RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 LYL1P12980 280 aa9.3□□□□□ -0.92
SS18-225ENST00000585121 BTCP35070 178 aa9.3□□□□□ -0.92
SS18-225ENST00000585121 NPBWR1P48145 328 aa9.3□□□□□ -0.92
SS18-225ENST00000585121 RBPMSQ93062 196 aaKnown RBP9.3□□□□□ -0.92
SS18-225ENST00000585121 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.3□□□□□ -0.92
SS18-225ENST00000585121 GPR132Q9UNW8 380 aa9.3□□□□□ -0.92
SS18-225ENST00000585121 CRYM-AS1A6NIL9 109 aa9.29□□□□□ -0.92
SS18-225ENST00000585121 F8W735 103 aaPredicted RBP9.29□□□□□ -0.92
SS18-225ENST00000585121 SCGB2A1O75556 95 aa9.29□□□□□ -0.92
SS18-225ENST00000585121 CDS2O95674 445 aa9.29□□□□□ -0.92
SS18-225ENST00000585121 TCRBP04435 133 aa9.29□□□□□ -0.92
SS18-225ENST00000585121 ADMP35318 185 aa9.29□□□□□ -0.92
SS18-225ENST00000585121 SPCS3P61009 180 aa9.29□□□□□ -0.92
SS18-225ENST00000585121 GLYATL2Q8WU03 294 aa9.29□□□□□ -0.92
SS18-225ENST00000585121 SPAG8Q99932 426 aaPredicted RBP9.29□□□□□ -0.92
SS18-225ENST00000585121 CACFD1Q9UGQ2 172 aa9.29□□□□□ -0.92
SS18-225ENST00000585121 TSPAN4O14817 238 aa9.28□□□□□ -0.92
SS18-225ENST00000585121 ZNF207O43670 478 aaKnown RBP9.28□□□□□ -0.92
SS18-225ENST00000585121 BMI1P35226 326 aa9.28□□□□□ -0.92
SS18-225ENST00000585121 TMEM268Q5VZI3 342 aa9.28□□□□□ -0.92
SS18-225ENST00000585121 LINC00322Q6ZN03 302 aaPredicted RBP9.28□□□□□ -0.92
SS18-225ENST00000585121 SELENOHQ8IZQ5 122 aaKnown RBP9.28□□□□□ -0.92
SS18-225ENST00000585121 GINS3Q9BRX5 216 aa9.28□□□□□ -0.92
SS18-225ENST00000585121 WFDC10AQ9H1F0 79 aa9.28□□□□□ -0.92
SS18-225ENST00000585121 IGHV3OR16-8A0A075B7F1 116 aa9.27□□□□□ -0.93
SS18-225ENST00000585121 RBMY1BA6NDE4 496 aaKnown RBP9.27□□□□□ -0.93
SS18-225ENST00000585121 RBMY1EA6NEQ0 496 aaKnown RBP9.27□□□□□ -0.93
SS18-225ENST00000585121 OR4C46A6NHA9 309 aa9.27□□□□□ -0.93
SS18-225ENST00000585121 INMT-MINDY4F8WBC2 141 aa9.27□□□□□ -0.93
SS18-225ENST00000585121 IGHV3-48P01763 117 aa9.27□□□□□ -0.93
SS18-225ENST00000585121 RBMY1DP0C7P1 496 aaKnown RBP9.27□□□□□ -0.93
SS18-225ENST00000585121 BCAP31P51572 246 aa9.27□□□□□ -0.93
SS18-225ENST00000585121 TMEM116Q8NCL8 245 aa9.27□□□□□ -0.93
SS18-225ENST00000585121 OR52E5Q8NH55 327 aa9.27□□□□□ -0.93
SS18-225ENST00000585121 SLC25A21Q9BQT8 299 aaPredicted RBP9.27□□□□□ -0.93
SS18-225ENST00000585121 SMPXQ9UHP9 88 aa9.27□□□□□ -0.93
SS18-225ENST00000585121 hCG_2014768A0A024R1R8 64 aa9.26□□□□□ -0.93
SS18-225ENST00000585121 LOC102724200A0A096LPH7 203 aaPredicted RBP9.26□□□□□ -0.93
SS18-225ENST00000585121 TRAV14DV4A0A0A6YYC5 116 aa9.26□□□□□ -0.93
SS18-225ENST00000585121 PIGBOS1A0A0B4J2F0 54 aa9.26□□□□□ -0.93
SS18-225ENST00000585121 A0A0G2JRQ6 117 aa9.26□□□□□ -0.93
SS18-225ENST00000585121 IGHV7-4-1A0A0J9YVY3 117 aa9.26□□□□□ -0.93
SS18-225ENST00000585121 NDUFB6O95139 128 aa9.26□□□□□ -0.93
SS18-225ENST00000585121 RNASE2P10153 161 aaKnown RBP9.26□□□□□ -0.93
SS18-225ENST00000585121 ANXA3P12429 323 aa9.26□□□□□ -0.93
SS18-225ENST00000585121 OPRK1P41145 380 aa9.26□□□□□ -0.93
SS18-225ENST00000585121 CCR6P51684 374 aa9.26□□□□□ -0.93
SS18-225ENST00000585121 RBMS2Q15434 407 aaKnown RBP9.26□□□□□ -0.93
SS18-225ENST00000585121 CHAC2Q8WUX2 184 aa9.26□□□□□ -0.93
SS18-225ENST00000585121 IL22RA2Q969J5 263 aa9.26□□□□□ -0.93
SS18-225ENST00000585121 RHPN1-AS1Q9BWJ2 59 aa9.26□□□□□ -0.93
SS18-225ENST00000585121 GGTLC1Q9BX51 225 aa9.26□□□□□ -0.93
SS18-225ENST00000585121 HIPK2Q9H2X6 1198 aa9.26□□□□□ -0.93
SS18-225ENST00000585121 HEYLQ9NQ87 328 aaPredicted RBP9.26□□□□□ -0.93
SS18-225ENST00000585121 CACNG5Q9UF02 275 aa9.26□□□□□ -0.93
SS18-225ENST00000585121 TMEM56-RWDD3S4R434 201 aa9.26□□□□□ -0.93
SS18-225ENST00000585121 RPS10-NUDT3A0A1W2PQS6 291 aa9.26□□□□□ -0.93
SS18-225ENST00000585121 CEBPZOSA8MTT3 80 aa9.26□□□□□ -0.93
SS18-225ENST00000585121 CD5P06127 495 aa9.26□□□□□ -0.93
SS18-225ENST00000585121 H2AFB2P0C5Z0 115 aa9.26□□□□□ -0.93
SS18-225ENST00000585121 AKR1C4P17516 323 aa9.26□□□□□ -0.93
SS18-225ENST00000585121 HTR2BP41595 481 aa9.26□□□□□ -0.93
SS18-225ENST00000585121 CASC10Q5T4H9 136 aa9.26□□□□□ -0.93
SS18-225ENST00000585121 ZNF600Q6ZNG1 722 aa9.26□□□□□ -0.93
SS18-225ENST00000585121 Q6ZRM9 215 aa9.26□□□□□ -0.93
SS18-225ENST00000585121 NOXA1Q86UR1 476 aa9.26□□□□□ -0.93
SS18-225ENST00000585121 LHFPL5Q8TAF8 219 aa9.26□□□□□ -0.93
SS18-225ENST00000585121 PPP1R14BQ96C90 147 aa9.26□□□□□ -0.93
SS18-225ENST00000585121 GPR146Q96CH1 333 aa9.26□□□□□ -0.93
SS18-225ENST00000585121 GALNT14Q96FL9 552 aa9.26□□□□□ -0.93
SS18-225ENST00000585121 OR10C1Q96KK4 312 aa9.26□□□□□ -0.93
SS18-225ENST00000585121 NUDT15Q9NV35 164 aa9.26□□□□□ -0.93
SS18-225ENST00000585121 CHEK1O14757 476 aa9.25□□□□□ -0.93
SS18-225ENST00000585121 PRAF2O60831 178 aa9.25□□□□□ -0.93
SS18-225ENST00000585121 PFDN1O60925 122 aa9.25□□□□□ -0.93
SS18-225ENST00000585121 TMEM50AO95807 157 aa9.25□□□□□ -0.93
SS18-225ENST00000585121 SULT1A3P0DMM9 295 aa9.25□□□□□ -0.93
SS18-225ENST00000585121 SULT1A4P0DMN0 295 aa9.25□□□□□ -0.93
SS18-225ENST00000585121 CMC4P56277 68 aaPredicted RBP9.25□□□□□ -0.93
SS18-225ENST00000585121 PAFAH1B2P68402 229 aa9.25□□□□□ -0.93
SS18-225ENST00000585121 SRPXP78539 464 aa9.25□□□□□ -0.93
SS18-225ENST00000585121 TMEM187Q14656 261 aa9.25□□□□□ -0.93
SS18-225ENST00000585121 AARDQ4LEZ3 155 aa9.25□□□□□ -0.93
SS18-225ENST00000585121 PVRIGQ6DKI7 326 aa9.25□□□□□ -0.93
SS18-225ENST00000585121 TMEM231Q9H6L2 316 aa9.25□□□□□ -0.93
SS18-225ENST00000585121 EDA2RQ9HAV5 297 aa9.25□□□□□ -0.93
SS18-225ENST00000585121 TRAV30A0A087WSZ9 112 aa9.24□□□□□ -0.93
SS18-225ENST00000585121 APOC4P55056 127 aa9.24□□□□□ -0.93
SS18-225ENST00000585121 TOMM20LQ6UXN7 152 aa9.24□□□□□ -0.93
SS18-225ENST00000585121 LGI3Q8N145 548 aa9.24□□□□□ -0.93
SS18-225ENST00000585121 OR4X1Q8NH49 305 aa9.24□□□□□ -0.93
SS18-225ENST00000585121 IL17DQ8TAD2 202 aa9.24□□□□□ -0.93
SS18-225ENST00000585121 RNF2Q99496 336 aa9.24□□□□□ -0.93
SS18-225ENST00000585121 C20orf85Q9H1P6 137 aa9.24□□□□□ -0.93
SS18-225ENST00000585121 RETNQ9HD89 108 aa9.24□□□□□ -0.93
SS18-225ENST00000585121 UBQLN2Q9UHD9 624 aa9.24□□□□□ -0.93
SS18-225ENST00000585121 PUS1Q9Y606 427 aaKnown RBP eCLIP9.24□□□□□ -0.93
SS18-225ENST00000585121 TRAV6A0A075B6T7 132 aa9.23□□□□□ -0.93
SS18-225ENST00000585121 IGHV3-49A0A0A0MS15 119 aa9.23□□□□□ -0.93
SS18-225ENST00000585121 A0A0B4J2A0 478 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms