RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 BRS3P32247 399 aa11.51□□□□□ -0.57
CDK5RAP3-237ENST00000585163 MEF2CQ06413 473 aaPredicted RBP11.51□□□□□ -0.57
CDK5RAP3-237ENST00000585163 ETFRF1Q6IPR1 90 aa11.51□□□□□ -0.57
CDK5RAP3-237ENST00000585163 NUP37Q8NFH4 326 aa11.51□□□□□ -0.57
CDK5RAP3-237ENST00000585163 ATG101Q9BSB4 218 aa11.51□□□□□ -0.57
CDK5RAP3-237ENST00000585163 PARD6AQ9NPB6 346 aa11.51□□□□□ -0.57
CDK5RAP3-237ENST00000585163 CDC42EP3Q9UKI2 254 aa11.51□□□□□ -0.57
CDK5RAP3-237ENST00000585163 TRAV5A0A0B4J249 113 aa11.5□□□□□ -0.57
CDK5RAP3-237ENST00000585163 NKX6-3A6NJ46 265 aa11.5□□□□□ -0.57
CDK5RAP3-237ENST00000585163 MGST1P10620 155 aaKnown RBP11.5□□□□□ -0.57
CDK5RAP3-237ENST00000585163 CEACAM8P31997 349 aaPredicted RBP11.5□□□□□ -0.57
CDK5RAP3-237ENST00000585163 COMPP49747 757 aaPredicted RBP11.5□□□□□ -0.57
CDK5RAP3-237ENST00000585163 TDGF1P3P51864 188 aa11.5□□□□□ -0.57
CDK5RAP3-237ENST00000585163 TCL1AP56279 114 aa11.5□□□□□ -0.57
CDK5RAP3-237ENST00000585163 SLC35B1P78383 322 aa11.5□□□□□ -0.57
CDK5RAP3-237ENST00000585163 CCL8P80075 99 aa11.5□□□□□ -0.57
CDK5RAP3-237ENST00000585163 Q6ZS92 163 aa11.5□□□□□ -0.57
CDK5RAP3-237ENST00000585163 SIGLECL1Q8N7X8 197 aa11.5□□□□□ -0.57
CDK5RAP3-237ENST00000585163 VN1R17PQ8TDU5 208 aa11.5□□□□□ -0.57
CDK5RAP3-237ENST00000585163 AMY1AP04745 511 aa11.5□□□□□ -0.57
CDK5RAP3-237ENST00000585163 TNFRSF1AP19438 455 aa11.5□□□□□ -0.57
CDK5RAP3-237ENST00000585163 USF1P22415 310 aaPredicted RBP11.5□□□□□ -0.57
CDK5RAP3-237ENST00000585163 UBE2L3P68036 154 aaKnown RBP11.5□□□□□ -0.57
CDK5RAP3-237ENST00000585163 TMEM183BQ1AE95 376 aa11.5□□□□□ -0.57
CDK5RAP3-237ENST00000585163 MRPL52Q86TS9 123 aaKnown RBP11.5□□□□□ -0.57
CDK5RAP3-237ENST00000585163 FLYWCH2Q96CP2 140 aaKnown RBP11.5□□□□□ -0.57
CDK5RAP3-237ENST00000585163 MIEN1Q9BRT3 115 aa11.5□□□□□ -0.57
CDK5RAP3-237ENST00000585163 HLA-DQA1P01909 254 aa11.49□□□□□ -0.57
CDK5RAP3-237ENST00000585163 CCL3L1P16619 93 aa11.49□□□□□ -0.57
CDK5RAP3-237ENST00000585163 A0A1W2PN81 502 aa11.49□□□□□ -0.57
CDK5RAP3-237ENST00000585163 WT1-ASQ06250 92 aa11.49□□□□□ -0.57
CDK5RAP3-237ENST00000585163 KIAA1644Q3SXP7 199 aa11.49□□□□□ -0.57
CDK5RAP3-237ENST00000585163 ZNF705AQ6ZN79 300 aaPredicted RBP11.49□□□□□ -0.57
CDK5RAP3-237ENST00000585163 OR4C13Q8NGP0 309 aa11.49□□□□□ -0.57
CDK5RAP3-237ENST00000585163 TMEM167AQ8TBQ9 72 aa11.49□□□□□ -0.57
CDK5RAP3-237ENST00000585163 VAMP8Q9BV40 100 aa11.49□□□□□ -0.57
CDK5RAP3-237ENST00000585163 FBXL7Q9UJT9 491 aa11.49□□□□□ -0.57
CDK5RAP3-237ENST00000585163 CACNA1HO95180 2353 aa11.48□□□□□ -0.57
CDK5RAP3-237ENST00000585163 BMPR1BO00238 502 aa11.48□□□□□ -0.57
CDK5RAP3-237ENST00000585163 SSBP2P81877 361 aaPredicted RBP11.48□□□□□ -0.57
CDK5RAP3-237ENST00000585163 MRPL54Q6P161 138 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP3-237ENST00000585163 OR4A5Q8NH83 315 aa11.48□□□□□ -0.57
CDK5RAP3-237ENST00000585163 FNDC4Q9H6D8 234 aaPredicted RBP11.48□□□□□ -0.57
CDK5RAP3-237ENST00000585163 SERTAD4Q9NUC0 356 aa11.48□□□□□ -0.57
CDK5RAP3-237ENST00000585163 PAM16Q9Y3D7 125 aa11.48□□□□□ -0.57
CDK5RAP3-237ENST00000585163 RNF114Q9Y508 228 aa11.48□□□□□ -0.57
CDK5RAP3-237ENST00000585163 IZUMO1RA6ND01 250 aa11.48□□□□□ -0.57
CDK5RAP3-237ENST00000585163 CGB1A6NKQ9 187 aa11.48□□□□□ -0.57
CDK5RAP3-237ENST00000585163 M0QZK8 103 aa11.48□□□□□ -0.57
CDK5RAP3-237ENST00000585163 FCN3O75636 299 aa11.48□□□□□ -0.57
CDK5RAP3-237ENST00000585163 REG1BP48304 166 aa11.48□□□□□ -0.57
CDK5RAP3-237ENST00000585163 TMEM200BQ69YZ2 307 aa11.48□□□□□ -0.57
CDK5RAP3-237ENST00000585163 VSTM2AQ8TAG5 236 aa11.48□□□□□ -0.57
CDK5RAP3-237ENST00000585163 KCNS1Q96KK3 526 aa11.48□□□□□ -0.57
CDK5RAP3-237ENST00000585163 LINC00479Q96M42 142 aa11.48□□□□□ -0.57
CDK5RAP3-237ENST00000585163 RCHY1Q96PM5 261 aa11.48□□□□□ -0.57
CDK5RAP3-237ENST00000585163 ZNF355PQ9NSJ1 428 aa11.48□□□□□ -0.57
CDK5RAP3-237ENST00000585163 ZNF586Q9NXT0 402 aa11.48□□□□□ -0.57
CDK5RAP3-237ENST00000585163 TBL2Q9Y4P3 447 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP3-237ENST00000585163 AMMECR1Q9Y4X0 333 aaPredicted RBP11.48□□□□□ -0.57
CDK5RAP3-237ENST00000585163 A0A1W2PS18 150 aa11.47□□□□□ -0.57
CDK5RAP3-237ENST00000585163 C17orf100A8MU93 164 aa11.47□□□□□ -0.57
CDK5RAP3-237ENST00000585163 COX7A2P2O60397 106 aa11.47□□□□□ -0.57
CDK5RAP3-237ENST00000585163 ZNF253O75346 499 aa11.47□□□□□ -0.57
CDK5RAP3-237ENST00000585163 SRIP30626 198 aa11.47□□□□□ -0.57
CDK5RAP3-237ENST00000585163 GAGE1Q13065 139 aa11.47□□□□□ -0.57
CDK5RAP3-237ENST00000585163 C10orf113Q5VZT2 155 aa11.47□□□□□ -0.57
CDK5RAP3-237ENST00000585163 TMEM108Q6UXF1 575 aa11.47□□□□□ -0.57
CDK5RAP3-237ENST00000585163 PDPNQ86YL7 162 aa11.47□□□□□ -0.57
CDK5RAP3-237ENST00000585163 NHLRC2Q8NBF2 726 aa11.47□□□□□ -0.57
CDK5RAP3-237ENST00000585163 C22orf15Q8WYQ4 148 aa11.47□□□□□ -0.57
CDK5RAP3-237ENST00000585163 FAM103A1Q9BTL3 118 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-237ENST00000585163 OTOGLQ3ZCN5 2332 aa11.47□□□□□ -0.57
CDK5RAP3-237ENST00000585163 TCRBV4S1A1TA0A5B7 111 aa11.47□□□□□ -0.57
CDK5RAP3-237ENST00000585163 CA1P00915 261 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP3-237ENST00000585163 PYYP10082 97 aa11.47□□□□□ -0.57
CDK5RAP3-237ENST00000585163 FAM71F2Q6NXP2 309 aa11.47□□□□□ -0.57
CDK5RAP3-237ENST00000585163 PATE2Q6UY27 113 aa11.47□□□□□ -0.57
CDK5RAP3-237ENST00000585163 Q8N976 141 aa11.47□□□□□ -0.57
CDK5RAP3-237ENST00000585163 OR1L4Q8NGR5 311 aa11.47□□□□□ -0.57
CDK5RAP3-237ENST00000585163 FAM168AQ92567 244 aa11.47□□□□□ -0.57
CDK5RAP3-237ENST00000585163 NPIPB3Q92617 1050 aa11.47□□□□□ -0.57
CDK5RAP3-237ENST00000585163 PAXXQ9BUH6 204 aa11.47□□□□□ -0.57
CDK5RAP3-237ENST00000585163 ZNF430Q9H8G1 570 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP3-237ENST00000585163 NRN1Q9NPD7 142 aa11.47□□□□□ -0.57
CDK5RAP3-237ENST00000585163 SMG1Q96Q15 3661 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-237ENST00000585163 IGKV1D-37A0A075B6S9 117 aa11.46□□□□□ -0.57
CDK5RAP3-237ENST00000585163 GOSR1O95249 250 aa11.46□□□□□ -0.57
CDK5RAP3-237ENST00000585163 AMTP48728 403 aa11.46□□□□□ -0.57
CDK5RAP3-237ENST00000585163 ADIPOQQ15848 244 aa11.46□□□□□ -0.57
CDK5RAP3-237ENST00000585163 FAM231DQ6ZW35 169 aa11.46□□□□□ -0.57
CDK5RAP3-237ENST00000585163 ZCCHC24Q8N2G6 241 aaKnown RBP11.46□□□□□ -0.57
CDK5RAP3-237ENST00000585163 OR10X1Q8NGY0 326 aa11.46□□□□□ -0.57
CDK5RAP3-237ENST00000585163 FSTL3O95633 263 aa11.46□□□□□ -0.58
CDK5RAP3-237ENST00000585163 IGLV2-23P01705 113 aa11.46□□□□□ -0.58
CDK5RAP3-237ENST00000585163 SUB1P53999 127 aaKnown RBP eCLIP11.46□□□□□ -0.58
CDK5RAP3-237ENST00000585163 KRTDAPP60985 99 aa11.46□□□□□ -0.58
CDK5RAP3-237ENST00000585163 RBX1P62877 108 aa11.46□□□□□ -0.58
CDK5RAP3-237ENST00000585163 DIAPH2-AS1Q14236 149 aa11.46□□□□□ -0.58
CDK5RAP3-237ENST00000585163 C10orf55Q5SWW7 151 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms