1 125 aa13.34□□□□□ -0.27
LIG1-206ENST00000594067 WFDC8Q8IUA0 241 aa13.34□□□□□ -0.27
LIG1-206ENST00000594067 C18orf32Q8TCD1 76 aa13.34□□□□□ -0.27
LIG1-206ENST00000594067 H1FXQ92522 213 aaKnown RBP13.34□□□□□ -0.27
LIG1-206ENST00000594067 FNDC4Q9H6D8 234 aaPredicted RBP13.34□□□□□ -0.27
LIG1-206ENST00000594067 NTF3P20783 257 aa13.33□□□□□ -0.28
LIG1-206ENST00000594067 CEACAM8P31997 349 aaPredicted RBP13.33□□□□□ -0.28
LIG1-206ENST00000594067 WT1-ASQ06250 92 aa13.33□□□□□ -0.28
LIG1-206ENST00000594067 OR5AN1Q8NGI8 311 aa13.33□□□□□ -0.28
LIG1-206ENST00000594067 CACNG8Q8WXS5 425 aa13.33□□□□□ -0.28
LIG1-206ENST00000594067 NPIPB3Q92617 1050 aa13.33□□□□□ -0.28
LIG1-206ENST00000594067 SSBP3Q9BWW4 388 aaPredicted RBP13.33□□□□□ -0.28
LIG1-206ENST00000594067 CLEC7AQ9BXN2 247 aa13.33□□□□□ -0.28
LIG1-206ENST00000594067 MRPL32Q9BYC8 188 aaKnown RBP13.33□□□□□ -0.28
LIG1-206ENST00000594067 COX7A2P2O60397 106 aa13.33□□□□□ -0.28
LIG1-206ENST00000594067 TNFRSF1AP19438 455 aa13.33□□□□□ -0.28
LIG1-206ENST00000594067 USF1P22415 310 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms