RNA–Protein interactions for RNA: ENST00000585229.1

SMCHD1-212, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-212ENST00000585229 KANTRA0A1W2PQU2 76 aa7.71□□□□□ -1.18
SMCHD1-212ENST00000585229 TMEM89A2RUT3 159 aa7.71□□□□□ -1.18
SMCHD1-212ENST00000585229 G3V318 75 aa7.71□□□□□ -1.18
SMCHD1-212ENST00000585229 TCF21O43680 179 aa7.71□□□□□ -1.18
SMCHD1-212ENST00000585229 NDUFA7O95182 113 aa7.71□□□□□ -1.18
SMCHD1-212ENST00000585229 APELAP0DMC3 54 aa7.71□□□□□ -1.18
SMCHD1-212ENST00000585229 OPCMLQ14982 345 aa7.71□□□□□ -1.18
SMCHD1-212ENST00000585229 C19orf35Q6ZS72 473 aa7.71□□□□□ -1.18
SMCHD1-212ENST00000585229 OR5C1Q8NGR4 320 aa7.71□□□□□ -1.18
SMCHD1-212ENST00000585229 STOML3Q8TAV4 291 aa7.71□□□□□ -1.18
SMCHD1-212ENST00000585229 CACNG8Q8WXS5 425 aa7.71□□□□□ -1.18
SMCHD1-212ENST00000585229 ATP5SQ99766 215 aa7.71□□□□□ -1.18
SMCHD1-212ENST00000585229 TMEM147Q9BVK8 224 aa7.71□□□□□ -1.18
SMCHD1-212ENST00000585229 ARV1Q9H2C2 271 aa7.71□□□□□ -1.18
SMCHD1-212ENST00000585229 FNDC4Q9H6D8 234 aaPredicted RBP7.71□□□□□ -1.18
SMCHD1-212ENST00000585229 WFDC1Q9HC57 220 aa7.71□□□□□ -1.18
SMCHD1-212ENST00000585229 AP5S1Q9NUS5 200 aa7.71□□□□□ -1.18
SMCHD1-212ENST00000585229 CUBNO60494 3623 aa7.71□□□□□ -1.18
SMCHD1-212ENST00000585229 RPS10-NUDT3A0A1W2PQS6 291 aa7.7□□□□□ -1.18
SMCHD1-212ENST00000585229 I3L2K1 104 aa7.7□□□□□ -1.18
SMCHD1-212ENST00000585229 K7EIM0 57 aa7.7□□□□□ -1.18
SMCHD1-212ENST00000585229 CYB5BO43169 146 aa7.7□□□□□ -1.18
SMCHD1-212ENST00000585229 DFFBO76075 338 aa7.7□□□□□ -1.18
SMCHD1-212ENST00000585229 IGHG4P01861 327 aa7.7□□□□□ -1.18
SMCHD1-212ENST00000585229 IFNA4P05014 189 aa7.7□□□□□ -1.18
SMCHD1-212ENST00000585229 FCGR2BP31994 310 aaPredicted RBP7.7□□□□□ -1.18
SMCHD1-212ENST00000585229 AP2S1P53680 142 aaPredicted RBP7.7□□□□□ -1.18
SMCHD1-212ENST00000585229 TMEM95Q3KNT9 176 aa7.7□□□□□ -1.18
SMCHD1-212ENST00000585229 OR8G2PQ6IF36 304 aa7.7□□□□□ -1.18
SMCHD1-212ENST00000585229 SLC16A13Q7RTY0 426 aa7.7□□□□□ -1.18
SMCHD1-212ENST00000585229 UBAC2Q8NBM4 344 aa7.7□□□□□ -1.18
SMCHD1-212ENST00000585229 OR5T1Q8NG75 326 aa7.7□□□□□ -1.18
SMCHD1-212ENST00000585229 WIPF2Q8TF74 440 aaPredicted RBP7.7□□□□□ -1.18
SMCHD1-212ENST00000585229 NOL4LQ96MY1 436 aaPredicted RBP7.7□□□□□ -1.18
SMCHD1-212ENST00000585229 GON7Q9BXV9 100 aa7.7□□□□□ -1.18
SMCHD1-212ENST00000585229 ZC4H2Q9NQZ6 224 aa7.7□□□□□ -1.18
SMCHD1-212ENST00000585229 SERTAD4Q9NUC0 356 aa7.7□□□□□ -1.18
SMCHD1-212ENST00000585229 PAIP2BQ9ULR5 123 aaKnown RBP7.7□□□□□ -1.18
SMCHD1-212ENST00000585229 MT-CO2P00403 227 aa7.69□□□□□ -1.18
SMCHD1-212ENST00000585229 ZNF266Q14584 549 aa7.69□□□□□ -1.18
SMCHD1-212ENST00000585229 CLINT1Q14677 625 aa7.69□□□□□ -1.18
SMCHD1-212ENST00000585229 RPL7L1Q6DKI1 246 aaKnown RBP7.69□□□□□ -1.18
SMCHD1-212ENST00000585229 ETFRF1Q6IPR1 90 aa7.69□□□□□ -1.18
SMCHD1-212ENST00000585229 SLC25A24Q6NUK1 477 aa7.69□□□□□ -1.18
SMCHD1-212ENST00000585229 TMEM144Q7Z5S9 345 aa7.69□□□□□ -1.18
SMCHD1-212ENST00000585229 SLC51BQ86UW2 128 aa7.69□□□□□ -1.18
SMCHD1-212ENST00000585229 TMEM217Q8N7C4 229 aa7.69□□□□□ -1.18
SMCHD1-212ENST00000585229 RNF152Q8N8N0 203 aa7.69□□□□□ -1.18
SMCHD1-212ENST00000585229 TMEM116Q8NCL8 245 aa7.69□□□□□ -1.18
SMCHD1-212ENST00000585229 MYOZ3Q8TDC0 251 aa7.69□□□□□ -1.18
SMCHD1-212ENST00000585229 VN1R17PQ8TDU5 208 aa7.69□□□□□ -1.18
SMCHD1-212ENST00000585229 ATP6V0BQ99437 205 aa7.69□□□□□ -1.18
SMCHD1-212ENST00000585229 SMIM3Q9BZL3 60 aa7.69□□□□□ -1.18
SMCHD1-212ENST00000585229 UQCC1Q9NVA1 299 aa7.69□□□□□ -1.18
SMCHD1-212ENST00000585229 THYN1Q9P016 225 aa7.69□□□□□ -1.18
SMCHD1-212ENST00000585229 LINC00527Q9UJ94 153 aa7.69□□□□□ -1.18
SMCHD1-212ENST00000585229 WDR83OSQ9Y284 106 aa7.69□□□□□ -1.18
SMCHD1-212ENST00000585229 LSM4Q9Y4Z0 139 aaKnown RBP7.69□□□□□ -1.18
SMCHD1-212ENST00000585229 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.69□□□□□ -1.18
SMCHD1-212ENST00000585229 FAM223BA6NKX1 122 aa7.68□□□□□ -1.18
SMCHD1-212ENST00000585229 JTBO76095 146 aa7.68□□□□□ -1.18
SMCHD1-212ENST00000585229 NDUFB8O95169 186 aa7.68□□□□□ -1.18
SMCHD1-212ENST00000585229 PRH1P02810 166 aa7.68□□□□□ -1.18
SMCHD1-212ENST00000585229 DEFA4P12838 97 aa7.68□□□□□ -1.18
SMCHD1-212ENST00000585229 PSMB8P28062 276 aa7.68□□□□□ -1.18
SMCHD1-212ENST00000585229 OPRK1P41145 380 aa7.68□□□□□ -1.18
SMCHD1-212ENST00000585229 EIF5AP63241 154 aaKnown RBP7.68□□□□□ -1.18
SMCHD1-212ENST00000585229 GAMTQ14353 236 aa7.68□□□□□ -1.18
SMCHD1-212ENST00000585229 FAM223AQ8IWN6 122 aa7.68□□□□□ -1.18
SMCHD1-212ENST00000585229 COMMD1Q8N668 190 aa7.68□□□□□ -1.18
SMCHD1-212ENST00000585229 THAP8Q8NA92 274 aa7.68□□□□□ -1.18
SMCHD1-212ENST00000585229 NECAP1Q8NC96 275 aa7.68□□□□□ -1.18
SMCHD1-212ENST00000585229 OR2T6Q8NHC8 308 aa7.68□□□□□ -1.18
SMCHD1-212ENST00000585229 SLC35E1Q96K37 410 aa7.68□□□□□ -1.18
SMCHD1-212ENST00000585229 GINS3Q9BRX5 216 aa7.68□□□□□ -1.18
SMCHD1-212ENST00000585229 SLA2Q9H6Q3 261 aa7.68□□□□□ -1.18
SMCHD1-212ENST00000585229 NPVFQ9HCQ7 196 aa7.68□□□□□ -1.18
SMCHD1-212ENST00000585229 MRPL36Q9P0J6 103 aaKnown RBP7.68□□□□□ -1.18
SMCHD1-212ENST00000585229 TEP1Q99973 2627 aaKnown RBP7.67□□□□□ -1.18
SMCHD1-212ENST00000585229 BORCS7-ASMTA0A0B4J1R7 106 aa7.67□□□□□ -1.18
SMCHD1-212ENST00000585229 UBE2L5PA0A1B0GUS4 154 aa7.67□□□□□ -1.18
SMCHD1-212ENST00000585229 PSMB11A5LHX3 300 aa7.67□□□□□ -1.18
SMCHD1-212ENST00000585229 MPDU1O75352 247 aa7.67□□□□□ -1.18
SMCHD1-212ENST00000585229 OR2J3O76001 311 aa7.67□□□□□ -1.18
SMCHD1-212ENST00000585229 CRYBA1P05813 215 aa7.67□□□□□ -1.18
SMCHD1-212ENST00000585229 ELANEP08246 267 aa7.67□□□□□ -1.18
SMCHD1-212ENST00000585229 SLC35B1P78383 322 aa7.67□□□□□ -1.18
SMCHD1-212ENST00000585229 RHOGP84095 191 aa7.67□□□□□ -1.18
SMCHD1-212ENST00000585229 FOXE3Q13461 319 aa7.67□□□□□ -1.18
SMCHD1-212ENST00000585229 MLANAQ16655 118 aa7.67□□□□□ -1.18
SMCHD1-212ENST00000585229 CENPVQ7Z7K6 275 aaPredicted RBP7.67□□□□□ -1.18
SMCHD1-212ENST00000585229 OR4X1Q8NH49 305 aa7.67□□□□□ -1.18
SMCHD1-212ENST00000585229 SCARB1Q8WTV0 552 aa7.67□□□□□ -1.18
SMCHD1-212ENST00000585229 ST8SIA2Q92186 375 aa7.67□□□□□ -1.18
SMCHD1-212ENST00000585229 TAF15Q92804 592 aaKnown RBP eCLIP7.67□□□□□ -1.18
SMCHD1-212ENST00000585229 USMG5Q96IX5 58 aa7.67□□□□□ -1.18
SMCHD1-212ENST00000585229 TXN2Q99757 166 aa7.67□□□□□ -1.18
SMCHD1-212ENST00000585229 ZNF471Q9BX82 626 aaPredicted RBP7.67□□□□□ -1.18
SMCHD1-212ENST00000585229 WDR61Q9GZS3 305 aaKnown RBP7.67□□□□□ -1.18
SMCHD1-212ENST00000585229 FBXL7Q9UJT9 491 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms