RNA–Protein interactions for RNA: ENST00000588720.1

BCAS3-220, Transcript of BCAS3, microtubule associated cell migration factor, humanhuman

Gene BCAS3, Length 4,556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3-220ENST00000588720 HS3ST6Q96QI5 342 aa9.55□□□□□ -0.88
BCAS3-220ENST00000588720 AP5S1Q9NUS5 200 aa9.55□□□□□ -0.88
BCAS3-220ENST00000588720 C1QTNF9BB2RNN3 333 aa9.55□□□□□ -0.88
BCAS3-220ENST00000588720 RBFOX2O43251 390 aaKnown RBP eCLIP9.55□□□□□ -0.88
BCAS3-220ENST00000588720 ESDP10768 282 aa9.55□□□□□ -0.88
BCAS3-220ENST00000588720 SRIP30626 198 aa9.55□□□□□ -0.88
BCAS3-220ENST00000588720 CEACAM8P31997 349 aaPredicted RBP9.55□□□□□ -0.88
BCAS3-220ENST00000588720 NMUP48645 174 aa9.55□□□□□ -0.88
BCAS3-220ENST00000588720 PCSK4Q6UW60 755 aa9.55□□□□□ -0.88
BCAS3-220ENST00000588720 OR1B1Q8NGR6 318 aa9.55□□□□□ -0.88
BCAS3-220ENST00000588720 LPAR2Q9HBW0 351 aa9.55□□□□□ -0.88
BCAS3-220ENST00000588720 MMP23AO75900 390 aa9.55□□□□□ -0.88
BCAS3-220ENST00000588720 LYZP61626 148 aa9.55□□□□□ -0.88
BCAS3-220ENST00000588720 RPL11P62913 178 aaKnown RBP9.55□□□□□ -0.88
BCAS3-220ENST00000588720 RPRMLQ8N4K4 120 aa9.55□□□□□ -0.88
BCAS3-220ENST00000588720 CD177Q8N6Q3 437 aa9.55□□□□□ -0.88
BCAS3-220ENST00000588720 OR9G4Q8NGQ1 327 aa9.55□□□□□ -0.88
BCAS3-220ENST00000588720 RPRMQ9NS64 109 aa9.55□□□□□ -0.88
BCAS3-220ENST00000588720 GNG7O60262 68 aa9.55□□□□□ -0.88
BCAS3-220ENST00000588720 NDUFB4O95168 129 aa9.55□□□□□ -0.88
BCAS3-220ENST00000588720 GBGT1Q8N5D6 347 aa9.55□□□□□ -0.88
BCAS3-220ENST00000588720 ABCA4P78363 2273 aa9.54□□□□□ -0.88
BCAS3-220ENST00000588720 CEACAM4O75871 244 aa9.54□□□□□ -0.88
BCAS3-220ENST00000588720 AMBPP02760 352 aa9.54□□□□□ -0.88
BCAS3-220ENST00000588720 APELAP0DMC3 54 aa9.54□□□□□ -0.88
BCAS3-220ENST00000588720 SELENOTP62341 195 aa9.54□□□□□ -0.88
BCAS3-220ENST00000588720 DMRTA2Q96SC8 542 aa9.54□□□□□ -0.88
BCAS3-220ENST00000588720 HIST1H4GQ99525 98 aa9.54□□□□□ -0.88
BCAS3-220ENST00000588720 GTF3C1Q12789 2109 aa9.54□□□□□ -0.88
BCAS3-220ENST00000588720 CUL9Q8IWT3 2517 aa9.54□□□□□ -0.88
BCAS3-220ENST00000588720 OR4C46A6NHA9 309 aa9.54□□□□□ -0.88
BCAS3-220ENST00000588720 NPIPB11E5RHQ5 1161 aa9.54□□□□□ -0.88
BCAS3-220ENST00000588720 MAS1LP35410 378 aa9.54□□□□□ -0.88
BCAS3-220ENST00000588720 PAX2Q02962 417 aa9.54□□□□□ -0.88
BCAS3-220ENST00000588720 LY6DQ14210 128 aa9.54□□□□□ -0.88
BCAS3-220ENST00000588720 C3orf36Q3SXR2 165 aa9.54□□□□□ -0.88
BCAS3-220ENST00000588720 C10orf113Q5VZT2 155 aa9.54□□□□□ -0.88
BCAS3-220ENST00000588720 OR8A1Q8NGG7 326 aa9.54□□□□□ -0.88
BCAS3-220ENST00000588720 CCL3L1P16619 93 aa9.54□□□□□ -0.88
BCAS3-220ENST00000588720 DUTP33316 252 aaKnown RBP9.54□□□□□ -0.88
BCAS3-220ENST00000588720 CDKN1BP46527 198 aa9.54□□□□□ -0.88
BCAS3-220ENST00000588720 UQCRFS1P47985 274 aa9.54□□□□□ -0.88
BCAS3-220ENST00000588720 OR8I2Q8N0Y5 310 aa9.54□□□□□ -0.88
BCAS3-220ENST00000588720 TMUB1Q9BVT8 246 aa9.54□□□□□ -0.88
BCAS3-220ENST00000588720 CACNA1BQ00975 2339 aa9.54□□□□□ -0.88
BCAS3-220ENST00000588720 TRAV1-1A0A0B4J248 108 aa9.53□□□□□ -0.88
BCAS3-220ENST00000588720 LOC107984156A0A0G2JMH3 177 aa9.53□□□□□ -0.88
BCAS3-220ENST00000588720 ZFAND6Q6FIF0 208 aa9.53□□□□□ -0.88
BCAS3-220ENST00000588720 Q6ZSR3 168 aa9.53□□□□□ -0.88
BCAS3-220ENST00000588720 ARL17AQ8IVW1 177 aa9.53□□□□□ -0.88
BCAS3-220ENST00000588720 SSBP4Q9BWG4 385 aaPredicted RBP9.53□□□□□ -0.88
BCAS3-220ENST00000588720 LRP4O75096 1905 aa9.53□□□□□ -0.88
BCAS3-220ENST00000588720 SAA2-SAA4A0A096LPE2 208 aa9.53□□□□□ -0.88
BCAS3-220ENST00000588720 RAMP3O60896 148 aa9.53□□□□□ -0.88
BCAS3-220ENST00000588720 IGLV1-44P01699 117 aa9.53□□□□□ -0.88
BCAS3-220ENST00000588720 SAA2P0DJI9 122 aaPredicted RBP9.53□□□□□ -0.88
BCAS3-220ENST00000588720 EGR1P18146 543 aa9.53□□□□□ -0.88
BCAS3-220ENST00000588720 LRRC75BQ2VPJ9 315 aa9.53□□□□□ -0.88
BCAS3-220ENST00000588720 LYPD6Q86Y78 171 aa9.53□□□□□ -0.88
BCAS3-220ENST00000588720 METRNQ9UJH8 293 aa9.53□□□□□ -0.88
BCAS3-220ENST00000588720 FAM215AQ9Y5M1 114 aa9.53□□□□□ -0.88
BCAS3-220ENST00000588720 INTS1Q8N201 2190 aaKnown RBP9.53□□□□□ -0.88
BCAS3-220ENST00000588720 WIPF3A6NGB9 483 aa9.53□□□□□ -0.88
BCAS3-220ENST00000588720 RELBQ01201 579 aa9.53□□□□□ -0.88
BCAS3-220ENST00000588720 MIC13Q5XKP0 118 aa9.53□□□□□ -0.88
BCAS3-220ENST00000588720 C20orf204Q6ZNR8 217 aa9.53□□□□□ -0.88
BCAS3-220ENST00000588720 C5orf24Q7Z6I8 188 aa9.53□□□□□ -0.88
BCAS3-220ENST00000588720 ST6GALNAC3Q8NDV1 305 aa9.53□□□□□ -0.88
BCAS3-220ENST00000588720 COQ2Q96H96 371 aa9.53□□□□□ -0.88
BCAS3-220ENST00000588720 ZGRF1Q86YA3 2104 aa9.53□□□□□ -0.88
BCAS3-220ENST00000588720 HSD52Q0P140 79 aa9.53□□□□□ -0.88
BCAS3-220ENST00000588720 SELLP14151 372 aa9.52□□□□□ -0.88
BCAS3-220ENST00000588720 NMSQ5H8A3 153 aa9.52□□□□□ -0.88
BCAS3-220ENST00000588720 NRN1Q9NPD7 142 aa9.52□□□□□ -0.88
BCAS3-220ENST00000588720 MBNL3Q9NUK0 354 aaKnown RBP9.52□□□□□ -0.88
BCAS3-220ENST00000588720 CD5LO43866 347 aa9.52□□□□□ -0.89
BCAS3-220ENST00000588720 CA1P00915 261 aaPredicted RBP9.52□□□□□ -0.89
BCAS3-220ENST00000588720 HCP5Q6MZN7 132 aa9.52□□□□□ -0.89
BCAS3-220ENST00000588720 CLDND2Q8NHS1 167 aa9.52□□□□□ -0.89
BCAS3-220ENST00000588720 RPUSD1Q9UJJ7 312 aaKnown RBP9.52□□□□□ -0.89
BCAS3-220ENST00000588720 HTTP42858 3142 aa9.52□□□□□ -0.89
BCAS3-220ENST00000588720 NCOA6Q14686 2063 aaPredicted RBP9.52□□□□□ -0.89
BCAS3-220ENST00000588720 PCNX3Q9H6A9 2034 aa9.52□□□□□ -0.89
BCAS3-220ENST00000588720 CSN3P07498 182 aa9.52□□□□□ -0.89
BCAS3-220ENST00000588720 FAM106CPP0CH98 169 aa9.52□□□□□ -0.89
BCAS3-220ENST00000588720 LMO1P25800 156 aa9.52□□□□□ -0.89
BCAS3-220ENST00000588720 SMAGPQ0VAQ4 97 aa9.52□□□□□ -0.89
BCAS3-220ENST00000588720 SSC4DQ8WTU2 575 aa9.52□□□□□ -0.89
BCAS3-220ENST00000588720 RCC1LQ96I51 464 aaKnown RBP9.52□□□□□ -0.89
BCAS3-220ENST00000588720 IGKV1D-17A0A075B6S4 117 aa9.51□□□□□ -0.89
BCAS3-220ENST00000588720 ADIPOQQ15848 244 aa9.51□□□□□ -0.89
BCAS3-220ENST00000588720 KRTAP27-1Q3LI81 207 aa9.51□□□□□ -0.89
BCAS3-220ENST00000588720 TCF24Q7RTU0 167 aa9.51□□□□□ -0.89
BCAS3-220ENST00000588720 ZNF525Q8N782 197 aa9.51□□□□□ -0.89
BCAS3-220ENST00000588720 SLC25A2Q9BXI2 301 aa9.51□□□□□ -0.89
BCAS3-220ENST00000588720 SNRPCP09234 159 aaKnown RBP9.51□□□□□ -0.89
BCAS3-220ENST00000588720 GAGE2BQ13066 116 aa9.51□□□□□ -0.89
BCAS3-220ENST00000588720 GAGE2EQ4V326 116 aa9.51□□□□□ -0.89
BCAS3-220ENST00000588720 GNB1LQ9BYB4 327 aa9.51□□□□□ -0.89
BCAS3-220ENST00000588720 MRPL20Q9BYC9 149 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms