RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 FAM25EA8MYX2 175 aa16.25■□□□□ 0.19
ATG4D-212ENST00000590096 WRBO00258 174 aa16.25■□□□□ 0.19
ATG4D-212ENST00000590096 PRAF2O60831 178 aa16.25■□□□□ 0.19
ATG4D-212ENST00000590096 LY86O95711 162 aa16.25■□□□□ 0.19
ATG4D-212ENST00000590096 NKX2-1P43699 371 aaPredicted RBP16.25■□□□□ 0.19
ATG4D-212ENST00000590096 KRTAP10-11P60412 298 aa16.25■□□□□ 0.19
ATG4D-212ENST00000590096 OR4D5Q8NGN0 318 aa16.25■□□□□ 0.19
ATG4D-212ENST00000590096 OR10C1Q96KK4 312 aa16.25■□□□□ 0.19
ATG4D-212ENST00000590096 CHRDL1Q9BU40 450 aa16.25■□□□□ 0.19
ATG4D-212ENST00000590096 GSKIPQ9P0R6 139 aa16.25■□□□□ 0.19
ATG4D-212ENST00000590096 CCSO14618 274 aa16.24■□□□□ 0.19
ATG4D-212ENST00000590096 SCGB2A1O75556 95 aa16.24■□□□□ 0.19
ATG4D-212ENST00000590096 PRB2P02812 416 aaPredicted RBP16.24■□□□□ 0.19
ATG4D-212ENST00000590096 IFNA4P05014 189 aa16.24■□□□□ 0.19
ATG4D-212ENST00000590096 RPP30P78346 268 aaKnown RBP16.24■□□□□ 0.19
ATG4D-212ENST00000590096 ID3Q02535 119 aa16.24■□□□□ 0.19
ATG4D-212ENST00000590096 RELQ04864 619 aaPredicted RBP16.24■□□□□ 0.19
ATG4D-212ENST00000590096 ETFRF1Q6IPR1 90 aa16.24■□□□□ 0.19
ATG4D-212ENST00000590096 ZBTB8BQ8NAP8 495 aaPredicted RBP16.24■□□□□ 0.19
ATG4D-212ENST00000590096 TMEM170AQ8WVE7 144 aa16.24■□□□□ 0.19
ATG4D-212ENST00000590096 MARVELD1Q9BSK0 173 aa16.24■□□□□ 0.19
ATG4D-212ENST00000590096 FNDC4Q9H6D8 234 aaPredicted RBP16.24■□□□□ 0.19
ATG4D-212ENST00000590096 PALMDQ9NP74 551 aa16.24■□□□□ 0.19
ATG4D-212ENST00000590096 C5orf51A6NDU8 294 aa16.23■□□□□ 0.19
ATG4D-212ENST00000590096 SCGB1D2O95969 90 aa16.23■□□□□ 0.19
ATG4D-212ENST00000590096 CSN3P07498 182 aa16.23■□□□□ 0.19
ATG4D-212ENST00000590096 CTSGP08311 255 aa16.23■□□□□ 0.19
ATG4D-212ENST00000590096 ADMP35318 185 aa16.23■□□□□ 0.19
ATG4D-212ENST00000590096 RAB11AP62491 216 aa16.23■□□□□ 0.19
ATG4D-212ENST00000590096 IL34Q6ZMJ4 242 aa16.23■□□□□ 0.19
ATG4D-212ENST00000590096 ZNF436Q9C0F3 470 aaPredicted RBP16.23■□□□□ 0.19
ATG4D-212ENST00000590096 AURKAIP1Q9NWT8 199 aaPredicted RBP16.23■□□□□ 0.19
ATG4D-212ENST00000590096 PAIP2BQ9ULR5 123 aaKnown RBP16.23■□□□□ 0.19
ATG4D-212ENST00000590096 SNRPGP15A8MWD9 76 aa16.22■□□□□ 0.19
ATG4D-212ENST00000590096 A8MWP6 167 aa16.22■□□□□ 0.19
ATG4D-212ENST00000590096 NDUFA4O00483 81 aa16.22■□□□□ 0.19
ATG4D-212ENST00000590096 SLC25A4P12235 298 aa16.22■□□□□ 0.19
ATG4D-212ENST00000590096 POLR2GP62487 172 aaKnown RBP eCLIP16.22■□□□□ 0.19
ATG4D-212ENST00000590096 MLANAQ16655 118 aa16.22■□□□□ 0.19
ATG4D-212ENST00000590096 OR4X1Q8NH49 305 aa16.22■□□□□ 0.19
ATG4D-212ENST00000590096 SIGLEC8Q9NYZ4 499 aa16.22■□□□□ 0.19
ATG4D-212ENST00000590096 UFC1Q9Y3C8 167 aa16.22■□□□□ 0.19
ATG4D-212ENST00000590096 DNAH3Q8TD57 4116 aa16.21■□□□□ 0.19
ATG4D-212ENST00000590096 C2orf70A6NJV1 201 aa16.21■□□□□ 0.19
ATG4D-212ENST00000590096 CLN5O75503 358 aa16.21■□□□□ 0.19
ATG4D-212ENST00000590096 PTTG1O95997 202 aa16.21■□□□□ 0.19
ATG4D-212ENST00000590096 UNQ9165/PRO28630Q6UXU0 137 aa16.21■□□□□ 0.19
ATG4D-212ENST00000590096 TMEM190Q8WZ59 177 aa16.21■□□□□ 0.19
ATG4D-212ENST00000590096 SSSCA1O60232 199 aa16.2■□□□□ 0.18
ATG4D-212ENST00000590096 TMEM50AO95807 157 aa16.2■□□□□ 0.18
ATG4D-212ENST00000590096 IGLV1-51P01701 117 aa16.2■□□□□ 0.18
ATG4D-212ENST00000590096 GSG1LQ6UXU4 331 aa16.2■□□□□ 0.18
ATG4D-212ENST00000590096 HAPLN4Q86UW8 402 aa16.2■□□□□ 0.18
ATG4D-212ENST00000590096 DYNLRB2Q8TF09 96 aa16.2■□□□□ 0.18
ATG4D-212ENST00000590096 MRPL36Q9P0J6 103 aaKnown RBP16.2■□□□□ 0.18
ATG4D-212ENST00000590096 TRAV30A0A087WSZ9 112 aa16.19■□□□□ 0.18
ATG4D-212ENST00000590096 C15orf62A8K5M9 175 aa16.19■□□□□ 0.18
ATG4D-212ENST00000590096 YIF1AO95070 293 aa16.19■□□□□ 0.18
ATG4D-212ENST00000590096 FOLR2P14207 255 aa16.19■□□□□ 0.18
ATG4D-212ENST00000590096 SPNP16150 400 aa16.19■□□□□ 0.18
ATG4D-212ENST00000590096 RND2P52198 227 aa16.19■□□□□ 0.18
ATG4D-212ENST00000590096 ELLP55199 621 aaPredicted RBP16.19■□□□□ 0.18
ATG4D-212ENST00000590096 CD69Q07108 199 aa16.19■□□□□ 0.18
ATG4D-212ENST00000590096 SPANXN5Q5MJ07 72 aa16.19■□□□□ 0.18
ATG4D-212ENST00000590096 PRSS54Q6PEW0 395 aa16.19■□□□□ 0.18
ATG4D-212ENST00000590096 SLC16A13Q7RTY0 426 aa16.19■□□□□ 0.18
ATG4D-212ENST00000590096 C2orf50Q96LR7 162 aa16.19■□□□□ 0.18
ATG4D-212ENST00000590096 C20orf24Q9BUV8 137 aa16.19■□□□□ 0.18
ATG4D-212ENST00000590096 ZNF256Q9Y2P7 627 aaPredicted RBP16.19■□□□□ 0.18
ATG4D-212ENST00000590096 STRAPQ9Y3F4 350 aaKnown RBP16.19■□□□□ 0.18
ATG4D-212ENST00000590096 TMEM213A2RRL7 107 aa16.18■□□□□ 0.18
ATG4D-212ENST00000590096 H3BP45 60 aa16.18■□□□□ 0.18
ATG4D-212ENST00000590096 DCTN2Q13561 401 aaKnown RBP16.18■□□□□ 0.18
ATG4D-212ENST00000590096 TM4SF20Q53R12 229 aa16.18■□□□□ 0.18
ATG4D-212ENST00000590096 TMEM116Q8NCL8 245 aa16.18■□□□□ 0.18
ATG4D-212ENST00000590096 RAB40CQ96S21 281 aa16.18■□□□□ 0.18
ATG4D-212ENST00000590096 DAZ1Q9NQZ3 744 aaKnown RBP16.18■□□□□ 0.18
ATG4D-212ENST00000590096 PSENENQ9NZ42 101 aa16.18■□□□□ 0.18
ATG4D-212ENST00000590096 PRKDCP78527 4128 aaKnown RBP16.18■□□□□ 0.18
ATG4D-212ENST00000590096 MBPP02686 304 aaPredicted RBP16.17■□□□□ 0.18
ATG4D-212ENST00000590096 CBLN1P23435 193 aa16.17■□□□□ 0.18
ATG4D-212ENST00000590096 GPX4P36969 197 aaPredicted RBP16.17■□□□□ 0.18
ATG4D-212ENST00000590096 ZNF600Q6ZNG1 722 aa16.17■□□□□ 0.18
ATG4D-212ENST00000590096 MARC2Q969Z3 335 aa16.17■□□□□ 0.18
ATG4D-212ENST00000590096 ACY3Q96HD9 319 aa16.17■□□□□ 0.18
ATG4D-212ENST00000590096 SLC35E1Q96K37 410 aa16.17■□□□□ 0.18
ATG4D-212ENST00000590096 SMIM8Q96KF7 97 aa16.17■□□□□ 0.18
ATG4D-212ENST00000590096 IGHV3OR16-8A0A075B7F1 116 aa16.16■□□□□ 0.18
ATG4D-212ENST00000590096 GOSR2O14653 212 aa16.16■□□□□ 0.18
ATG4D-212ENST00000590096 SSNA1O43805 119 aa16.16■□□□□ 0.18
ATG4D-212ENST00000590096 EDN2P20800 178 aa16.16■□□□□ 0.18
ATG4D-212ENST00000590096 LCN12Q6JVE5 192 aa16.16■□□□□ 0.18
ATG4D-212ENST00000590096 ADAMTSL5Q6ZMM2 481 aa16.16■□□□□ 0.18
ATG4D-212ENST00000590096 OR1S2Q8NGQ3 325 aa16.16■□□□□ 0.18
ATG4D-212ENST00000590096 OR2K2Q8NGT1 345 aa16.16■□□□□ 0.18
ATG4D-212ENST00000590096 MRAPQ8TCY5 172 aa16.16■□□□□ 0.18
ATG4D-212ENST00000590096 CACNG8Q8WXS5 425 aa16.16■□□□□ 0.18
ATG4D-212ENST00000590096 PRR25Q96S07 402 aa16.16■□□□□ 0.18
ATG4D-212ENST00000590096 TECRQ9NZ01 308 aaKnown RBP16.16■□□□□ 0.18
ATG4D-212ENST00000590096 MRPL27Q9P0M9 148 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms