RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 SUB1P53999 127 aaKnown RBP eCLIP14.09□□□□□ -0.15
TRAF4-216ENST00000586813 RNASE12Q5GAN4 147 aaKnown RBP14.09□□□□□ -0.15
TRAF4-216ENST00000586813 RNASE10Q5GAN6 216 aaKnown RBP14.09□□□□□ -0.15
TRAF4-216ENST00000586813 METTL26Q96S19 204 aa14.09□□□□□ -0.15
TRAF4-216ENST00000586813 FNDC4Q9H6D8 234 aaPredicted RBP14.09□□□□□ -0.15
TRAF4-216ENST00000586813 C3orf85A0A1B0GTC6 90 aa14.08□□□□□ -0.16
TRAF4-216ENST00000586813 A0A1W2PS18 150 aa14.08□□□□□ -0.16
TRAF4-216ENST00000586813 K7EQG2 157 aa14.08□□□□□ -0.16
TRAF4-216ENST00000586813 CLN5O75503 358 aa14.08□□□□□ -0.16
TRAF4-216ENST00000586813 ATG12O94817 140 aa14.08□□□□□ -0.16
TRAF4-216ENST00000586813 GIG44P09565 113 aaPredicted RBP14.08□□□□□ -0.16
TRAF4-216ENST00000586813 OPRK1P41145 380 aa14.08□□□□□ -0.16
TRAF4-216ENST00000586813 ETV6P41212 452 aa14.08□□□□□ -0.16
TRAF4-216ENST00000586813 VBP1P61758 197 aa14.08□□□□□ -0.16
TRAF4-216ENST00000586813 TRPT1Q86TN4 253 aaKnown RBP14.08□□□□□ -0.16
TRAF4-216ENST00000586813 ARRDC1Q8N5I2 433 aa14.08□□□□□ -0.16
TRAF4-216ENST00000586813 STXBP6Q8NFX7 210 aa14.08□□□□□ -0.16
TRAF4-216ENST00000586813 FUNDC2Q9BWH2 189 aa14.08□□□□□ -0.16
TRAF4-216ENST00000586813 HRH4Q9H3N8 390 aa14.08□□□□□ -0.16
TRAF4-216ENST00000586813 KLK11Q9UBX7 282 aa14.08□□□□□ -0.16
TRAF4-216ENST00000586813 TNFAIP8O95379 198 aa14.07□□□□□ -0.16
TRAF4-216ENST00000586813 CRYBB3P26998 211 aa14.07□□□□□ -0.16
TRAF4-216ENST00000586813 P2RY1P47900 373 aa14.07□□□□□ -0.16
TRAF4-216ENST00000586813 PPP5CP53041 499 aa14.07□□□□□ -0.16
TRAF4-216ENST00000586813 TRIM16LQ309B1 348 aa14.07□□□□□ -0.16
TRAF4-216ENST00000586813 TMEM41BQ5BJD5 291 aa14.07□□□□□ -0.16
TRAF4-216ENST00000586813 OR4X1Q8NH49 305 aa14.07□□□□□ -0.16
TRAF4-216ENST00000586813 GRAMD2BQ96HH9 432 aa14.07□□□□□ -0.16
TRAF4-216ENST00000586813 IGHV4-28A0A0C4DH34 117 aa14.06□□□□□ -0.16
TRAF4-216ENST00000586813 IGLL5B9A064 214 aa14.06□□□□□ -0.16
TRAF4-216ENST00000586813 C11orf94C9JXX5 98 aa14.06□□□□□ -0.16
TRAF4-216ENST00000586813 SCGB2A1O75556 95 aa14.06□□□□□ -0.16
TRAF4-216ENST00000586813 CD3DP04234 171 aa14.06□□□□□ -0.16
TRAF4-216ENST00000586813 ZNF688P0C7X2 276 aa14.06□□□□□ -0.16
TRAF4-216ENST00000586813 SPP1P10451 314 aa14.06□□□□□ -0.16
TRAF4-216ENST00000586813 C4BPBP20851 252 aa14.06□□□□□ -0.16
TRAF4-216ENST00000586813 BSXQ3C1V8 233 aa14.06□□□□□ -0.16
TRAF4-216ENST00000586813 SP6Q3SY56 376 aa14.06□□□□□ -0.16
TRAF4-216ENST00000586813 ENY2Q9NPA8 101 aa14.06□□□□□ -0.16
TRAF4-216ENST00000586813 COPZ2Q9P299 210 aa14.06□□□□□ -0.16
TRAF4-216ENST00000586813 APLNQ9ULZ1 77 aa14.06□□□□□ -0.16
TRAF4-216ENST00000586813 A0A0G2JRQ6 117 aa14.05□□□□□ -0.16
TRAF4-216ENST00000586813 FAM25AB3EWG3 89 aa14.05□□□□□ -0.16
TRAF4-216ENST00000586813 FAM25CB3EWG5 89 aa14.05□□□□□ -0.16
TRAF4-216ENST00000586813 FAM25GB3EWG6 89 aa14.05□□□□□ -0.16
TRAF4-216ENST00000586813 IGKV1-17P01599 117 aa14.05□□□□□ -0.16
TRAF4-216ENST00000586813 RBMY1A1P0DJD3 496 aaKnown RBP14.05□□□□□ -0.16
TRAF4-216ENST00000586813 RBMY1CP0DJD4 496 aa14.05□□□□□ -0.16
TRAF4-216ENST00000586813 TBPP20226 339 aa14.05□□□□□ -0.16
TRAF4-216ENST00000586813 UCP1P25874 307 aa14.05□□□□□ -0.16
TRAF4-216ENST00000586813 RPL5P46777 297 aaKnown RBP14.05□□□□□ -0.16
TRAF4-216ENST00000586813 RBMY1FQ15415 496 aaKnown RBP14.05□□□□□ -0.16
TRAF4-216ENST00000586813 MLANAQ16655 118 aa14.05□□□□□ -0.16
TRAF4-216ENST00000586813 MORN3Q6PF18 240 aaPredicted RBP14.05□□□□□ -0.16
TRAF4-216ENST00000586813 CCDC71LQ8N9Z2 235 aa14.05□□□□□ -0.16
TRAF4-216ENST00000586813 OR52I2Q8NH67 350 aa14.05□□□□□ -0.16
TRAF4-216ENST00000586813 DCANP1Q8TF63 244 aa14.05□□□□□ -0.16
TRAF4-216ENST00000586813 TMEM230Q96A57 120 aa14.05□□□□□ -0.16
TRAF4-216ENST00000586813 RRNAD1Q96FB5 475 aaKnown RBP14.05□□□□□ -0.16
TRAF4-216ENST00000586813 NARS2Q96I59 477 aaKnown RBP14.05□□□□□ -0.16
TRAF4-216ENST00000586813 KNCNA6PVL3 124 aa14.04□□□□□ -0.16
TRAF4-216ENST00000586813 ZNF705EA8MWA4 302 aaPredicted RBP14.04□□□□□ -0.16
TRAF4-216ENST00000586813 MIFP14174 115 aa14.04□□□□□ -0.16
TRAF4-216ENST00000586813 RORCP51449 518 aa14.04□□□□□ -0.16
TRAF4-216ENST00000586813 TIGITQ495A1 244 aa14.04□□□□□ -0.16
TRAF4-216ENST00000586813 OR4D10Q8NGI6 311 aa14.04□□□□□ -0.16
TRAF4-216ENST00000586813 OR13C8Q8NGS7 320 aa14.04□□□□□ -0.16
TRAF4-216ENST00000586813 RNASE11Q8TAA1 199 aaKnown RBP14.04□□□□□ -0.16
TRAF4-216ENST00000586813 MTFP1Q9UDX5 166 aa14.04□□□□□ -0.16
TRAF4-216ENST00000586813 ACTL10Q5JWF8 245 aa14.03□□□□□ -0.16
TRAF4-216ENST00000586813 MZT2AQ6P582 158 aa14.03□□□□□ -0.16
TRAF4-216ENST00000586813 ZFAND1Q8TCF1 268 aa14.03□□□□□ -0.16
TRAF4-216ENST00000586813 EXTL2Q9UBQ6 330 aa14.03□□□□□ -0.16
TRAF4-216ENST00000586813 X6R8D5 127 aa14.03□□□□□ -0.16
TRAF4-216ENST00000586813 TRAV30A0A087WSZ9 112 aa14.02□□□□□ -0.17
TRAF4-216ENST00000586813 B3GALNT1O75752 331 aa14.02□□□□□ -0.17
TRAF4-216ENST00000586813 HLA-DMBP28068 263 aa14.02□□□□□ -0.17
TRAF4-216ENST00000586813 SPCS3P61009 180 aa14.02□□□□□ -0.17
TRAF4-216ENST00000586813 SCGB2B2Q4G0G5 96 aa14.02□□□□□ -0.17
TRAF4-216ENST00000586813 AARDQ4LEZ3 155 aa14.02□□□□□ -0.17
TRAF4-216ENST00000586813 Q6ZRM9 215 aa14.02□□□□□ -0.17
TRAF4-216ENST00000586813 Q6ZTC4 211 aa14.02□□□□□ -0.17
TRAF4-216ENST00000586813 TERB2Q8NHR7 220 aa14.02□□□□□ -0.17
TRAF4-216ENST00000586813 AP3S1Q92572 193 aa14.02□□□□□ -0.17
TRAF4-216ENST00000586813 RPS10-NUDT3A0A1W2PQS6 291 aa14.01□□□□□ -0.17
TRAF4-216ENST00000586813 CD74P04233 296 aa14.01□□□□□ -0.17
TRAF4-216ENST00000586813 IGLC1P0CG04 106 aa14.01□□□□□ -0.17
TRAF4-216ENST00000586813 HTR2BP41595 481 aa14.01□□□□□ -0.17
TRAF4-216ENST00000586813 EIF2B2P49770 351 aaKnown RBP14.01□□□□□ -0.17
TRAF4-216ENST00000586813 FAM219AQ8IW50 185 aa14.01□□□□□ -0.17
TRAF4-216ENST00000586813 OR52E5Q8NH55 327 aa14.01□□□□□ -0.17
TRAF4-216ENST00000586813 MARCH1Q8TCQ1 289 aa14.01□□□□□ -0.17
TRAF4-216ENST00000586813 ABHD1Q96SE0 405 aa14.01□□□□□ -0.17
TRAF4-216ENST00000586813 CLEC5AQ9NY25 188 aa14.01□□□□□ -0.17
TRAF4-216ENST00000586813 U3KQE9 123 aa14.01□□□□□ -0.17
TRAF4-216ENST00000586813 ELOA3CA0A087WX78 387 aaPredicted RBP14□□□□□ -0.17
TRAF4-216ENST00000586813 HELTA6NFD8 242 aa14□□□□□ -0.17
TRAF4-216ENST00000586813 TAS2R19P59542 299 aa14□□□□□ -0.17
TRAF4-216ENST00000586813 DHRS2Q13268 280 aa14□□□□□ -0.17
TRAF4-216ENST00000586813 TMEM229BQ8NBD8 167 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms