RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 GNG7O60262 68 aa11.03□□□□□ -0.64
VAPA-209ENST00000585042 DFFBO76075 338 aa11.03□□□□□ -0.64
VAPA-209ENST00000585042 ATG12O94817 140 aa11.03□□□□□ -0.64
VAPA-209ENST00000585042 PPP5CP53041 499 aa11.03□□□□□ -0.64
VAPA-209ENST00000585042 TCTAP57738 103 aa11.03□□□□□ -0.64
VAPA-209ENST00000585042 RND3P61587 244 aa11.03□□□□□ -0.64
VAPA-209ENST00000585042 OR4D10Q8NGI6 311 aa11.03□□□□□ -0.64
VAPA-209ENST00000585042 MISP3Q96FF7 219 aa11.03□□□□□ -0.64
VAPA-209ENST00000585042 SCGB3A2Q96PL1 93 aa11.03□□□□□ -0.64
VAPA-209ENST00000585042 SCP2D1Q9UJQ7 156 aa11.03□□□□□ -0.64
VAPA-209ENST00000585042 C14orf166Q9Y224 244 aaKnown RBP11.03□□□□□ -0.64
VAPA-209ENST00000585042 ANKRD20A5PA0PJZ0 165 aa11.02□□□□□ -0.65
VAPA-209ENST00000585042 INS-IGF2F8WCM5 200 aa11.02□□□□□ -0.65
VAPA-209ENST00000585042 B3GALNT1O75752 331 aa11.02□□□□□ -0.65
VAPA-209ENST00000585042 MT-CO2P00403 227 aa11.02□□□□□ -0.65
VAPA-209ENST00000585042 IFNA4P05014 189 aa11.02□□□□□ -0.65
VAPA-209ENST00000585042 NPBWR1P48145 328 aa11.02□□□□□ -0.65
VAPA-209ENST00000585042 PIGPP57054 158 aa11.02□□□□□ -0.65
VAPA-209ENST00000585042 SURF2Q15527 256 aaPredicted RBP11.02□□□□□ -0.65
VAPA-209ENST00000585042 DUSP18Q8NEJ0 188 aa11.02□□□□□ -0.65
VAPA-209ENST00000585042 VSIRQ9H7M9 311 aa11.02□□□□□ -0.65
VAPA-209ENST00000585042 TOMM5Q8N4H5 51 aa11.01□□□□□ -0.65
VAPA-209ENST00000585042 OR4C16Q8NGL9 310 aa11.01□□□□□ -0.65
VAPA-209ENST00000585042 OR11H2Q8NH07 326 aa11.01□□□□□ -0.65
VAPA-209ENST00000585042 C11orf45Q8TAV5 145 aa11.01□□□□□ -0.65
VAPA-209ENST00000585042 MARCH1Q8TCQ1 289 aa11.01□□□□□ -0.65
VAPA-209ENST00000585042 DEDD2Q8WXF8 326 aa11.01□□□□□ -0.65
VAPA-209ENST00000585042 MCUBQ9NWR8 336 aa11.01□□□□□ -0.65
VAPA-209ENST00000585042 IGKV1-39P01597 117 aa11□□□□□ -0.65
VAPA-209ENST00000585042 IGKV1D-39P04432 117 aa11□□□□□ -0.65
VAPA-209ENST00000585042 PI3P19957 117 aa11□□□□□ -0.65
VAPA-209ENST00000585042 ETV6P41212 452 aa11□□□□□ -0.65
VAPA-209ENST00000585042 TFPI2P48307 235 aa11□□□□□ -0.65
VAPA-209ENST00000585042 INPP1P49441 399 aa11□□□□□ -0.65
VAPA-209ENST00000585042 RBMS2Q15434 407 aaKnown RBP11□□□□□ -0.65
VAPA-209ENST00000585042 PVRIGQ6DKI7 326 aa11□□□□□ -0.65
VAPA-209ENST00000585042 TOMM20LQ6UXN7 152 aa11□□□□□ -0.65
VAPA-209ENST00000585042 ZNF600Q6ZNG1 722 aa11□□□□□ -0.65
VAPA-209ENST00000585042 TCF24Q7RTU0 167 aa11□□□□□ -0.65
VAPA-209ENST00000585042 CCDC190Q86UF4 302 aa11□□□□□ -0.65
VAPA-209ENST00000585042 OR51S1Q8NGJ8 323 aa11□□□□□ -0.65
VAPA-209ENST00000585042 OR13C8Q8NGS7 320 aa11□□□□□ -0.65
VAPA-209ENST00000585042 TMEM231Q9H6L2 316 aa11□□□□□ -0.65
VAPA-209ENST00000585042 TEX13DA0A0J9YY54 714 aaPredicted RBP10.99□□□□□ -0.65
VAPA-209ENST00000585042 C3orf85A0A1B0GTC6 90 aa10.99□□□□□ -0.65
VAPA-209ENST00000585042 DNASE2O00115 360 aaPredicted RBP10.99□□□□□ -0.65
VAPA-209ENST00000585042 CORTO00230 105 aa10.99□□□□□ -0.65
VAPA-209ENST00000585042 TMEM50AO95807 157 aa10.99□□□□□ -0.65
VAPA-209ENST00000585042 SNCAP37840 140 aa10.99□□□□□ -0.65
VAPA-209ENST00000585042 SUB1P53999 127 aaKnown RBP eCLIP10.99□□□□□ -0.65
VAPA-209ENST00000585042 TMEM187Q14656 261 aa10.99□□□□□ -0.65
VAPA-209ENST00000585042 ZNF124Q15973 351 aa10.99□□□□□ -0.65
VAPA-209ENST00000585042 TMEM41BQ5BJD5 291 aa10.99□□□□□ -0.65
VAPA-209ENST00000585042 FAAP20Q6NZ36 180 aa10.99□□□□□ -0.65
VAPA-209ENST00000585042 RPP25LQ8N5L8 163 aaKnown RBP10.99□□□□□ -0.65
VAPA-209ENST00000585042 MS4A6AQ9H2W1 248 aa10.99□□□□□ -0.65
VAPA-209ENST00000585042 V9GYH0 126 aa10.99□□□□□ -0.65
VAPA-209ENST00000585042 IGKV3-7A0A075B6H7 116 aa10.98□□□□□ -0.65
VAPA-209ENST00000585042 IGHV3-49A0A0A0MS15 119 aa10.98□□□□□ -0.65
VAPA-209ENST00000585042 A0A1W2PS18 150 aa10.98□□□□□ -0.65
VAPA-209ENST00000585042 ST8SIA3O43173 380 aa10.98□□□□□ -0.65
VAPA-209ENST00000585042 TRIM16LQ309B1 348 aa10.98□□□□□ -0.65
VAPA-209ENST00000585042 GBGT1Q8N5D6 347 aa10.98□□□□□ -0.65
VAPA-209ENST00000585042 C2CD4CQ8TF44 421 aa10.98□□□□□ -0.65
VAPA-209ENST00000585042 ST8SIA2Q92186 375 aa10.98□□□□□ -0.65
VAPA-209ENST00000585042 MRGPRFQ96AM1 343 aa10.98□□□□□ -0.65
VAPA-209ENST00000585042 PINX1Q96BK5 328 aaKnown RBP10.98□□□□□ -0.65
VAPA-209ENST00000585042 HRH4Q9H3N8 390 aa10.98□□□□□ -0.65
VAPA-209ENST00000585042 KCNIP3Q9Y2W7 256 aa10.98□□□□□ -0.65
VAPA-209ENST00000585042 C11orf94C9JXX5 98 aa10.97□□□□□ -0.65
VAPA-209ENST00000585042 CA1P00915 261 aaPredicted RBP10.97□□□□□ -0.65
VAPA-209ENST00000585042 IGHV3-48P01763 117 aa10.97□□□□□ -0.65
VAPA-209ENST00000585042 NPPCP23582 126 aa10.97□□□□□ -0.65
VAPA-209ENST00000585042 AKR1C2P52895 323 aa10.97□□□□□ -0.65
VAPA-209ENST00000585042 NANOS2P60321 138 aaKnown RBP10.97□□□□□ -0.65
VAPA-209ENST00000585042 TRIQKQ629K1 86 aa10.97□□□□□ -0.65
VAPA-209ENST00000585042 RNASE11Q8TAA1 199 aaKnown RBP10.97□□□□□ -0.65
VAPA-209ENST00000585042 RRNAD1Q96FB5 475 aaKnown RBP10.97□□□□□ -0.65
VAPA-209ENST00000585042 ZFAND3Q9H8U3 227 aa10.97□□□□□ -0.65
VAPA-209ENST00000585042 GPR132Q9UNW8 380 aa10.97□□□□□ -0.65
VAPA-209ENST00000585042 PUS1Q9Y606 427 aaKnown RBP eCLIP10.97□□□□□ -0.65
VAPA-209ENST00000585042 KMT2AQ03164 3969 aa10.97□□□□□ -0.65
VAPA-209ENST00000585042 IGHV3OR16-13A0A075B7E8 117 aa10.96□□□□□ -0.65
VAPA-209ENST00000585042 IGHV3-74A0A0B4J1X5 117 aa10.96□□□□□ -0.65
VAPA-209ENST00000585042 A0A0B4J293 547 aa10.96□□□□□ -0.65
VAPA-209ENST00000585042 PIGBOS1A0A0B4J2F0 54 aa10.96□□□□□ -0.65
VAPA-209ENST00000585042 SCGB2A1O75556 95 aa10.96□□□□□ -0.65
VAPA-209ENST00000585042 P0C879 139 aa10.96□□□□□ -0.65
VAPA-209ENST00000585042 DEFB131AP59861 70 aa10.96□□□□□ -0.65
VAPA-209ENST00000585042 DHODHQ02127 395 aa10.96□□□□□ -0.65
VAPA-209ENST00000585042 KLF9Q13886 244 aaPredicted RBP10.96□□□□□ -0.65
VAPA-209ENST00000585042 ZNF79Q15937 498 aa10.96□□□□□ -0.65
VAPA-209ENST00000585042 STHQ8IWL8 128 aa10.96□□□□□ -0.65
VAPA-209ENST00000585042 LILRB2Q8N423 598 aa10.96□□□□□ -0.65
VAPA-209ENST00000585042 GRAMD2BQ96HH9 432 aa10.96□□□□□ -0.65
VAPA-209ENST00000585042 TP53RKQ96S44 253 aa10.96□□□□□ -0.65
VAPA-209ENST00000585042 FRAS1Q86XX4 4008 aa10.95□□□□□ -0.66
VAPA-209ENST00000585042 DEDDO75618 318 aa10.95□□□□□ -0.66
VAPA-209ENST00000585042 IFNA17P01571 189 aa10.95□□□□□ -0.66
VAPA-209ENST00000585042 APOHP02749 345 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms