RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 FAM216BQ8N7L0 139 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 OR5D13Q8NGL4 314 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 OR11L1Q8NGX0 322 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 FAM213BQ8TBF2 198 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 MBD3L1Q8WWY6 194 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 TOMM40LQ969M1 308 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 BORCS8Q96FH0 119 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 P2RX4Q99571 388 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 GGACTQ9BVM4 153 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 PAPOLGQ9BWT3 736 aaKnown RBP6.02□□□□□ -1.45
SMAD4-209ENST00000589941 TOLLIPQ9H0E2 274 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 Q9N2K0 584 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 ZNF581Q9P0T4 197 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 TCF19Q9Y242 345 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 ZNF256Q9Y2P7 627 aaPredicted RBP6.02□□□□□ -1.45
SMAD4-209ENST00000589941 FBXO7Q9Y3I1 522 aa6.02□□□□□ -1.45
SMAD4-209ENST00000589941 TRBV24-1A0A075B6N3 115 aa6.01□□□□□ -1.45
SMAD4-209ENST00000589941 FAM24AA6NFZ4 105 aa6.01□□□□□ -1.45
SMAD4-209ENST00000589941 TMEM50AO95807 157 aa6.01□□□□□ -1.45
SMAD4-209ENST00000589941 PRH1P02810 166 aa6.01□□□□□ -1.45
SMAD4-209ENST00000589941 TFF1P04155 84 aa6.01□□□□□ -1.45
SMAD4-209ENST00000589941 CTXN2P0C2S0 81 aa6.01□□□□□ -1.45
SMAD4-209ENST00000589941 VDAC1P21796 283 aa6.01□□□□□ -1.45
SMAD4-209ENST00000589941 PAX9P55771 341 aa6.01□□□□□ -1.45
SMAD4-209ENST00000589941 RAB2AP61019 212 aa6.01□□□□□ -1.45
SMAD4-209ENST00000589941 PCBD1P61457 104 aa6.01□□□□□ -1.45
SMAD4-209ENST00000589941 KIAA0141Q14154 515 aaPredicted RBP6.01□□□□□ -1.45
SMAD4-209ENST00000589941 HAGHQ16775 308 aa6.01□□□□□ -1.45
SMAD4-209ENST00000589941 MPV17LQ2QL34 196 aa6.01□□□□□ -1.45
SMAD4-209ENST00000589941 PIGYQ3MUY2 71 aa6.01□□□□□ -1.45
SMAD4-209ENST00000589941 PHLDA2Q53GA4 152 aa6.01□□□□□ -1.45
SMAD4-209ENST00000589941 LHFPL4Q7Z7J7 247 aa6.01□□□□□ -1.45
SMAD4-209ENST00000589941 CENPVQ7Z7K6 275 aaPredicted RBP6.01□□□□□ -1.45
SMAD4-209ENST00000589941 LINC00596Q86U02 117 aa6.01□□□□□ -1.45
SMAD4-209ENST00000589941 H1FOOQ8IZA3 346 aaPredicted RBP6.01□□□□□ -1.45
SMAD4-209ENST00000589941 HSD17B11Q8NBQ5 300 aa6.01□□□□□ -1.45
SMAD4-209ENST00000589941 OR5L1Q8NGL2 311 aa6.01□□□□□ -1.45
SMAD4-209ENST00000589941 OR2G3Q8NGZ4 309 aa6.01□□□□□ -1.45
SMAD4-209ENST00000589941 Q8WTZ3 238 aa6.01□□□□□ -1.45
SMAD4-209ENST00000589941 TVP23CQ96ET8 276 aa6.01□□□□□ -1.45
SMAD4-209ENST00000589941 ATP5SQ99766 215 aa6.01□□□□□ -1.45
SMAD4-209ENST00000589941 PYGO2Q9BRQ0 406 aa6.01□□□□□ -1.45
SMAD4-209ENST00000589941 PSMG3Q9BT73 122 aaPredicted RBP6.01□□□□□ -1.45
SMAD4-209ENST00000589941 CABLES2Q9BTV7 478 aa6.01□□□□□ -1.45
SMAD4-209ENST00000589941 FAM234AQ9H0X4 552 aa6.01□□□□□ -1.45
SMAD4-209ENST00000589941 MAP6D1Q9H9H5 199 aa6.01□□□□□ -1.45
SMAD4-209ENST00000589941 ELL3Q9HB65 397 aaPredicted RBP6.01□□□□□ -1.45
SMAD4-209ENST00000589941 ST3GAL6Q9Y274 331 aa6.01□□□□□ -1.45
SMAD4-209ENST00000589941 DSCAML1Q8TD84 2053 aa6□□□□□ -1.45
SMAD4-209ENST00000589941 A0A1B0GU03 582 aa6□□□□□ -1.45
SMAD4-209ENST00000589941 SH2D7A6NKC9 451 aaPredicted RBP6□□□□□ -1.45
SMAD4-209ENST00000589941 DFFBO76075 338 aa6□□□□□ -1.45
SMAD4-209ENST00000589941 IFNA10P01566 189 aa6□□□□□ -1.45
SMAD4-209ENST00000589941 CXCL1P09341 107 aa6□□□□□ -1.45
SMAD4-209ENST00000589941 OR13C7P0DN81 318 aa6□□□□□ -1.45
SMAD4-209ENST00000589941 COX5BP10606 129 aa6□□□□□ -1.45
SMAD4-209ENST00000589941 HIST1H1BP16401 226 aaKnown RBP6□□□□□ -1.45
SMAD4-209ENST00000589941 PYY3Q5JQD4 70 aa6□□□□□ -1.45
SMAD4-209ENST00000589941 OR2B11Q5JQS5 317 aa6□□□□□ -1.45
SMAD4-209ENST00000589941 COA6Q5JTJ3 125 aaKnown RBP6□□□□□ -1.45
SMAD4-209ENST00000589941 LDLRAD2Q5SZI1 272 aa6□□□□□ -1.45
SMAD4-209ENST00000589941 ZNF826PQ6ZT77 177 aa6□□□□□ -1.45
SMAD4-209ENST00000589941 TBC1D26Q86UD7 250 aa6□□□□□ -1.45
SMAD4-209ENST00000589941 HIST3H2BBQ8N257 126 aa6□□□□□ -1.45
SMAD4-209ENST00000589941 OR2AE1Q8NHA4 323 aa6□□□□□ -1.45
SMAD4-209ENST00000589941 CD300LFQ8TDQ1 290 aa6□□□□□ -1.45
SMAD4-209ENST00000589941 LSM10Q969L4 123 aaKnown RBP6□□□□□ -1.45
SMAD4-209ENST00000589941 RARRES2Q99969 163 aa6□□□□□ -1.45
SMAD4-209ENST00000589941 AGMATQ9BSE5 352 aa6□□□□□ -1.45
SMAD4-209ENST00000589941 PARP12Q9H0J9 701 aaKnown RBP6□□□□□ -1.45
SMAD4-209ENST00000589941 RIMS4Q9H426 269 aaPredicted RBP6□□□□□ -1.45
SMAD4-209ENST00000589941 DOK5Q9P104 306 aa6□□□□□ -1.45
SMAD4-209ENST00000589941 RNF150Q9ULK6 438 aa6□□□□□ -1.45
SMAD4-209ENST00000589941 SLC7A11Q9UPY5 501 aa6□□□□□ -1.45
SMAD4-209ENST00000589941 WSB1Q9Y6I7 421 aa6□□□□□ -1.45
SMAD4-209ENST00000589941 A0A1B0GWJ7 208 aa5.99□□□□□ -1.45
SMAD4-209ENST00000589941 OOEPA6NGQ2 149 aa5.99□□□□□ -1.45
SMAD4-209ENST00000589941 TXNL1O43396 289 aa5.99□□□□□ -1.45
SMAD4-209ENST00000589941 HIST1H2BKO60814 126 aa5.99□□□□□ -1.45
SMAD4-209ENST00000589941 HIST1H2BJP06899 126 aa5.99□□□□□ -1.45
SMAD4-209ENST00000589941 IRF2P14316 349 aa5.99□□□□□ -1.45
SMAD4-209ENST00000589941 HIST1H2BOP23527 126 aa5.99□□□□□ -1.45
SMAD4-209ENST00000589941 HIST1H2BBP33778 126 aa5.99□□□□□ -1.45
SMAD4-209ENST00000589941 TAGLN2P37802 199 aaKnown RBP5.99□□□□□ -1.45
SMAD4-209ENST00000589941 CEACAM6P40199 344 aa5.99□□□□□ -1.45
SMAD4-209ENST00000589941 DYNLT3P51808 116 aa5.99□□□□□ -1.45
SMAD4-209ENST00000589941 HIST1H2BDP58876 126 aa5.99□□□□□ -1.45
SMAD4-209ENST00000589941 FXYD4P59646 89 aa5.99□□□□□ -1.45
SMAD4-209ENST00000589941 UBE2KP61086 200 aa5.99□□□□□ -1.45
SMAD4-209ENST00000589941 RPL23AP62750 156 aaKnown RBP5.99□□□□□ -1.45
SMAD4-209ENST00000589941 HIST1H2BCP62807 126 aa5.99□□□□□ -1.45
SMAD4-209ENST00000589941 HLA-DRB3P79483 266 aa5.99□□□□□ -1.45
SMAD4-209ENST00000589941 DLK1P80370 383 aa5.99□□□□□ -1.45
SMAD4-209ENST00000589941 KIR2DS1Q14954 304 aa5.99□□□□□ -1.45
SMAD4-209ENST00000589941 HIST2H2BEQ16778 126 aa5.99□□□□□ -1.45
SMAD4-209ENST00000589941 DEFB136Q30KP8 78 aa5.99□□□□□ -1.45
SMAD4-209ENST00000589941 CXorf66Q5JRM2 361 aaPredicted RBP5.99□□□□□ -1.45
SMAD4-209ENST00000589941 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.99□□□□□ -1.45
SMAD4-209ENST00000589941 ZNF429Q86V71 674 aa5.99□□□□□ -1.45
SMAD4-209ENST00000589941 OR4X2Q8NGF9 303 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms