RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 CASC10Q5T4H9 136 aa9.82□□□□□ -0.84
ERBB2-220ENST00000584684 CCDC190Q86UF4 302 aa9.82□□□□□ -0.84
ERBB2-220ENST00000584684 GINS3Q9BRX5 216 aa9.82□□□□□ -0.84
ERBB2-220ENST00000584684 KCNIP3Q9Y2W7 256 aa9.82□□□□□ -0.84
ERBB2-220ENST00000584684 SELENOKQ9Y6D0 94 aa9.82□□□□□ -0.84
ERBB2-220ENST00000584684 TENM2Q9NT68 2774 aa9.81□□□□□ -0.84
ERBB2-220ENST00000584684 A0A0B4J2A0 478 aa9.81□□□□□ -0.84
ERBB2-220ENST00000584684 CCDC160A6NGH7 325 aa9.81□□□□□ -0.84
ERBB2-220ENST00000584684 OR4C46A6NHA9 309 aa9.81□□□□□ -0.84
ERBB2-220ENST00000584684 IGHV3-48P01763 117 aa9.81□□□□□ -0.84
ERBB2-220ENST00000584684 CD5P06127 495 aa9.81□□□□□ -0.84
ERBB2-220ENST00000584684 BMI1P35226 326 aa9.81□□□□□ -0.84
ERBB2-220ENST00000584684 NMSQ5H8A3 153 aa9.81□□□□□ -0.84
ERBB2-220ENST00000584684 ZNF600Q6ZNG1 722 aa9.81□□□□□ -0.84
ERBB2-220ENST00000584684 TMEM116Q8NCL8 245 aa9.81□□□□□ -0.84
ERBB2-220ENST00000584684 OR4X1Q8NH49 305 aa9.81□□□□□ -0.84
ERBB2-220ENST00000584684 GPR146Q96CH1 333 aa9.81□□□□□ -0.84
ERBB2-220ENST00000584684 GGTLC1Q9BX51 225 aa9.81□□□□□ -0.84
ERBB2-220ENST00000584684 FNDC4Q9H6D8 234 aaPredicted RBP9.81□□□□□ -0.84
ERBB2-220ENST00000584684 SHPKQ9UHJ6 478 aa9.81□□□□□ -0.84
ERBB2-220ENST00000584684 IGHV3OR16-8A0A075B7F1 116 aa9.8□□□□□ -0.84
ERBB2-220ENST00000584684 CHEK1O14757 476 aa9.8□□□□□ -0.84
ERBB2-220ENST00000584684 SCGB2A1O75556 95 aa9.8□□□□□ -0.84
ERBB2-220ENST00000584684 YIF1AO95070 293 aa9.8□□□□□ -0.84
ERBB2-220ENST00000584684 SULT1A3P0DMM9 295 aa9.8□□□□□ -0.84
ERBB2-220ENST00000584684 SULT1A4P0DMN0 295 aa9.8□□□□□ -0.84
ERBB2-220ENST00000584684 ANXA3P12429 323 aa9.8□□□□□ -0.84
ERBB2-220ENST00000584684 LYL1P12980 280 aa9.8□□□□□ -0.84
ERBB2-220ENST00000584684 OPRK1P41145 380 aa9.8□□□□□ -0.84
ERBB2-220ENST00000584684 ODF3L2Q3SX64 289 aa9.8□□□□□ -0.84
ERBB2-220ENST00000584684 C2orf83Q53S99 150 aa9.8□□□□□ -0.84
ERBB2-220ENST00000584684 PYDC2Q56P42 97 aa9.8□□□□□ -0.84
ERBB2-220ENST00000584684 TOMM20LQ6UXN7 152 aa9.8□□□□□ -0.84
ERBB2-220ENST00000584684 TOMM5Q8N4H5 51 aa9.8□□□□□ -0.84
ERBB2-220ENST00000584684 SLC24A4Q8NFF2 622 aa9.8□□□□□ -0.84
ERBB2-220ENST00000584684 RNASEH2CQ8TDP1 164 aaKnown RBP9.8□□□□□ -0.84
ERBB2-220ENST00000584684 RNF2Q99496 336 aa9.8□□□□□ -0.84
ERBB2-220ENST00000584684 RHPN1-AS1Q9BWJ2 59 aa9.8□□□□□ -0.84
ERBB2-220ENST00000584684 ZFAND3Q9H8U3 227 aa9.8□□□□□ -0.84
ERBB2-220ENST00000584684 LOC102724200A0A096LPH7 203 aaPredicted RBP9.79□□□□□ -0.84
ERBB2-220ENST00000584684 TRAV14DV4A0A0A6YYC5 116 aa9.79□□□□□ -0.84
ERBB2-220ENST00000584684 DUXBA0A1W2PPF3 345 aa9.79□□□□□ -0.84
ERBB2-220ENST00000584684 RPS10-NUDT3A0A1W2PQS6 291 aa9.79□□□□□ -0.84
ERBB2-220ENST00000584684 ZNF207O43670 478 aaKnown RBP9.79□□□□□ -0.84
ERBB2-220ENST00000584684 CLN5O75503 358 aa9.79□□□□□ -0.84
ERBB2-220ENST00000584684 TMEM50AO95807 157 aa9.79□□□□□ -0.84
ERBB2-220ENST00000584684 AKR1C4P17516 323 aa9.79□□□□□ -0.84
ERBB2-220ENST00000584684 CCR6P51684 374 aa9.79□□□□□ -0.84
ERBB2-220ENST00000584684 TMEM128Q5BJH2 165 aa9.79□□□□□ -0.84
ERBB2-220ENST00000584684 FAM90A2PQ658T7 463 aa9.79□□□□□ -0.84
ERBB2-220ENST00000584684 LGI3Q8N145 548 aa9.79□□□□□ -0.84
ERBB2-220ENST00000584684 SLC25A21Q9BQT8 299 aaPredicted RBP9.79□□□□□ -0.84
ERBB2-220ENST00000584684 VSIRQ9H7M9 311 aa9.79□□□□□ -0.84
ERBB2-220ENST00000584684 RETNQ9HD89 108 aa9.79□□□□□ -0.84
ERBB2-220ENST00000584684 HEYLQ9NQ87 328 aaPredicted RBP9.79□□□□□ -0.84
ERBB2-220ENST00000584684 HSPB7Q9UBY9 170 aa9.79□□□□□ -0.84
ERBB2-220ENST00000584684 STARD9Q9P2P6 4700 aa9.78□□□□□ -0.84
ERBB2-220ENST00000584684 DYNC2H1Q8NCM8 4307 aaKnown RBP9.78□□□□□ -0.84
ERBB2-220ENST00000584684 TRAV30A0A087WSZ9 112 aa9.78□□□□□ -0.84
ERBB2-220ENST00000584684 SLC25A4P12235 298 aa9.78□□□□□ -0.84
ERBB2-220ENST00000584684 TNFRSF9Q07011 255 aa9.78□□□□□ -0.84
ERBB2-220ENST00000584684 SMCO1Q147U7 214 aa9.78□□□□□ -0.84
ERBB2-220ENST00000584684 SPANXN2Q5MJ10 180 aa9.78□□□□□ -0.84
ERBB2-220ENST00000584684 NOXA1Q86UR1 476 aa9.78□□□□□ -0.84
ERBB2-220ENST00000584684 LRTM2Q8N967 370 aa9.78□□□□□ -0.84
ERBB2-220ENST00000584684 TMEM170AQ8WVE7 144 aa9.78□□□□□ -0.84
ERBB2-220ENST00000584684 MRPL36Q9P0J6 103 aaKnown RBP9.78□□□□□ -0.84
ERBB2-220ENST00000584684 PUS1Q9Y606 427 aaKnown RBP eCLIP9.78□□□□□ -0.84
ERBB2-220ENST00000584684 TRAV2A0A0B4J234 112 aa9.77□□□□□ -0.85
ERBB2-220ENST00000584684 KIR2DL5BA0A0G2JN68 375 aa9.77□□□□□ -0.85
ERBB2-220ENST00000584684 KIR2DL5BA0A0G2JPC4 375 aa9.77□□□□□ -0.85
ERBB2-220ENST00000584684 A0A1B0GU03 582 aa9.77□□□□□ -0.85
ERBB2-220ENST00000584684 CEBPZOSA8MTT3 80 aa9.77□□□□□ -0.85
ERBB2-220ENST00000584684 IGKV1-17P01599 117 aa9.77□□□□□ -0.85
ERBB2-220ENST00000584684 NPY1RP25929 384 aa9.77□□□□□ -0.85
ERBB2-220ENST00000584684 ATP5IP56385 69 aaPredicted RBP9.77□□□□□ -0.85
ERBB2-220ENST00000584684 LYZL2Q7Z4W2 148 aa9.77□□□□□ -0.85
ERBB2-220ENST00000584684 KIR2DL5AQ8N109 375 aa9.77□□□□□ -0.85
ERBB2-220ENST00000584684 KIR2DL5BQ8NHK3 375 aa9.77□□□□□ -0.85
ERBB2-220ENST00000584684 SRRQ9GZT4 340 aa9.77□□□□□ -0.85
ERBB2-220ENST00000584684 TMEM231Q9H6L2 316 aa9.77□□□□□ -0.85
ERBB2-220ENST00000584684 PRR13Q9NZ81 148 aa9.77□□□□□ -0.85
ERBB2-220ENST00000584684 TP53TG1Q9Y2A0 90 aa9.77□□□□□ -0.85
ERBB2-220ENST00000584684 IGLC1P0CG04 106 aa9.76□□□□□ -0.85
ERBB2-220ENST00000584684 SLC25A6P12236 298 aa9.76□□□□□ -0.85
ERBB2-220ENST00000584684 APOC4P55056 127 aa9.76□□□□□ -0.85
ERBB2-220ENST00000584684 CMC4P56277 68 aaPredicted RBP9.76□□□□□ -0.85
ERBB2-220ENST00000584684 ETFRF1Q6IPR1 90 aa9.76□□□□□ -0.85
ERBB2-220ENST00000584684 PRSS54Q6PEW0 395 aa9.76□□□□□ -0.85
ERBB2-220ENST00000584684 Q6ZWC4 215 aa9.76□□□□□ -0.85
ERBB2-220ENST00000584684 OR1S2Q8NGQ3 325 aa9.76□□□□□ -0.85
ERBB2-220ENST00000584684 ST8SIA2Q92186 375 aa9.76□□□□□ -0.85
ERBB2-220ENST00000584684 U3KQ87 197 aa9.76□□□□□ -0.85
ERBB2-220ENST00000584684 IGHV3-49A0A0A0MS15 119 aa9.75□□□□□ -0.85
ERBB2-220ENST00000584684 UBE2CO00762 179 aa9.75□□□□□ -0.85
ERBB2-220ENST00000584684 PITX3O75364 302 aa9.75□□□□□ -0.85
ERBB2-220ENST00000584684 CRYBB3P26998 211 aa9.75□□□□□ -0.85
ERBB2-220ENST00000584684 RND2P52198 227 aa9.75□□□□□ -0.85
ERBB2-220ENST00000584684 UBE2MP61081 183 aaKnown RBP9.75□□□□□ -0.85
ERBB2-220ENST00000584684 YPEL3P61236 119 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms