RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 ODF3BA8MYP8 253 aa6.19□□□□□ -1.42
VMP1-204ENST00000587259 CORTO00230 105 aa6.19□□□□□ -1.42
VMP1-204ENST00000587259 CD1BP29016 333 aa6.19□□□□□ -1.42
VMP1-204ENST00000587259 HOXD3P31249 432 aaPredicted RBP6.19□□□□□ -1.42
VMP1-204ENST00000587259 VDAC2P45880 294 aaPredicted RBP6.19□□□□□ -1.42
VMP1-204ENST00000587259 LGALS4P56470 323 aa6.19□□□□□ -1.42
VMP1-204ENST00000587259 BLCAPP62952 87 aa6.19□□□□□ -1.42
VMP1-204ENST00000587259 ZNF616Q08AN1 781 aa6.19□□□□□ -1.42
VMP1-204ENST00000587259 PJVKQ0ZLH3 352 aa6.19□□□□□ -1.42
VMP1-204ENST00000587259 RAB31Q13636 194 aa6.19□□□□□ -1.42
VMP1-204ENST00000587259 TOR2AQ5JU69 321 aa6.19□□□□□ -1.42
VMP1-204ENST00000587259 TPTE2P1Q5T6R2 138 aa6.19□□□□□ -1.42
VMP1-204ENST00000587259 OR8G2PQ6IF36 304 aa6.19□□□□□ -1.42
VMP1-204ENST00000587259 C10orf99Q6UWK7 81 aa6.19□□□□□ -1.42
VMP1-204ENST00000587259 CENPVQ7Z7K6 275 aaPredicted RBP6.19□□□□□ -1.42
VMP1-204ENST00000587259 OR4P4Q8NGL7 312 aa6.19□□□□□ -1.42
VMP1-204ENST00000587259 LYPD6BQ8NI32 183 aa6.19□□□□□ -1.42
VMP1-204ENST00000587259 RBMXL1Q96E39 390 aaKnown RBP6.19□□□□□ -1.42
VMP1-204ENST00000587259 WFDC1Q9HC57 220 aa6.19□□□□□ -1.42
VMP1-204ENST00000587259 C15orf62A8K5M9 175 aa6.18□□□□□ -1.42
VMP1-204ENST00000587259 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.18□□□□□ -1.42
VMP1-204ENST00000587259 IFNA4P05014 189 aa6.18□□□□□ -1.42
VMP1-204ENST00000587259 TAGLN2P37802 199 aaKnown RBP6.18□□□□□ -1.42
VMP1-204ENST00000587259 SNCAP37840 140 aa6.18□□□□□ -1.42
VMP1-204ENST00000587259 REG1BP48304 166 aa6.18□□□□□ -1.42
VMP1-204ENST00000587259 LINC00205P59089 165 aa6.18□□□□□ -1.42
VMP1-204ENST00000587259 C2orf83Q53S99 150 aa6.18□□□□□ -1.42
VMP1-204ENST00000587259 TCTEX1D4Q5JR98 221 aa6.18□□□□□ -1.42
VMP1-204ENST00000587259 ETV3LQ6ZN32 361 aa6.18□□□□□ -1.42
VMP1-204ENST00000587259 TMEM182Q6ZP80 229 aaPredicted RBP6.18□□□□□ -1.42
VMP1-204ENST00000587259 MOB3BQ86TA1 216 aa6.18□□□□□ -1.42
VMP1-204ENST00000587259 CCDC28AQ8IWP9 274 aa6.18□□□□□ -1.42
VMP1-204ENST00000587259 VKORC1L1Q8N0U8 176 aa6.18□□□□□ -1.42
VMP1-204ENST00000587259 WIPF2Q8TF74 440 aaPredicted RBP6.18□□□□□ -1.42
VMP1-204ENST00000587259 OR4C12Q96R67 309 aa6.18□□□□□ -1.42
VMP1-204ENST00000587259 NPFFR1Q9GZQ6 430 aa6.18□□□□□ -1.42
VMP1-204ENST00000587259 MEGF9Q9H1U4 602 aa6.18□□□□□ -1.42
VMP1-204ENST00000587259 KIAA1456Q9P272 454 aa6.18□□□□□ -1.42
VMP1-204ENST00000587259 A0A1W2PPI3 338 aa6.17□□□□□ -1.42
VMP1-204ENST00000587259 SH2D7A6NKC9 451 aaPredicted RBP6.17□□□□□ -1.42
VMP1-204ENST00000587259 PMS2P5A8MQ11 134 aa6.17□□□□□ -1.42
VMP1-204ENST00000587259 LY6LH3BQJ8 138 aa6.17□□□□□ -1.42
VMP1-204ENST00000587259 CYB5BO43169 146 aa6.17□□□□□ -1.42
VMP1-204ENST00000587259 FGF7P21781 194 aa6.17□□□□□ -1.42
VMP1-204ENST00000587259 BRS3P32247 399 aa6.17□□□□□ -1.42
VMP1-204ENST00000587259 PEA15Q15121 130 aa6.17□□□□□ -1.42
VMP1-204ENST00000587259 SSX2Q16385 188 aa6.17□□□□□ -1.42
VMP1-204ENST00000587259 TMEM41BQ5BJD5 291 aa6.17□□□□□ -1.42
VMP1-204ENST00000587259 UTF1Q5T230 341 aa6.17□□□□□ -1.42
VMP1-204ENST00000587259 ETFRF1Q6IPR1 90 aa6.17□□□□□ -1.42
VMP1-204ENST00000587259 HAPLN4Q86UW8 402 aa6.17□□□□□ -1.42
VMP1-204ENST00000587259 NDUFA11Q86Y39 141 aa6.17□□□□□ -1.42
VMP1-204ENST00000587259 THNSL2Q86YJ6 484 aa6.17□□□□□ -1.42
VMP1-204ENST00000587259 ZNF114Q8NC26 417 aa6.17□□□□□ -1.42
VMP1-204ENST00000587259 OR1L6Q8NGR2 347 aa6.17□□□□□ -1.42
VMP1-204ENST00000587259 OR2T10Q8NGZ9 312 aa6.17□□□□□ -1.42
VMP1-204ENST00000587259 FAM213BQ8TBF2 198 aa6.17□□□□□ -1.42
VMP1-204ENST00000587259 RNASEH2CQ8TDP1 164 aaKnown RBP6.17□□□□□ -1.42
VMP1-204ENST00000587259 PCNPQ8WW12 178 aaKnown RBP6.17□□□□□ -1.42
VMP1-204ENST00000587259 CACNG8Q8WXS5 425 aa6.17□□□□□ -1.42
VMP1-204ENST00000587259 MALSU1Q96EH3 234 aa6.17□□□□□ -1.42
VMP1-204ENST00000587259 BSCL2Q96G97 398 aaPredicted RBP6.17□□□□□ -1.42
VMP1-204ENST00000587259 SH3BGRL3Q9H299 93 aa6.17□□□□□ -1.42
VMP1-204ENST00000587259 HRH4Q9H3N8 390 aa6.17□□□□□ -1.42
VMP1-204ENST00000587259 NPVFQ9HCQ7 196 aa6.17□□□□□ -1.42
VMP1-204ENST00000587259 NDUFA4L2Q9NRX3 87 aa6.17□□□□□ -1.42
VMP1-204ENST00000587259 TRAV1-1A0A0B4J248 108 aa6.16□□□□□ -1.42
VMP1-204ENST00000587259 TEX50A0A1B0GTY4 177 aa6.16□□□□□ -1.42
VMP1-204ENST00000587259 A0A1B0GW64 132 aa6.16□□□□□ -1.42
VMP1-204ENST00000587259 A6NDX4 124 aa6.16□□□□□ -1.42
VMP1-204ENST00000587259 SLC25A17O43808 307 aa6.16□□□□□ -1.42
VMP1-204ENST00000587259 MOSP00540 346 aa6.16□□□□□ -1.42
VMP1-204ENST00000587259 IFNA1P01562 189 aa6.16□□□□□ -1.42
VMP1-204ENST00000587259 IGLV2-23P01705 113 aa6.16□□□□□ -1.42
VMP1-204ENST00000587259 SNRNP70P08621 437 aaKnown RBP6.16□□□□□ -1.42
VMP1-204ENST00000587259 H2AFB1P0C5Y9 115 aa6.16□□□□□ -1.42
VMP1-204ENST00000587259 CD24P25063 80 aa6.16□□□□□ -1.42
VMP1-204ENST00000587259 GPX4P36969 197 aaPredicted RBP6.16□□□□□ -1.42
VMP1-204ENST00000587259 PPT1P50897 306 aa6.16□□□□□ -1.42
VMP1-204ENST00000587259 PLGLAQ15195 96 aa6.16□□□□□ -1.42
VMP1-204ENST00000587259 PRSS8Q16651 343 aa6.16□□□□□ -1.42
VMP1-204ENST00000587259 BSXQ3C1V8 233 aa6.16□□□□□ -1.42
VMP1-204ENST00000587259 ACOT6Q3I5F7 207 aaPredicted RBP6.16□□□□□ -1.42
VMP1-204ENST00000587259 TEPPQ6URK8 271 aa6.16□□□□□ -1.42
VMP1-204ENST00000587259 BTNL8Q6UX41 500 aa6.16□□□□□ -1.42
VMP1-204ENST00000587259 PPP1R27Q86WC6 154 aa6.16□□□□□ -1.42
VMP1-204ENST00000587259 Q8N2B8 174 aa6.16□□□□□ -1.42
VMP1-204ENST00000587259 OR4F17Q8NGA8 305 aa6.16□□□□□ -1.42
VMP1-204ENST00000587259 NARS2Q96I59 477 aaKnown RBP6.16□□□□□ -1.42
VMP1-204ENST00000587259 OR4F4Q96R69 305 aa6.16□□□□□ -1.42
VMP1-204ENST00000587259 HINT2Q9BX68 163 aa6.16□□□□□ -1.42
VMP1-204ENST00000587259 NPCDR1Q9BY65 106 aa6.16□□□□□ -1.42
VMP1-204ENST00000587259 KRTAP9-2Q9BYQ4 174 aa6.16□□□□□ -1.42
VMP1-204ENST00000587259 WNT10AQ9GZT5 417 aa6.16□□□□□ -1.42
VMP1-204ENST00000587259 ZNF430Q9H8G1 570 aaPredicted RBP6.16□□□□□ -1.42
VMP1-204ENST00000587259 GAR1Q9NY12 217 aaKnown RBP6.16□□□□□ -1.42
VMP1-204ENST00000587259 WDR83OSQ9Y284 106 aa6.16□□□□□ -1.42
VMP1-204ENST00000587259 HILPDAQ9Y5L2 63 aa6.16□□□□□ -1.42
VMP1-204ENST00000587259 TRAV3A0A0B4J244 114 aa6.15□□□□□ -1.42
VMP1-204ENST00000587259 SMCO3A2RU48 225 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms