RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 P2RY1P47900 373 aa10.53□□□□□ -0.72
VMP1-210ENST00000589823 NPBWR1P48145 328 aa10.53□□□□□ -0.72
VMP1-210ENST00000589823 CD69Q07108 199 aa10.53□□□□□ -0.72
VMP1-210ENST00000589823 DEFB136Q30KP8 78 aa10.53□□□□□ -0.72
VMP1-210ENST00000589823 OR8G2PQ6IF36 304 aa10.53□□□□□ -0.72
VMP1-210ENST00000589823 CLEC19AQ6UXS0 136 aa10.53□□□□□ -0.72
VMP1-210ENST00000589823 OR11H1Q8NG94 326 aa10.53□□□□□ -0.72
VMP1-210ENST00000589823 OR10P1Q8NGE3 313 aa10.53□□□□□ -0.72
VMP1-210ENST00000589823 OR1N2Q8NGR9 330 aa10.53□□□□□ -0.72
VMP1-210ENST00000589823 ZNF502Q8TBZ5 544 aa10.53□□□□□ -0.72
VMP1-210ENST00000589823 CHAC2Q8WUX2 184 aa10.53□□□□□ -0.72
VMP1-210ENST00000589823 ATP6V0BQ99437 205 aa10.53□□□□□ -0.72
VMP1-210ENST00000589823 TXN2Q99757 166 aa10.53□□□□□ -0.72
VMP1-210ENST00000589823 FNDC4Q9H6D8 234 aaPredicted RBP10.53□□□□□ -0.72
VMP1-210ENST00000589823 RANGRFQ9HD47 186 aaPredicted RBP10.53□□□□□ -0.72
VMP1-210ENST00000589823 LYRM2Q9NU23 88 aaPredicted RBP10.53□□□□□ -0.72
VMP1-210ENST00000589823 FAM24AA6NFZ4 105 aa10.52□□□□□ -0.73
VMP1-210ENST00000589823 LINC01619G3V211 115 aa10.52□□□□□ -0.73
VMP1-210ENST00000589823 CCL24O00175 119 aa10.52□□□□□ -0.73
VMP1-210ENST00000589823 GNG7O60262 68 aa10.52□□□□□ -0.73
VMP1-210ENST00000589823 SCGB2A1O75556 95 aa10.52□□□□□ -0.73
VMP1-210ENST00000589823 PF4P02776 101 aa10.52□□□□□ -0.73
VMP1-210ENST00000589823 CLEC3BP05452 202 aa10.52□□□□□ -0.73
VMP1-210ENST00000589823 GPR183P32249 361 aa10.52□□□□□ -0.73
VMP1-210ENST00000589823 ZNF616Q08AN1 781 aa10.52□□□□□ -0.73
VMP1-210ENST00000589823 MLANAQ16655 118 aa10.52□□□□□ -0.73
VMP1-210ENST00000589823 SLC16A13Q7RTY0 426 aa10.52□□□□□ -0.73
VMP1-210ENST00000589823 STX12Q86Y82 276 aa10.52□□□□□ -0.73
VMP1-210ENST00000589823 OR2T35Q8NGX2 323 aa10.52□□□□□ -0.73
VMP1-210ENST00000589823 CACNG8Q8WXS5 425 aa10.52□□□□□ -0.73
VMP1-210ENST00000589823 DCUN1D4Q92564 292 aa10.52□□□□□ -0.73
VMP1-210ENST00000589823 SLC35E1Q96K37 410 aa10.52□□□□□ -0.73
VMP1-210ENST00000589823 CCDC140Q96MF4 163 aa10.52□□□□□ -0.73
VMP1-210ENST00000589823 RNF126Q9BV68 326 aa10.52□□□□□ -0.73
VMP1-210ENST00000589823 SLC25A31Q9H0C2 315 aa10.52□□□□□ -0.73
VMP1-210ENST00000589823 MBD2Q9UBB5 411 aa10.52□□□□□ -0.73
VMP1-210ENST00000589823 IGHV4OR15-8A0A075B7B6 117 aa10.51□□□□□ -0.73
VMP1-210ENST00000589823 A0A087WW49 117 aa10.51□□□□□ -0.73
VMP1-210ENST00000589823 TRAV14DV4A0A0A6YYC5 116 aa10.51□□□□□ -0.73
VMP1-210ENST00000589823 OR2T8A6NH00 312 aa10.51□□□□□ -0.73
VMP1-210ENST00000589823 TRBV12-3P01733 135 aa10.51□□□□□ -0.73
VMP1-210ENST00000589823 FCGR2BP31994 310 aaPredicted RBP10.51□□□□□ -0.73
VMP1-210ENST00000589823 ARL3P36405 182 aa10.51□□□□□ -0.73
VMP1-210ENST00000589823 MYCNOSP40205 109 aa10.51□□□□□ -0.73
VMP1-210ENST00000589823 SPSB3Q6PJ21 355 aa10.51□□□□□ -0.73
VMP1-210ENST00000589823 TMEM252Q8N6L7 170 aa10.51□□□□□ -0.73
VMP1-210ENST00000589823 OR4X1Q8NH49 305 aa10.51□□□□□ -0.73
VMP1-210ENST00000589823 BSCL2Q96G97 398 aaPredicted RBP10.51□□□□□ -0.73
VMP1-210ENST00000589823 ACY3Q96HD9 319 aa10.51□□□□□ -0.73
VMP1-210ENST00000589823 RAX2Q96IS3 184 aa10.51□□□□□ -0.73
VMP1-210ENST00000589823 DUX3Q96PT4 197 aa10.51□□□□□ -0.73
VMP1-210ENST00000589823 STAB1Q9NY15 2570 aa10.51□□□□□ -0.73
VMP1-210ENST00000589823 A0A1B0GVG6 124 aa10.5□□□□□ -0.73
VMP1-210ENST00000589823 IGSF23A1L1A6 192 aa10.5□□□□□ -0.73
VMP1-210ENST00000589823 PMS2P5A8MQ11 134 aa10.5□□□□□ -0.73
VMP1-210ENST00000589823 PRSS46E5RG02 174 aa10.5□□□□□ -0.73
VMP1-210ENST00000589823 PPP5D1E7EU14 171 aa10.5□□□□□ -0.73
VMP1-210ENST00000589823 NUPL2O15504 423 aaKnown RBP10.5□□□□□ -0.73
VMP1-210ENST00000589823 GGCTO75223 188 aaKnown RBP10.5□□□□□ -0.73
VMP1-210ENST00000589823 CCNKO75909 580 aa10.5□□□□□ -0.73
VMP1-210ENST00000589823 CST7O76096 145 aa10.5□□□□□ -0.73
VMP1-210ENST00000589823 LYL1P12980 280 aa10.5□□□□□ -0.73
VMP1-210ENST00000589823 ZP3P21754 424 aa10.5□□□□□ -0.73
VMP1-210ENST00000589823 NUP62P37198 522 aaPredicted RBP10.5□□□□□ -0.73
VMP1-210ENST00000589823 SULT1A1P50225 295 aa10.5□□□□□ -0.73
VMP1-210ENST00000589823 RND2P52198 227 aa10.5□□□□□ -0.73
VMP1-210ENST00000589823 HBG1P69891 147 aa10.5□□□□□ -0.73
VMP1-210ENST00000589823 HBG2P69892 147 aa10.5□□□□□ -0.73
VMP1-210ENST00000589823 RPEL1Q2QD12 228 aa10.5□□□□□ -0.73
VMP1-210ENST00000589823 TMEM116Q8NCL8 245 aa10.5□□□□□ -0.73
VMP1-210ENST00000589823 NPIPB3Q92617 1050 aa10.5□□□□□ -0.73
VMP1-210ENST00000589823 ZC4H2Q9NQZ6 224 aa10.5□□□□□ -0.73
VMP1-210ENST00000589823 TRAV30A0A087WSZ9 112 aa10.49□□□□□ -0.73
VMP1-210ENST00000589823 SMCO3A2RU48 225 aa10.49□□□□□ -0.73
VMP1-210ENST00000589823 F8W735 103 aaPredicted RBP10.49□□□□□ -0.73
VMP1-210ENST00000589823 BMPR1BO00238 502 aa10.49□□□□□ -0.73
VMP1-210ENST00000589823 TGOLN2O43493 480 aa10.49□□□□□ -0.73
VMP1-210ENST00000589823 CLN5O75503 358 aa10.49□□□□□ -0.73
VMP1-210ENST00000589823 DLK1P80370 383 aa10.49□□□□□ -0.73
VMP1-210ENST00000589823 EWSR1Q01844 656 aaKnown RBP eCLIP10.49□□□□□ -0.73
VMP1-210ENST00000589823 SLC38A11Q08AI6 406 aa10.49□□□□□ -0.73
VMP1-210ENST00000589823 FHL3Q13643 280 aa10.49□□□□□ -0.73
VMP1-210ENST00000589823 GAMTQ14353 236 aa10.49□□□□□ -0.73
VMP1-210ENST00000589823 ACOT7LQ6ZUV0 252 aa10.49□□□□□ -0.73
VMP1-210ENST00000589823 LILRB2Q8N423 598 aa10.49□□□□□ -0.73
VMP1-210ENST00000589823 GGACTQ9BVM4 153 aa10.49□□□□□ -0.73
VMP1-210ENST00000589823 FXYD6-FXYD2A0A087WZ82 144 aa10.48□□□□□ -0.73
VMP1-210ENST00000589823 FNDC10F2Z333 226 aa10.48□□□□□ -0.73
VMP1-210ENST00000589823 TSPAN15O95858 294 aa10.48□□□□□ -0.73
VMP1-210ENST00000589823 RPL12P30050 165 aaKnown RBP10.48□□□□□ -0.73
VMP1-210ENST00000589823 HOXD3P31249 432 aaPredicted RBP10.48□□□□□ -0.73
VMP1-210ENST00000589823 S100A11P31949 105 aa10.48□□□□□ -0.73
VMP1-210ENST00000589823 AKR1C1Q04828 323 aa10.48□□□□□ -0.73
VMP1-210ENST00000589823 RELQ04864 619 aaPredicted RBP10.48□□□□□ -0.73
VMP1-210ENST00000589823 BAXQ07812 192 aa10.48□□□□□ -0.73
VMP1-210ENST00000589823 Q5BKY6 102 aa10.48□□□□□ -0.73
VMP1-210ENST00000589823 AKAP14Q86UN6 197 aa10.48□□□□□ -0.73
VMP1-210ENST00000589823 TMEM217Q8N7C4 229 aa10.48□□□□□ -0.73
VMP1-210ENST00000589823 MRPL36Q9P0J6 103 aaKnown RBP10.48□□□□□ -0.73
VMP1-210ENST00000589823 OR2C1O95371 312 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms