RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 A0A1B0GX30 115 aa11.43□□□□□ -0.58
NEDD4L-223ENST00000588516 IGHV3-7P01780 117 aa11.43□□□□□ -0.58
NEDD4L-223ENST00000588516 OR4A8P0C604 315 aa11.43□□□□□ -0.58
NEDD4L-223ENST00000588516 SAA1P0DJI8 122 aaPredicted RBP11.43□□□□□ -0.58
NEDD4L-223ENST00000588516 BMP5P22003 454 aa11.43□□□□□ -0.58
NEDD4L-223ENST00000588516 OR10J1P30954 320 aa11.43□□□□□ -0.58
NEDD4L-223ENST00000588516 COMPP49747 757 aaPredicted RBP11.43□□□□□ -0.58
NEDD4L-223ENST00000588516 ERVFC1-1P60608 527 aa11.43□□□□□ -0.58
NEDD4L-223ENST00000588516 RBPJQ06330 500 aa11.43□□□□□ -0.58
NEDD4L-223ENST00000588516 OR10X1Q8NGY0 326 aa11.43□□□□□ -0.58
NEDD4L-223ENST00000588516 C1orf159Q96HA4 380 aa11.43□□□□□ -0.58
NEDD4L-223ENST00000588516 GNB1LQ9BYB4 327 aa11.43□□□□□ -0.58
NEDD4L-223ENST00000588516 SAP30LQ9HAJ7 183 aa11.43□□□□□ -0.58
NEDD4L-223ENST00000588516 DNAJC4Q9NNZ3 241 aa11.43□□□□□ -0.58
NEDD4L-223ENST00000588516 WASHC3Q9Y3C0 194 aa11.43□□□□□ -0.58
NEDD4L-223ENST00000588516 SPG11Q96JI7 2443 aa11.43□□□□□ -0.58
NEDD4L-223ENST00000588516 ABCA2Q9BZC7 2435 aa11.43□□□□□ -0.58
NEDD4L-223ENST00000588516 DYSFO75923 2080 aa11.42□□□□□ -0.58
NEDD4L-223ENST00000588516 TRBV23-1A0A0A0MS06 115 aa11.42□□□□□ -0.58
NEDD4L-223ENST00000588516 H0YJW9 148 aa11.42□□□□□ -0.58
NEDD4L-223ENST00000588516 TMEM178BH3BS89 294 aa11.42□□□□□ -0.58
NEDD4L-223ENST00000588516 ISLRO14498 428 aa11.42□□□□□ -0.58
NEDD4L-223ENST00000588516 OR7C2O60412 319 aa11.42□□□□□ -0.58
NEDD4L-223ENST00000588516 ADIPOQQ15848 244 aa11.42□□□□□ -0.58
NEDD4L-223ENST00000588516 SPRNQ5BIV9 151 aa11.42□□□□□ -0.58
NEDD4L-223ENST00000588516 C9orf152Q5JTZ5 239 aa11.42□□□□□ -0.58
NEDD4L-223ENST00000588516 C1orf229Q6ZS94 237 aaPredicted RBP11.42□□□□□ -0.58
NEDD4L-223ENST00000588516 TCF23Q7RTU1 214 aa11.42□□□□□ -0.58
NEDD4L-223ENST00000588516 SLC25A33Q9BSK2 321 aa11.42□□□□□ -0.58
NEDD4L-223ENST00000588516 DERL1Q9BUN8 251 aa11.42□□□□□ -0.58
NEDD4L-223ENST00000588516 ZNF430Q9H8G1 570 aaPredicted RBP11.42□□□□□ -0.58
NEDD4L-223ENST00000588516 KAAG1Q9UBP8 84 aa11.42□□□□□ -0.58
NEDD4L-223ENST00000588516 PDZD2O15018 2839 aa11.42□□□□□ -0.58
NEDD4L-223ENST00000588516 TET2Q6N021 2002 aaPredicted RBP11.42□□□□□ -0.58
NEDD4L-223ENST00000588516 POLEQ07864 2286 aa11.42□□□□□ -0.58
NEDD4L-223ENST00000588516 CORTO00230 105 aa11.41□□□□□ -0.58
NEDD4L-223ENST00000588516 ESDP10768 282 aa11.41□□□□□ -0.58
NEDD4L-223ENST00000588516 SELLP14151 372 aa11.41□□□□□ -0.58
NEDD4L-223ENST00000588516 PAX1P15863 534 aa11.41□□□□□ -0.58
NEDD4L-223ENST00000588516 ZNF137PP52743 207 aa11.41□□□□□ -0.58
NEDD4L-223ENST00000588516 LGALS4P56470 323 aa11.41□□□□□ -0.58
NEDD4L-223ENST00000588516 SSTP61278 116 aa11.41□□□□□ -0.58
NEDD4L-223ENST00000588516 Q0VG73 95 aa11.41□□□□□ -0.58
NEDD4L-223ENST00000588516 CLEC12BQ2HXU8 276 aa11.41□□□□□ -0.58
NEDD4L-223ENST00000588516 FAM201AQ5SY85 155 aa11.41□□□□□ -0.58
NEDD4L-223ENST00000588516 RASL11AQ6T310 242 aa11.41□□□□□ -0.58
NEDD4L-223ENST00000588516 MIR17HGQ75NE6 70 aa11.41□□□□□ -0.58
NEDD4L-223ENST00000588516 WFDC8Q8IUA0 241 aa11.41□□□□□ -0.58
NEDD4L-223ENST00000588516 OR9G1Q8NH87 305 aa11.41□□□□□ -0.58
NEDD4L-223ENST00000588516 JKAMPQ9P055 326 aa11.41□□□□□ -0.58
NEDD4L-223ENST00000588516 DSCAMO60469 2012 aa11.41□□□□□ -0.58
NEDD4L-223ENST00000588516 ZNF705GA8MUZ8 300 aaPredicted RBP11.4□□□□□ -0.58
NEDD4L-223ENST00000588516 COX7A2P2O60397 106 aa11.4□□□□□ -0.58
NEDD4L-223ENST00000588516 DEFA4P12838 97 aa11.4□□□□□ -0.58
NEDD4L-223ENST00000588516 CRISP2P16562 243 aa11.4□□□□□ -0.58
NEDD4L-223ENST00000588516 PPOXP50336 477 aa11.4□□□□□ -0.58
NEDD4L-223ENST00000588516 PRRX1P54821 245 aa11.4□□□□□ -0.58
NEDD4L-223ENST00000588516 DOLPP1Q86YN1 238 aa11.4□□□□□ -0.58
NEDD4L-223ENST00000588516 MMD2Q8IY49 270 aa11.4□□□□□ -0.58
NEDD4L-223ENST00000588516 OR1L6Q8NGR2 347 aa11.4□□□□□ -0.58
NEDD4L-223ENST00000588516 CMTM2Q8TAZ6 248 aa11.4□□□□□ -0.58
NEDD4L-223ENST00000588516 SMIM12Q96EX1 92 aa11.4□□□□□ -0.58
NEDD4L-223ENST00000588516 MRPL20Q9BYC9 149 aaKnown RBP11.4□□□□□ -0.58
NEDD4L-223ENST00000588516 TMEM106BQ9NUM4 274 aa11.4□□□□□ -0.58
NEDD4L-223ENST00000588516 CSMD2Q7Z408 3487 aa11.4□□□□□ -0.58
NEDD4L-223ENST00000588516 RAI1Q7Z5J4 1906 aaPredicted RBP11.4□□□□□ -0.59
NEDD4L-223ENST00000588516 TRBV20OR9-2A0A075B6H5 130 aa11.39□□□□□ -0.59
NEDD4L-223ENST00000588516 A0A0G2JNJ9 132 aa11.39□□□□□ -0.59
NEDD4L-223ENST00000588516 DPRXA6NFQ7 191 aa11.39□□□□□ -0.59
NEDD4L-223ENST00000588516 ACTL6BO94805 426 aa11.39□□□□□ -0.59
NEDD4L-223ENST00000588516 FSTL3O95633 263 aa11.39□□□□□ -0.59
NEDD4L-223ENST00000588516 CCL8P80075 99 aa11.39□□□□□ -0.59
NEDD4L-223ENST00000588516 CENPWQ5EE01 88 aa11.39□□□□□ -0.59
NEDD4L-223ENST00000588516 C10orf113Q5VZT2 155 aa11.39□□□□□ -0.59
NEDD4L-223ENST00000588516 SPATA31B1PQ5VZV4 182 aa11.39□□□□□ -0.59
NEDD4L-223ENST00000588516 TMEM200BQ69YZ2 307 aa11.39□□□□□ -0.59
NEDD4L-223ENST00000588516 MRPL52Q86TS9 123 aaKnown RBP11.39□□□□□ -0.59
NEDD4L-223ENST00000588516 TGIF2LXQ8IUE1 241 aa11.39□□□□□ -0.59
NEDD4L-223ENST00000588516 TEX45Q8NA69 505 aa11.39□□□□□ -0.59
NEDD4L-223ENST00000588516 THAP8Q8NA92 274 aa11.39□□□□□ -0.59
NEDD4L-223ENST00000588516 ZNF114Q8NC26 417 aa11.39□□□□□ -0.59
NEDD4L-223ENST00000588516 MS4A10Q96PG2 267 aa11.39□□□□□ -0.59
NEDD4L-223ENST00000588516 MRPL18Q9H0U6 180 aaKnown RBP11.39□□□□□ -0.59
NEDD4L-223ENST00000588516 DYNLRB1Q9NP97 96 aa11.39□□□□□ -0.59
NEDD4L-223ENST00000588516 Q9UFV3 132 aa11.39□□□□□ -0.59
NEDD4L-223ENST00000588516 PKDREJQ9NTG1 2253 aa11.39□□□□□ -0.59
NEDD4L-223ENST00000588516 TCRBV4S1A1TA0A5B7 111 aa11.38□□□□□ -0.59
NEDD4L-223ENST00000588516 SRRM4A7MD48 611 aaKnown RBP11.38□□□□□ -0.59
NEDD4L-223ENST00000588516 FCN1O00602 326 aa11.38□□□□□ -0.59
NEDD4L-223ENST00000588516 FOXH1O75593 365 aa11.38□□□□□ -0.59
NEDD4L-223ENST00000588516 SCGB1D1O95968 90 aa11.38□□□□□ -0.59
NEDD4L-223ENST00000588516 HLA-DQA1P01909 254 aa11.38□□□□□ -0.59
NEDD4L-223ENST00000588516 IGKV1-16P04430 117 aa11.38□□□□□ -0.59
NEDD4L-223ENST00000588516 CRYBB3P26998 211 aa11.38□□□□□ -0.59
NEDD4L-223ENST00000588516 RAB4BP61018 213 aa11.38□□□□□ -0.59
NEDD4L-223ENST00000588516 GFRALQ6UXV0 394 aa11.38□□□□□ -0.59
NEDD4L-223ENST00000588516 RPRMLQ8N4K4 120 aa11.38□□□□□ -0.59
NEDD4L-223ENST00000588516 H1FXQ92522 213 aaKnown RBP11.38□□□□□ -0.59
NEDD4L-223ENST00000588516 C14orf144Q96I85 54 aa11.38□□□□□ -0.59
NEDD4L-223ENST00000588516 NDUFAF3Q9BU61 184 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms