RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 RNASEH2CQ8TDP1 164 aaKnown RBP7□□□□□ -1.29
SMAD4-206ENST00000588860 ABHD5Q8WTS1 349 aa7□□□□□ -1.29
SMAD4-206ENST00000588860 NRGNQ92686 78 aa7□□□□□ -1.29
SMAD4-206ENST00000588860 MISP3Q96FF7 219 aa7□□□□□ -1.29
SMAD4-206ENST00000588860 ACY3Q96HD9 319 aa7□□□□□ -1.29
SMAD4-206ENST00000588860 EAF1Q96JC9 268 aaPredicted RBP7□□□□□ -1.29
SMAD4-206ENST00000588860 IGHV4-30-2A0A087WSY4 118 aa6.99□□□□□ -1.29
SMAD4-206ENST00000588860 TEX22C9J3V5 150 aa6.99□□□□□ -1.29
SMAD4-206ENST00000588860 M0R036 132 aa6.99□□□□□ -1.29
SMAD4-206ENST00000588860 DNASE2O00115 360 aaPredicted RBP6.99□□□□□ -1.29
SMAD4-206ENST00000588860 FCN1O00602 326 aa6.99□□□□□ -1.29
SMAD4-206ENST00000588860 NPFFO15130 113 aa6.99□□□□□ -1.29
SMAD4-206ENST00000588860 APELAP0DMC3 54 aa6.99□□□□□ -1.29
SMAD4-206ENST00000588860 TMEM11P17152 192 aa6.99□□□□□ -1.29
SMAD4-206ENST00000588860 RPL29P47914 159 aaKnown RBP6.99□□□□□ -1.29
SMAD4-206ENST00000588860 FBLN7Q53RD9 439 aa6.99□□□□□ -1.29
SMAD4-206ENST00000588860 RBMS3Q6XE24 437 aaKnown RBP6.99□□□□□ -1.29
SMAD4-206ENST00000588860 CYB561D1Q8N8Q1 229 aa6.99□□□□□ -1.29
SMAD4-206ENST00000588860 ZNF114Q8NC26 417 aa6.99□□□□□ -1.29
SMAD4-206ENST00000588860 NPBQ8NG41 125 aa6.99□□□□□ -1.29
SMAD4-206ENST00000588860 OR2T6Q8NHC8 308 aa6.99□□□□□ -1.29
SMAD4-206ENST00000588860 SRSF12Q8WXF0 261 aaKnown RBP6.99□□□□□ -1.29
SMAD4-206ENST00000588860 CACNG8Q8WXS5 425 aa6.99□□□□□ -1.29
SMAD4-206ENST00000588860 TMPRSS5Q9H3S3 457 aa6.99□□□□□ -1.29
SMAD4-206ENST00000588860 MANBALQ9NQG1 85 aa6.99□□□□□ -1.29
SMAD4-206ENST00000588860 VAX2Q9UIW0 290 aa6.99□□□□□ -1.29
SMAD4-206ENST00000588860 SLC45A2Q9UMX9 530 aa6.99□□□□□ -1.29
SMAD4-206ENST00000588860 POLR3KQ9Y2Y1 108 aaPredicted RBP6.99□□□□□ -1.29
SMAD4-206ENST00000588860 NUPL2O15504 423 aaKnown RBP6.98□□□□□ -1.29
SMAD4-206ENST00000588860 NDUFA3O95167 84 aa6.98□□□□□ -1.29
SMAD4-206ENST00000588860 IGHV3-48P01763 117 aa6.98□□□□□ -1.29
SMAD4-206ENST00000588860 LINC00869P0C866 280 aa6.98□□□□□ -1.29
SMAD4-206ENST00000588860 SAA4P35542 130 aa6.98□□□□□ -1.29
SMAD4-206ENST00000588860 PSMB3P49720 205 aa6.98□□□□□ -1.29
SMAD4-206ENST00000588860 MFAP2P55001 183 aa6.98□□□□□ -1.29
SMAD4-206ENST00000588860 DSCR9P59020 149 aa6.98□□□□□ -1.29
SMAD4-206ENST00000588860 RHOBP62745 196 aa6.98□□□□□ -1.29
SMAD4-206ENST00000588860 SSBP2P81877 361 aaPredicted RBP6.98□□□□□ -1.29
SMAD4-206ENST00000588860 C5orf64Q2M2E5 130 aa6.98□□□□□ -1.29
SMAD4-206ENST00000588860 ETFRF1Q6IPR1 90 aa6.98□□□□□ -1.29
SMAD4-206ENST00000588860 SPNS3Q6ZMD2 512 aa6.98□□□□□ -1.29
SMAD4-206ENST00000588860 C19orf35Q6ZS72 473 aa6.98□□□□□ -1.29
SMAD4-206ENST00000588860 CYP2G1PQ6ZSU1 146 aa6.98□□□□□ -1.29
SMAD4-206ENST00000588860 GATAD1Q8WUU5 269 aa6.98□□□□□ -1.29
SMAD4-206ENST00000588860 MALSU1Q96EH3 234 aa6.98□□□□□ -1.29
SMAD4-206ENST00000588860 FNDC4Q9H6D8 234 aaPredicted RBP6.98□□□□□ -1.29
SMAD4-206ENST00000588860 PUS1Q9Y606 427 aaKnown RBP eCLIP6.98□□□□□ -1.29
SMAD4-206ENST00000588860 F11RQ9Y624 299 aaKnown RBP6.98□□□□□ -1.29
SMAD4-206ENST00000588860 CR1P17927 2039 aa6.98□□□□□ -1.29
SMAD4-206ENST00000588860 AKAP9Q99996 3911 aa6.97□□□□□ -1.29
SMAD4-206ENST00000588860 IGKV1OR2-108A0A075B7D4 117 aa6.97□□□□□ -1.29
SMAD4-206ENST00000588860 IGHV3OR16-10A0A075B7F0 116 aa6.97□□□□□ -1.29
SMAD4-206ENST00000588860 NCBP2LA6PVI3 153 aaKnown RBP6.97□□□□□ -1.29
SMAD4-206ENST00000588860 FAM106CPP0CH98 169 aa6.97□□□□□ -1.29
SMAD4-206ENST00000588860 ARL14EPLP0DKL9 152 aa6.97□□□□□ -1.29
SMAD4-206ENST00000588860 PAX1P15863 534 aa6.97□□□□□ -1.29
SMAD4-206ENST00000588860 BRS3P32247 399 aa6.97□□□□□ -1.29
SMAD4-206ENST00000588860 TAGLN2P37802 199 aaKnown RBP6.97□□□□□ -1.29
SMAD4-206ENST00000588860 RND2P52198 227 aa6.97□□□□□ -1.29
SMAD4-206ENST00000588860 PAX8Q06710 450 aa6.97□□□□□ -1.29
SMAD4-206ENST00000588860 PMS2P11Q13670 270 aa6.97□□□□□ -1.29
SMAD4-206ENST00000588860 FXYD3Q14802 87 aa6.97□□□□□ -1.29
SMAD4-206ENST00000588860 AWAT1Q58HT5 328 aa6.97□□□□□ -1.29
SMAD4-206ENST00000588860 FAM120AOSQ5T036 256 aa6.97□□□□□ -1.29
SMAD4-206ENST00000588860 SPATA31B1PQ5VZV4 182 aa6.97□□□□□ -1.29
SMAD4-206ENST00000588860 PVRIGQ6DKI7 326 aa6.97□□□□□ -1.29
SMAD4-206ENST00000588860 TMEM88Q6PEY1 159 aa6.97□□□□□ -1.29
SMAD4-206ENST00000588860 SLC35E3Q7Z769 313 aa6.97□□□□□ -1.29
SMAD4-206ENST00000588860 CBLN2Q8IUK8 224 aa6.97□□□□□ -1.29
SMAD4-206ENST00000588860 Q8N6K4 173 aa6.97□□□□□ -1.29
SMAD4-206ENST00000588860 OR1P1Q8NH06 330 aa6.97□□□□□ -1.29
SMAD4-206ENST00000588860 C22orf15Q8WYQ4 148 aa6.97□□□□□ -1.29
SMAD4-206ENST00000588860 NPIPB3Q92617 1050 aa6.97□□□□□ -1.29
SMAD4-206ENST00000588860 AJUBAQ96IF1 538 aa6.97□□□□□ -1.29
SMAD4-206ENST00000588860 SRSF8Q9BRL6 282 aaKnown RBP6.97□□□□□ -1.29
SMAD4-206ENST00000588860 C20orf24Q9BUV8 137 aa6.97□□□□□ -1.29
SMAD4-206ENST00000588860 IGHV3-21A0A0B4J1V1 117 aa6.96□□□□□ -1.3
SMAD4-206ENST00000588860 CENPVL3A0A0U1RRI6 287 aa6.96□□□□□ -1.3
SMAD4-206ENST00000588860 CORTO00230 105 aa6.96□□□□□ -1.3
SMAD4-206ENST00000588860 TSPAN4O14817 238 aa6.96□□□□□ -1.3
SMAD4-206ENST00000588860 PAGE4O60829 102 aa6.96□□□□□ -1.3
SMAD4-206ENST00000588860 CXorf1O96002 111 aa6.96□□□□□ -1.3
SMAD4-206ENST00000588860 STAG3L2P0CL84 134 aa6.96□□□□□ -1.3
SMAD4-206ENST00000588860 STAG3L3P0CL85 134 aa6.96□□□□□ -1.3
SMAD4-206ENST00000588860 GATA2P23769 480 aaPredicted RBP6.96□□□□□ -1.3
SMAD4-206ENST00000588860 AKR1C3P42330 323 aa6.96□□□□□ -1.3
SMAD4-206ENST00000588860 MEF2BQ02080 365 aaPredicted RBP6.96□□□□□ -1.3
SMAD4-206ENST00000588860 EBI3Q14213 229 aa6.96□□□□□ -1.3
SMAD4-206ENST00000588860 CLEC12BQ2HXU8 276 aa6.96□□□□□ -1.3
SMAD4-206ENST00000588860 RUSC1-AS1Q66K80 236 aa6.96□□□□□ -1.3
SMAD4-206ENST00000588860 THAP8Q8NA92 274 aa6.96□□□□□ -1.3
SMAD4-206ENST00000588860 ARPC1AQ92747 370 aa6.96□□□□□ -1.3
SMAD4-206ENST00000588860 SLC25A33Q9BSK2 321 aa6.96□□□□□ -1.3
SMAD4-206ENST00000588860 RPS10P5Q9NQ39 176 aa6.96□□□□□ -1.3
SMAD4-206ENST00000588860 MRPL36Q9P0J6 103 aaKnown RBP6.96□□□□□ -1.3
SMAD4-206ENST00000588860 FUT9Q9Y231 359 aa6.96□□□□□ -1.3
SMAD4-206ENST00000588860 IGKV1D-37A0A075B6S9 117 aa6.95□□□□□ -1.3
SMAD4-206ENST00000588860 IGHV1-69DA0A0B4J2H0 117 aa6.95□□□□□ -1.3
SMAD4-206ENST00000588860 TCRBV4S1A1TA0A5B7 111 aa6.95□□□□□ -1.3
SMAD4-206ENST00000588860 C7orf77A4D0Y5 90 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms