RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 A0A1B0GU03 582 aa13.24□□□□□ -0.29
H3F3B-209ENST00000589949 GNG7O60262 68 aa13.24□□□□□ -0.29
H3F3B-209ENST00000589949 IL7P13232 177 aa13.24□□□□□ -0.29
H3F3B-209ENST00000589949 MLANAQ16655 118 aa13.24□□□□□ -0.29
H3F3B-209ENST00000589949 RNASE10Q5GAN6 216 aaKnown RBP13.24□□□□□ -0.29
H3F3B-209ENST00000589949 ST8SIA2Q92186 375 aa13.24□□□□□ -0.29
H3F3B-209ENST00000589949 ZFAND3Q9H8U3 227 aa13.24□□□□□ -0.29
H3F3B-209ENST00000589949 IGHV3-66A0A0C4DH42 116 aa13.23□□□□□ -0.29
H3F3B-209ENST00000589949 GABARAPH6UMI1 98 aa13.23□□□□□ -0.29
H3F3B-209ENST00000589949 RNASE2P10153 161 aaKnown RBP13.23□□□□□ -0.29
H3F3B-209ENST00000589949 ERHP84090 104 aaKnown RBP13.23□□□□□ -0.29
H3F3B-209ENST00000589949 CEMP1Q6PRD7 247 aaPredicted RBP13.23□□□□□ -0.29
H3F3B-209ENST00000589949 Q6ZRM9 215 aa13.23□□□□□ -0.29
H3F3B-209ENST00000589949 TCF24Q7RTU0 167 aa13.23□□□□□ -0.29
H3F3B-209ENST00000589949 FAM24BQ8N5W8 94 aa13.23□□□□□ -0.29
H3F3B-209ENST00000589949 SMIM4Q8WVI0 70 aa13.23□□□□□ -0.29
H3F3B-209ENST00000589949 FNDC4Q9H6D8 234 aaPredicted RBP13.23□□□□□ -0.29
H3F3B-209ENST00000589949 VSIRQ9H7M9 311 aa13.23□□□□□ -0.29
H3F3B-209ENST00000589949 C3orf85A0A1B0GTC6 90 aa13.22□□□□□ -0.29
H3F3B-209ENST00000589949 INS-IGF2F8WCM5 200 aa13.22□□□□□ -0.29
H3F3B-209ENST00000589949 TMEM50AO95807 157 aa13.22□□□□□ -0.29
H3F3B-209ENST00000589949 TRIQKQ629K1 86 aa13.22□□□□□ -0.29
H3F3B-209ENST00000589949 ARRDC1Q8N5I2 433 aa13.22□□□□□ -0.29
H3F3B-209ENST00000589949 OR13C8Q8NGS7 320 aa13.22□□□□□ -0.29
H3F3B-209ENST00000589949 ZNF486Q96H40 463 aaPredicted RBP13.22□□□□□ -0.29
H3F3B-209ENST00000589949 DFFBO76075 338 aa13.21□□□□□ -0.29
H3F3B-209ENST00000589949 LY6G6CO95867 125 aa13.21□□□□□ -0.29
H3F3B-209ENST00000589949 CD74P04233 296 aa13.21□□□□□ -0.29
H3F3B-209ENST00000589949 AKR1C2P52895 323 aa13.21□□□□□ -0.29
H3F3B-209ENST00000589949 DEFA1P59665 94 aa13.21□□□□□ -0.29
H3F3B-209ENST00000589949 DEFA3P59666 94 aa13.21□□□□□ -0.29
H3F3B-209ENST00000589949 FAAP20Q6NZ36 180 aa13.21□□□□□ -0.29
H3F3B-209ENST00000589949 TERB2Q8NHR7 220 aa13.21□□□□□ -0.29
H3F3B-209ENST00000589949 MARCH1Q8TCQ1 289 aa13.21□□□□□ -0.29
H3F3B-209ENST00000589949 CSTL1Q9H114 145 aa13.21□□□□□ -0.29
H3F3B-209ENST00000589949 PUS1Q9Y606 427 aaKnown RBP eCLIP13.21□□□□□ -0.29
H3F3B-209ENST00000589949 NUPR2A6NF83 97 aa13.2□□□□□ -0.3
H3F3B-209ENST00000589949 IFNA17P01571 189 aa13.2□□□□□ -0.3
H3F3B-209ENST00000589949 ATF4P18848 351 aaPredicted RBP13.2□□□□□ -0.3
H3F3B-209ENST00000589949 UCP1P25874 307 aa13.2□□□□□ -0.3
H3F3B-209ENST00000589949 SNCAP37840 140 aa13.2□□□□□ -0.3
H3F3B-209ENST00000589949 INPP1P49441 399 aa13.2□□□□□ -0.3
H3F3B-209ENST00000589949 SLC35G3Q8N808 338 aa13.2□□□□□ -0.3
H3F3B-209ENST00000589949 DUSP18Q8NEJ0 188 aa13.2□□□□□ -0.3
H3F3B-209ENST00000589949 LHFPL5Q8TAF8 219 aa13.2□□□□□ -0.3
H3F3B-209ENST00000589949 TRIM63Q969Q1 353 aa13.2□□□□□ -0.3
H3F3B-209ENST00000589949 MS4A6AQ9H2W1 248 aa13.2□□□□□ -0.3
H3F3B-209ENST00000589949 TBPP20226 339 aa13.19□□□□□ -0.3
H3F3B-209ENST00000589949 NPBWR1P48145 328 aa13.19□□□□□ -0.3
H3F3B-209ENST00000589949 SSBP1Q04837 148 aaKnown RBP13.19□□□□□ -0.3
H3F3B-209ENST00000589949 RGS21Q2M5E4 152 aa13.19□□□□□ -0.3
H3F3B-209ENST00000589949 BSXQ3C1V8 233 aa13.19□□□□□ -0.3
H3F3B-209ENST00000589949 LEMD1Q68G75 181 aa13.19□□□□□ -0.3
H3F3B-209ENST00000589949 ZNF600Q6ZNG1 722 aa13.19□□□□□ -0.3
H3F3B-209ENST00000589949 TMEM229BQ8NBD8 167 aa13.19□□□□□ -0.3
H3F3B-209ENST00000589949 RTBDNQ9BSG5 229 aaPredicted RBP13.19□□□□□ -0.3
H3F3B-209ENST00000589949 MPTX1A8MV57 137 aa13.18□□□□□ -0.3
H3F3B-209ENST00000589949 RAB3DO95716 219 aa13.18□□□□□ -0.3
H3F3B-209ENST00000589949 TRIM16LQ309B1 348 aa13.18□□□□□ -0.3
H3F3B-209ENST00000589949 SCGB2B2Q4G0G5 96 aa13.18□□□□□ -0.3
H3F3B-209ENST00000589949 GINS3Q9BRX5 216 aa13.18□□□□□ -0.3
H3F3B-209ENST00000589949 COPZ2Q9P299 210 aa13.18□□□□□ -0.3
H3F3B-209ENST00000589949 TBC1D24Q9ULP9 559 aa13.18□□□□□ -0.3
H3F3B-209ENST00000589949 PLA2G10O15496 165 aa13.17□□□□□ -0.3
H3F3B-209ENST00000589949 IGKV1-17P01599 117 aa13.17□□□□□ -0.3
H3F3B-209ENST00000589949 HOXA1P49639 335 aaPredicted RBP13.17□□□□□ -0.3
H3F3B-209ENST00000589949 DEFB131AP59861 70 aa13.17□□□□□ -0.3
H3F3B-209ENST00000589949 ASAH1Q13510 395 aa13.17□□□□□ -0.3
H3F3B-209ENST00000589949 AARDQ4LEZ3 155 aa13.17□□□□□ -0.3
H3F3B-209ENST00000589949 STEAP1BQ6NZ63 245 aa13.17□□□□□ -0.3
H3F3B-209ENST00000589949 TOMM5Q8N4H5 51 aa13.17□□□□□ -0.3
H3F3B-209ENST00000589949 ZFAND1Q8TCF1 268 aa13.17□□□□□ -0.3
H3F3B-209ENST00000589949 GLYATL2Q8WU03 294 aa13.17□□□□□ -0.3
H3F3B-209ENST00000589949 PHLDA1Q8WV24 401 aaPredicted RBP13.17□□□□□ -0.3
H3F3B-209ENST00000589949 RARRES2Q99969 163 aa13.17□□□□□ -0.3
H3F3B-209ENST00000589949 DEFB4AO15263 64 aa13.16□□□□□ -0.3
H3F3B-209ENST00000589949 CLN5O75503 358 aa13.16□□□□□ -0.3
H3F3B-209ENST00000589949 CDS2O95674 445 aa13.16□□□□□ -0.3
H3F3B-209ENST00000589949 GIG44P09565 113 aaPredicted RBP13.16□□□□□ -0.3
H3F3B-209ENST00000589949 OR5AC1P0C628 307 aa13.16□□□□□ -0.3
H3F3B-209ENST00000589949 CMC4P56277 68 aaPredicted RBP13.16□□□□□ -0.3
H3F3B-209ENST00000589949 TAS2R19P59542 299 aa13.16□□□□□ -0.3
H3F3B-209ENST00000589949 NANOS2P60321 138 aaKnown RBP13.16□□□□□ -0.3
H3F3B-209ENST00000589949 RPP25LQ8N5L8 163 aaKnown RBP13.16□□□□□ -0.3
H3F3B-209ENST00000589949 OR11H2Q8NH07 326 aa13.16□□□□□ -0.3
H3F3B-209ENST00000589949 GATAD1Q8WUU5 269 aa13.16□□□□□ -0.3
H3F3B-209ENST00000589949 C7orf50Q9BRJ6 194 aaKnown RBP13.16□□□□□ -0.3
H3F3B-209ENST00000589949 TMEM222Q9H0R3 208 aa13.16□□□□□ -0.3
H3F3B-209ENST00000589949 PTTG1O95997 202 aa13.15□□□□□ -0.3
H3F3B-209ENST00000589949 AP3S2P59780 193 aa13.15□□□□□ -0.3
H3F3B-209ENST00000589949 RPL11P62913 178 aaKnown RBP13.15□□□□□ -0.3
H3F3B-209ENST00000589949 KLF9Q13886 244 aaPredicted RBP13.15□□□□□ -0.3
H3F3B-209ENST00000589949 TIGITQ495A1 244 aa13.15□□□□□ -0.3
H3F3B-209ENST00000589949 MZT2BQ6NZ67 158 aa13.15□□□□□ -0.3
H3F3B-209ENST00000589949 CCDC71LQ8N9Z2 235 aa13.15□□□□□ -0.3
H3F3B-209ENST00000589949 OR4X1Q8NH49 305 aa13.15□□□□□ -0.3
H3F3B-209ENST00000589949 TMEM170AQ8WVE7 144 aa13.15□□□□□ -0.3
H3F3B-209ENST00000589949 DEDD2Q8WXF8 326 aa13.15□□□□□ -0.3
H3F3B-209ENST00000589949 RRNAD1Q96FB5 475 aaKnown RBP13.15□□□□□ -0.3
H3F3B-209ENST00000589949 KMT2AQ03164 3969 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms