RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 C20orf24Q9BUV8 137 aa13.65□□□□□ -0.22
DDX39A-212ENST00000590260 RBKSQ9H477 322 aa13.65□□□□□ -0.22
DDX39A-212ENST00000590260 ZFAND3Q9H8U3 227 aa13.65□□□□□ -0.22
DDX39A-212ENST00000590260 HEYLQ9NQ87 328 aaPredicted RBP13.65□□□□□ -0.22
DDX39A-212ENST00000590260 U3KQK5 164 aa13.65□□□□□ -0.22
DDX39A-212ENST00000590260 TENM3Q9P273 2699 aa13.65□□□□□ -0.22
DDX39A-212ENST00000590260 A0A1B0GU03 582 aa13.64□□□□□ -0.23
DDX39A-212ENST00000590260 NAP1L6A6NFF2 107 aa13.64□□□□□ -0.23
DDX39A-212ENST00000590260 CEBPZOSA8MTT3 80 aa13.64□□□□□ -0.23
DDX39A-212ENST00000590260 NUPL2O15504 423 aaKnown RBP13.64□□□□□ -0.23
DDX39A-212ENST00000590260 GNG7O60262 68 aa13.64□□□□□ -0.23
DDX39A-212ENST00000590260 ANXA3P12429 323 aa13.64□□□□□ -0.23
DDX39A-212ENST00000590260 VAMP1P23763 118 aa13.64□□□□□ -0.23
DDX39A-212ENST00000590260 HTR2BP41595 481 aa13.64□□□□□ -0.23
DDX39A-212ENST00000590260 SRPXP78539 464 aa13.64□□□□□ -0.23
DDX39A-212ENST00000590260 CNPY1Q3B7I2 92 aa13.64□□□□□ -0.23
DDX39A-212ENST00000590260 GTSCR1Q86UQ5 136 aa13.64□□□□□ -0.23
DDX39A-212ENST00000590260 DEFB125Q8N687 156 aa13.64□□□□□ -0.23
DDX39A-212ENST00000590260 TM2D3Q9BRN9 247 aa13.64□□□□□ -0.23
DDX39A-212ENST00000590260 ENY2Q9NPA8 101 aa13.64□□□□□ -0.23
DDX39A-212ENST00000590260 GAR1Q9NY12 217 aaKnown RBP13.64□□□□□ -0.23
DDX39A-212ENST00000590260 C15orf62A8K5M9 175 aa13.63□□□□□ -0.23
DDX39A-212ENST00000590260 SUB1P53999 127 aaKnown RBP eCLIP13.63□□□□□ -0.23
DDX39A-212ENST00000590260 TOMM20LQ6UXN7 152 aa13.63□□□□□ -0.23
DDX39A-212ENST00000590260 DUSP18Q8NEJ0 188 aa13.63□□□□□ -0.23
DDX39A-212ENST00000590260 SLC24A4Q8NFF2 622 aa13.63□□□□□ -0.23
DDX39A-212ENST00000590260 SMPXQ9UHP9 88 aa13.63□□□□□ -0.23
DDX39A-212ENST00000590260 DNAH7Q8WXX0 4024 aa13.62□□□□□ -0.23
DDX39A-212ENST00000590260 IGHV3-49A0A0A0MS15 119 aa13.62□□□□□ -0.23
DDX39A-212ENST00000590260 IGHV7-4-1A0A0J9YVY3 117 aa13.62□□□□□ -0.23
DDX39A-212ENST00000590260 DUXBA0A1W2PPF3 345 aa13.62□□□□□ -0.23
DDX39A-212ENST00000590260 C9orf170A2RU37 121 aa13.62□□□□□ -0.23
DDX39A-212ENST00000590260 RBMY1BA6NDE4 496 aaKnown RBP13.62□□□□□ -0.23
DDX39A-212ENST00000590260 RBMY1EA6NEQ0 496 aaKnown RBP13.62□□□□□ -0.23
DDX39A-212ENST00000590260 CORTO00230 105 aa13.62□□□□□ -0.23
DDX39A-212ENST00000590260 CLN5O75503 358 aa13.62□□□□□ -0.23
DDX39A-212ENST00000590260 IGKV1-17P01599 117 aa13.62□□□□□ -0.23
DDX39A-212ENST00000590260 APOHP02749 345 aaPredicted RBP13.62□□□□□ -0.23
DDX39A-212ENST00000590260 RBMY1DP0C7P1 496 aaKnown RBP13.62□□□□□ -0.23
DDX39A-212ENST00000590260 OPRK1P41145 380 aa13.62□□□□□ -0.23
DDX39A-212ENST00000590260 NPBWR1P48145 328 aa13.62□□□□□ -0.23
DDX39A-212ENST00000590260 RELQ04864 619 aaPredicted RBP13.62□□□□□ -0.23
DDX39A-212ENST00000590260 PRSS54Q6PEW0 395 aa13.62□□□□□ -0.23
DDX39A-212ENST00000590260 LILRB2Q8N423 598 aa13.62□□□□□ -0.23
DDX39A-212ENST00000590260 OR4X1Q8NH49 305 aa13.62□□□□□ -0.23
DDX39A-212ENST00000590260 CITED4Q96RK1 184 aa13.62□□□□□ -0.23
DDX39A-212ENST00000590260 TRAV25A0A0B4J276 109 aa13.61□□□□□ -0.23
DDX39A-212ENST00000590260 CHEK1O14757 476 aa13.61□□□□□ -0.23
DDX39A-212ENST00000590260 INPP1P49441 399 aa13.61□□□□□ -0.23
DDX39A-212ENST00000590260 HAGHQ16775 308 aa13.61□□□□□ -0.23
DDX39A-212ENST00000590260 DTD1Q8TEA8 209 aa13.61□□□□□ -0.23
DDX39A-212ENST00000590260 RNF2Q99496 336 aa13.61□□□□□ -0.23
DDX39A-212ENST00000590260 C7orf50Q9BRJ6 194 aaKnown RBP13.61□□□□□ -0.23
DDX39A-212ENST00000590260 IGHV3OR16-13A0A075B7E8 117 aa13.6□□□□□ -0.23
DDX39A-212ENST00000590260 IGHV3-74A0A0B4J1X5 117 aa13.6□□□□□ -0.23
DDX39A-212ENST00000590260 MPTX1A8MV57 137 aa13.6□□□□□ -0.23
DDX39A-212ENST00000590260 TSPAN4O14817 238 aa13.6□□□□□ -0.23
DDX39A-212ENST00000590260 ADAP1O75689 374 aa13.6□□□□□ -0.23
DDX39A-212ENST00000590260 ANXA7P20073 488 aaKnown RBP13.6□□□□□ -0.23
DDX39A-212ENST00000590260 NPY1RP25929 384 aa13.6□□□□□ -0.23
DDX39A-212ENST00000590260 UBE2MP61081 183 aaKnown RBP13.6□□□□□ -0.23
DDX39A-212ENST00000590260 TIGITQ495A1 244 aa13.6□□□□□ -0.23
DDX39A-212ENST00000590260 GGNBP1Q5YKI7 109 aa13.6□□□□□ -0.23
DDX39A-212ENST00000590260 FAM90A2PQ658T7 463 aa13.6□□□□□ -0.23
DDX39A-212ENST00000590260 ZNF600Q6ZNG1 722 aa13.6□□□□□ -0.23
DDX39A-212ENST00000590260 OR1S1Q8NH92 325 aa13.6□□□□□ -0.23
DDX39A-212ENST00000590260 RNASEH2CQ8TDP1 164 aaKnown RBP13.6□□□□□ -0.23
DDX39A-212ENST00000590260 RCHY1Q96PM5 261 aa13.6□□□□□ -0.23
DDX39A-212ENST00000590260 RHPN1-AS1Q9BWJ2 59 aa13.6□□□□□ -0.23
DDX39A-212ENST00000590260 PUS1Q9Y606 427 aaKnown RBP eCLIP13.6□□□□□ -0.23
DDX39A-212ENST00000590260 OR11H12B2RN74 326 aa13.59□□□□□ -0.23
DDX39A-212ENST00000590260 YIF1AO95070 293 aa13.59□□□□□ -0.23
DDX39A-212ENST00000590260 HOXB5P09067 269 aa13.59□□□□□ -0.23
DDX39A-212ENST00000590260 OR4E1P0C645 316 aa13.59□□□□□ -0.23
DDX39A-212ENST00000590260 IGLC1P0CG04 106 aa13.59□□□□□ -0.23
DDX39A-212ENST00000590260 SLC25A6P12236 298 aa13.59□□□□□ -0.23
DDX39A-212ENST00000590260 DHRS2Q13268 280 aa13.59□□□□□ -0.23
DDX39A-212ENST00000590260 TMEM116Q8NCL8 245 aa13.59□□□□□ -0.23
DDX39A-212ENST00000590260 WWC2-AS2Q96NR7 200 aa13.59□□□□□ -0.23
DDX39A-212ENST00000590260 HIPK2Q9H2X6 1198 aa13.59□□□□□ -0.23
DDX39A-212ENST00000590260 SRD5A3Q9H8P0 318 aa13.59□□□□□ -0.23
DDX39A-212ENST00000590260 TMED3Q9Y3Q3 217 aa13.59□□□□□ -0.23
DDX39A-212ENST00000590260 LYRM1O43325 122 aa13.58□□□□□ -0.24
DDX39A-212ENST00000590260 RND2P52198 227 aa13.58□□□□□ -0.24
DDX39A-212ENST00000590260 RBPMS2Q6ZRY4 209 aaKnown RBP13.58□□□□□ -0.24
DDX39A-212ENST00000590260 OR52B4Q8NGK2 314 aa13.58□□□□□ -0.24
DDX39A-212ENST00000590260 ST8SIA2Q92186 375 aa13.58□□□□□ -0.24
DDX39A-212ENST00000590260 VSIRQ9H7M9 311 aa13.58□□□□□ -0.24
DDX39A-212ENST00000590260 STAB2Q8WWQ8 2551 aa13.57□□□□□ -0.24
DDX39A-212ENST00000590260 TRAV14DV4A0A0A6YYC5 116 aa13.57□□□□□ -0.24
DDX39A-212ENST00000590260 IAPPP10997 89 aa13.57□□□□□ -0.24
DDX39A-212ENST00000590260 ODF3L2Q3SX64 289 aa13.57□□□□□ -0.24
DDX39A-212ENST00000590260 LINC00299Q6ZSB3 139 aa13.57□□□□□ -0.24
DDX39A-212ENST00000590260 LYG2Q86SG7 212 aa13.57□□□□□ -0.24
DDX39A-212ENST00000590260 SPAG8Q99932 426 aaPredicted RBP13.57□□□□□ -0.24
DDX39A-212ENST00000590260 TUBA4BQ9H853 241 aa13.57□□□□□ -0.24
DDX39A-212ENST00000590260 TBC1D24Q9ULP9 559 aa13.57□□□□□ -0.24
DDX39A-212ENST00000590260 U3KQ87 197 aa13.57□□□□□ -0.24
DDX39A-212ENST00000590260 IFNA10P01566 189 aa13.56□□□□□ -0.24
DDX39A-212ENST00000590260 MAGT1Q9H0U3 335 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms