RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 PLSCR4Q9NRQ2 329 aa12.45□□□□□ -0.42
CIRBP-228ENST00000590347 PLXNB1O43157 2135 aa12.45□□□□□ -0.42
CIRBP-228ENST00000590347 C9orf172C9J069 976 aa12.44□□□□□ -0.42
CIRBP-228ENST00000590347 GRPP07492 148 aa12.44□□□□□ -0.42
CIRBP-228ENST00000590347 NMUP48645 174 aa12.44□□□□□ -0.42
CIRBP-228ENST00000590347 OR4A16Q8NH70 328 aa12.44□□□□□ -0.42
CIRBP-228ENST00000590347 C11orf52Q96A22 123 aa12.44□□□□□ -0.42
CIRBP-228ENST00000590347 SPACA9Q96E40 222 aaPredicted RBP12.44□□□□□ -0.42
CIRBP-228ENST00000590347 C18orf15Q96N68 181 aa12.44□□□□□ -0.42
CIRBP-228ENST00000590347 A0A0G2JMM0 328 aa12.44□□□□□ -0.42
CIRBP-228ENST00000590347 A0A1W2PPB8 328 aa12.44□□□□□ -0.42
CIRBP-228ENST00000590347 KIR3DP1A8MWS1 328 aa12.44□□□□□ -0.42
CIRBP-228ENST00000590347 C12orf77C9JDV5 145 aa12.44□□□□□ -0.42
CIRBP-228ENST00000590347 WNT9BO14905 357 aa12.44□□□□□ -0.42
CIRBP-228ENST00000590347 PSPNO60542 156 aa12.44□□□□□ -0.42
CIRBP-228ENST00000590347 GDF1P27539 372 aa12.44□□□□□ -0.42
CIRBP-228ENST00000590347 PSG3Q16557 428 aa12.44□□□□□ -0.42
CIRBP-228ENST00000590347 RTL8BQ17RB0 113 aa12.44□□□□□ -0.42
CIRBP-228ENST00000590347 SLC25A53Q5H9E4 307 aa12.44□□□□□ -0.42
CIRBP-228ENST00000590347 ZNF391Q9UJN7 358 aa12.44□□□□□ -0.42
CIRBP-228ENST00000590347 FZR1Q9UM11 496 aa12.44□□□□□ -0.42
CIRBP-228ENST00000590347 CACNA1HO95180 2353 aa12.44□□□□□ -0.42
CIRBP-228ENST00000590347 C21orf140B9A014 251 aa12.44□□□□□ -0.42
CIRBP-228ENST00000590347 P0C879 139 aa12.44□□□□□ -0.42
CIRBP-228ENST00000590347 PPIFP30405 207 aaKnown RBP12.44□□□□□ -0.42
CIRBP-228ENST00000590347 MC5RP33032 325 aa12.44□□□□□ -0.42
CIRBP-228ENST00000590347 ZNF645Q8N7E2 425 aa12.44□□□□□ -0.42
CIRBP-228ENST00000590347 MBD6Q96DN6 1003 aa12.44□□□□□ -0.42
CIRBP-228ENST00000590347 TECTAO75443 2155 aa12.43□□□□□ -0.42
CIRBP-228ENST00000590347 SMG1Q96Q15 3661 aaKnown RBP12.43□□□□□ -0.42
CIRBP-228ENST00000590347 NAV3Q8IVL0 2385 aa12.43□□□□□ -0.42
CIRBP-228ENST00000590347 LAMTOR5O43504 91 aa12.43□□□□□ -0.42
CIRBP-228ENST00000590347 RAB31Q13636 194 aa12.43□□□□□ -0.42
CIRBP-228ENST00000590347 ETDBQ3ZM63 59 aa12.43□□□□□ -0.42
CIRBP-228ENST00000590347 DHRS13Q6UX07 377 aa12.43□□□□□ -0.42
CIRBP-228ENST00000590347 Q71RC1 249 aaPredicted RBP12.43□□□□□ -0.42
CIRBP-228ENST00000590347 PCP2Q8IVA1 136 aa12.43□□□□□ -0.42
CIRBP-228ENST00000590347 VSTM2AQ8TAG5 236 aa12.43□□□□□ -0.42
CIRBP-228ENST00000590347 C1RLQ9NZP8 487 aa12.43□□□□□ -0.42
CIRBP-228ENST00000590347 SS18L2Q9UHA2 77 aa12.43□□□□□ -0.42
CIRBP-228ENST00000590347 FAM106CPP0CH98 169 aa12.43□□□□□ -0.42
CIRBP-228ENST00000590347 APOBEC3AP31941 199 aaPredicted RBP12.43□□□□□ -0.42
CIRBP-228ENST00000590347 CATR1Q13166 79 aa12.43□□□□□ -0.42
CIRBP-228ENST00000590347 FAM106AQ4KMX7 169 aa12.43□□□□□ -0.42
CIRBP-228ENST00000590347 TIMM23BQ5SRD1 257 aa12.43□□□□□ -0.42
CIRBP-228ENST00000590347 AMTNQ6UX39 209 aa12.43□□□□□ -0.42
CIRBP-228ENST00000590347 ARPC1AQ92747 370 aa12.43□□□□□ -0.42
CIRBP-228ENST00000590347 NABP2Q9BQ15 211 aa12.43□□□□□ -0.42
CIRBP-228ENST00000590347 SPENQ96T58 3664 aaKnown RBP12.43□□□□□ -0.42
CIRBP-228ENST00000590347 A0A1W2PPM0 123 aa12.42□□□□□ -0.42
CIRBP-228ENST00000590347 PMS2CLQ68D20 193 aa12.42□□□□□ -0.42
CIRBP-228ENST00000590347 LCNL1Q6ZST4 164 aa12.42□□□□□ -0.42
CIRBP-228ENST00000590347 ZNF826PQ6ZT77 177 aa12.42□□□□□ -0.42
CIRBP-228ENST00000590347 SH2D2AQ9NP31 389 aa12.42□□□□□ -0.42
CIRBP-228ENST00000590347 B4GALT7Q9UBV7 327 aa12.42□□□□□ -0.42
CIRBP-228ENST00000590347 LOC389332A0A1B0GUA5 103 aa12.42□□□□□ -0.42
CIRBP-228ENST00000590347 FAM90A10PA6NDY2 464 aa12.42□□□□□ -0.42
CIRBP-228ENST00000590347 FAM90A18PA6NE21 464 aa12.42□□□□□ -0.42
CIRBP-228ENST00000590347 FAM90A16PA6NEW6 464 aa12.42□□□□□ -0.42
CIRBP-228ENST00000590347 FAM90A20PA6NIJ5 464 aa12.42□□□□□ -0.42
CIRBP-228ENST00000590347 FAM90A8PA6NJQ4 464 aa12.42□□□□□ -0.42
CIRBP-228ENST00000590347 FAM90A7PA6NKC0 464 aa12.42□□□□□ -0.42
CIRBP-228ENST00000590347 FAM90A22PA8MWA6 464 aa12.42□□□□□ -0.42
CIRBP-228ENST00000590347 FAM90A12PA8MX19 464 aa12.42□□□□□ -0.42
CIRBP-228ENST00000590347 FAM90A5PA8MXJ8 464 aa12.42□□□□□ -0.42
CIRBP-228ENST00000590347 FAM90A23PA8MXZ1 464 aa12.42□□□□□ -0.42
CIRBP-228ENST00000590347 ZFAND5O76080 213 aa12.42□□□□□ -0.42
CIRBP-228ENST00000590347 TNFSF15O95150 251 aa12.42□□□□□ -0.42
CIRBP-228ENST00000590347 FAM90A15PP0C7V4 464 aa12.42□□□□□ -0.42
CIRBP-228ENST00000590347 FAM90A13PP0C7W8 464 aa12.42□□□□□ -0.42
CIRBP-228ENST00000590347 FAM90A14PP0C7W9 464 aa12.42□□□□□ -0.42
CIRBP-228ENST00000590347 FAM90A24PP0C7X0 464 aa12.42□□□□□ -0.42
CIRBP-228ENST00000590347 COX8AP10176 69 aa12.42□□□□□ -0.42
CIRBP-228ENST00000590347 GCSHP23434 173 aa12.42□□□□□ -0.42
CIRBP-228ENST00000590347 Q6P435 159 aa12.42□□□□□ -0.42
CIRBP-228ENST00000590347 TEPPQ6URK8 271 aa12.42□□□□□ -0.42
CIRBP-228ENST00000590347 Q8TCH9 128 aa12.42□□□□□ -0.42
CIRBP-228ENST00000590347 LEAP2Q969E1 77 aa12.42□□□□□ -0.42
CIRBP-228ENST00000590347 CHCHD2Q9Y6H1 151 aaPredicted RBP12.42□□□□□ -0.42
CIRBP-228ENST00000590347 AREGP15514 252 aa12.42□□□□□ -0.42
CIRBP-228ENST00000590347 EDDM3AQ14507 147 aa12.42□□□□□ -0.42
CIRBP-228ENST00000590347 TMEM177Q53S58 311 aa12.42□□□□□ -0.42
CIRBP-228ENST00000590347 RPL39P5Q59GN2 51 aa12.41□□□□□ -0.42
CIRBP-228ENST00000590347 GALMQ96C23 342 aa12.41□□□□□ -0.42
CIRBP-228ENST00000590347 TXNDC17Q9BRA2 123 aa12.41□□□□□ -0.42
CIRBP-228ENST00000590347 CNOT1A5YKK6 2376 aaKnown RBP12.41□□□□□ -0.42
CIRBP-228ENST00000590347 GFRA3O60609 400 aa12.41□□□□□ -0.42
CIRBP-228ENST00000590347 TPPP3Q9BW30 176 aa12.41□□□□□ -0.42
CIRBP-228ENST00000590347 SPTBN2O15020 2390 aa12.41□□□□□ -0.42
CIRBP-228ENST00000590347 INTS1Q8N201 2190 aaKnown RBP12.41□□□□□ -0.42
CIRBP-228ENST00000590347 RP1L1Q8IWN7 2480 aaPredicted RBP12.4□□□□□ -0.42
CIRBP-228ENST00000590347 TPRP12270 2363 aaKnown RBP12.4□□□□□ -0.42
CIRBP-228ENST00000590347 A6NDN8 102 aa12.4□□□□□ -0.42
CIRBP-228ENST00000590347 J3QR06 171 aa12.4□□□□□ -0.42
CIRBP-228ENST00000590347 LINC00322Q6ZN03 302 aaPredicted RBP12.4□□□□□ -0.42
CIRBP-228ENST00000590347 ZNF497Q6ZNH5 498 aa12.4□□□□□ -0.42
CIRBP-228ENST00000590347 H1FXQ92522 213 aaKnown RBP12.4□□□□□ -0.42
CIRBP-228ENST00000590347 IGF2BP2-AS1Q96M15 143 aa12.4□□□□□ -0.42
CIRBP-228ENST00000590347 GEMIN7Q9H840 131 aaKnown RBP12.4□□□□□ -0.42
CIRBP-228ENST00000590347 LAMA5O15230 3695 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms