RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 SPANXN2Q5MJ10 180 aa7.41□□□□□ -1.22
SKA2-208ENST00000583927 TMEM268Q5VZI3 342 aa7.41□□□□□ -1.22
SKA2-208ENST00000583927 RBPMS2Q6ZRY4 209 aaKnown RBP7.41□□□□□ -1.22
SKA2-208ENST00000583927 UBAC2Q8NBM4 344 aa7.41□□□□□ -1.22
SKA2-208ENST00000583927 DUSP18Q8NEJ0 188 aa7.41□□□□□ -1.22
SKA2-208ENST00000583927 OR4X1Q8NH49 305 aa7.41□□□□□ -1.22
SKA2-208ENST00000583927 RNASE11Q8TAA1 199 aaKnown RBP7.41□□□□□ -1.22
SKA2-208ENST00000583927 GPR146Q96CH1 333 aa7.41□□□□□ -1.22
SKA2-208ENST00000583927 ENY2Q9NPA8 101 aa7.41□□□□□ -1.22
SKA2-208ENST00000583927 MCUBQ9NWR8 336 aa7.41□□□□□ -1.22
SKA2-208ENST00000583927 NDUFA13Q9P0J0 144 aa7.41□□□□□ -1.22
SKA2-208ENST00000583927 SMPXQ9UHP9 88 aa7.41□□□□□ -1.22
SKA2-208ENST00000583927 DYNC2H1Q8NCM8 4307 aaKnown RBP7.41□□□□□ -1.22
SKA2-208ENST00000583927 IGHV7-4-1A0A0J9YVY3 117 aa7.4□□□□□ -1.22
SKA2-208ENST00000583927 GNG7O60262 68 aa7.4□□□□□ -1.22
SKA2-208ENST00000583927 TMEM50AO95807 157 aa7.4□□□□□ -1.22
SKA2-208ENST00000583927 SULT1A3P0DMM9 295 aa7.4□□□□□ -1.22
SKA2-208ENST00000583927 SULT1A4P0DMN0 295 aa7.4□□□□□ -1.22
SKA2-208ENST00000583927 HOXA1P49639 335 aaPredicted RBP7.4□□□□□ -1.22
SKA2-208ENST00000583927 CCR6P51684 374 aa7.4□□□□□ -1.22
SKA2-208ENST00000583927 ATP5IP56385 69 aaPredicted RBP7.4□□□□□ -1.22
SKA2-208ENST00000583927 ZNF600Q6ZNG1 722 aa7.4□□□□□ -1.22
SKA2-208ENST00000583927 NOXA1Q86UR1 476 aa7.4□□□□□ -1.22
SKA2-208ENST00000583927 LGI3Q8N145 548 aa7.4□□□□□ -1.22
SKA2-208ENST00000583927 DEFB125Q8N687 156 aa7.4□□□□□ -1.22
SKA2-208ENST00000583927 LRTM2Q8N967 370 aa7.4□□□□□ -1.22
SKA2-208ENST00000583927 OR52B4Q8NGK2 314 aa7.4□□□□□ -1.22
SKA2-208ENST00000583927 RNASEH2CQ8TDP1 164 aaKnown RBP7.4□□□□□ -1.22
SKA2-208ENST00000583927 PINX1Q96BK5 328 aaKnown RBP7.4□□□□□ -1.22
SKA2-208ENST00000583927 GINS3Q9BRX5 216 aa7.4□□□□□ -1.22
SKA2-208ENST00000583927 HSPB7Q9UBY9 170 aa7.4□□□□□ -1.22
SKA2-208ENST00000583927 CACNG5Q9UF02 275 aa7.4□□□□□ -1.22
SKA2-208ENST00000583927 TRAV30A0A087WSZ9 112 aa7.39□□□□□ -1.23
SKA2-208ENST00000583927 TRAV14DV4A0A0A6YYC5 116 aa7.39□□□□□ -1.23
SKA2-208ENST00000583927 RBMY1BA6NDE4 496 aaKnown RBP7.39□□□□□ -1.23
SKA2-208ENST00000583927 RBMY1EA6NEQ0 496 aaKnown RBP7.39□□□□□ -1.23
SKA2-208ENST00000583927 CHEK1O14757 476 aa7.39□□□□□ -1.23
SKA2-208ENST00000583927 CLN5O75503 358 aa7.39□□□□□ -1.23
SKA2-208ENST00000583927 SCGB2A1O75556 95 aa7.39□□□□□ -1.23
SKA2-208ENST00000583927 SCAF4O95104 1147 aaKnown RBP7.39□□□□□ -1.23
SKA2-208ENST00000583927 RBMY1DP0C7P1 496 aaKnown RBP7.39□□□□□ -1.23
SKA2-208ENST00000583927 SLC25A4P12235 298 aa7.39□□□□□ -1.23
SKA2-208ENST00000583927 SLC25A6P12236 298 aa7.39□□□□□ -1.23
SKA2-208ENST00000583927 BMI1P35226 326 aa7.39□□□□□ -1.23
SKA2-208ENST00000583927 UBE2MP61081 183 aaKnown RBP7.39□□□□□ -1.23
SKA2-208ENST00000583927 SMCO1Q147U7 214 aa7.39□□□□□ -1.23
SKA2-208ENST00000583927 SPINK9Q5DT21 86 aa7.39□□□□□ -1.23
SKA2-208ENST00000583927 TMEM116Q8NCL8 245 aa7.39□□□□□ -1.23
SKA2-208ENST00000583927 MUC7Q8TAX7 377 aa7.39□□□□□ -1.23
SKA2-208ENST00000583927 SRRQ9GZT4 340 aa7.39□□□□□ -1.23
SKA2-208ENST00000583927 HIPK2Q9H2X6 1198 aa7.39□□□□□ -1.23
SKA2-208ENST00000583927 FNDC4Q9H6D8 234 aaPredicted RBP7.39□□□□□ -1.23
SKA2-208ENST00000583927 SRD5A3Q9H8P0 318 aa7.39□□□□□ -1.23
SKA2-208ENST00000583927 ZFAND3Q9H8U3 227 aa7.39□□□□□ -1.23
SKA2-208ENST00000583927 EDA2RQ9HAV5 297 aa7.39□□□□□ -1.23
SKA2-208ENST00000583927 U3KQ87 197 aa7.39□□□□□ -1.23
SKA2-208ENST00000583927 A0A1B0GU03 582 aa7.38□□□□□ -1.23
SKA2-208ENST00000583927 RPS10-NUDT3A0A1W2PQS6 291 aa7.38□□□□□ -1.23
SKA2-208ENST00000583927 NAP1L6A6NFF2 107 aa7.38□□□□□ -1.23
SKA2-208ENST00000583927 OR4C46A6NHA9 309 aa7.38□□□□□ -1.23
SKA2-208ENST00000583927 AKR1C4P17516 323 aa7.38□□□□□ -1.23
SKA2-208ENST00000583927 OPRK1P41145 380 aa7.38□□□□□ -1.23
SKA2-208ENST00000583927 CMC4P56277 68 aaPredicted RBP7.38□□□□□ -1.23
SKA2-208ENST00000583927 TNFRSF9Q07011 255 aa7.38□□□□□ -1.23
SKA2-208ENST00000583927 RBMS2Q15434 407 aaKnown RBP7.38□□□□□ -1.23
SKA2-208ENST00000583927 FAM90A2PQ658T7 463 aa7.38□□□□□ -1.23
SKA2-208ENST00000583927 ETFRF1Q6IPR1 90 aa7.38□□□□□ -1.23
SKA2-208ENST00000583927 TOMM20LQ6UXN7 152 aa7.38□□□□□ -1.23
SKA2-208ENST00000583927 LYZL2Q7Z4W2 148 aa7.38□□□□□ -1.23
SKA2-208ENST00000583927 C20orf24Q9BUV8 137 aa7.38□□□□□ -1.23
SKA2-208ENST00000583927 RHPN1-AS1Q9BWJ2 59 aa7.38□□□□□ -1.23
SKA2-208ENST00000583927 WFDC10AQ9H1F0 79 aa7.38□□□□□ -1.23
SKA2-208ENST00000583927 VSIRQ9H7M9 311 aa7.38□□□□□ -1.23
SKA2-208ENST00000583927 HEYLQ9NQ87 328 aaPredicted RBP7.38□□□□□ -1.23
SKA2-208ENST00000583927 AGRNO00468 2067 aa7.37□□□□□ -1.23
SKA2-208ENST00000583927 TRAV2A0A0B4J234 112 aa7.37□□□□□ -1.23
SKA2-208ENST00000583927 FAM90A26D6RGX4 464 aa7.37□□□□□ -1.23
SKA2-208ENST00000583927 PITX3O75364 302 aa7.37□□□□□ -1.23
SKA2-208ENST00000583927 YIF1AO95070 293 aa7.37□□□□□ -1.23
SKA2-208ENST00000583927 IGKV1-17P01599 117 aa7.37□□□□□ -1.23
SKA2-208ENST00000583927 IGHV3-48P01763 117 aa7.37□□□□□ -1.23
SKA2-208ENST00000583927 CNPY1Q3B7I2 92 aa7.37□□□□□ -1.23
SKA2-208ENST00000583927 SLC24A4Q8NFF2 622 aa7.37□□□□□ -1.23
SKA2-208ENST00000583927 TMEM170AQ8WVE7 144 aa7.37□□□□□ -1.23
SKA2-208ENST00000583927 RNF2Q99496 336 aa7.37□□□□□ -1.23
SKA2-208ENST00000583927 C7orf50Q9BRJ6 194 aaKnown RBP7.37□□□□□ -1.23
SKA2-208ENST00000583927 TMED3Q9Y3Q3 217 aa7.37□□□□□ -1.23
SKA2-208ENST00000583927 PUS1Q9Y606 427 aaKnown RBP eCLIP7.37□□□□□ -1.23
SKA2-208ENST00000583927 SACSQ9NZJ4 4579 aa7.37□□□□□ -1.23
SKA2-208ENST00000583927 IGHV3OR16-8A0A075B7F1 116 aa7.36□□□□□ -1.23
SKA2-208ENST00000583927 LOC102724200A0A096LPH7 203 aaPredicted RBP7.36□□□□□ -1.23
SKA2-208ENST00000583927 KIR2DL5BA0A0G2JN68 375 aa7.36□□□□□ -1.23
SKA2-208ENST00000583927 KIR2DL5BA0A0G2JPC4 375 aa7.36□□□□□ -1.23
SKA2-208ENST00000583927 A0A1B0GVG6 124 aa7.36□□□□□ -1.23
SKA2-208ENST00000583927 CEBPZOSA8MTT3 80 aa7.36□□□□□ -1.23
SKA2-208ENST00000583927 ZNF207O43670 478 aaKnown RBP7.36□□□□□ -1.23
SKA2-208ENST00000583927 NPY1RP25929 384 aa7.36□□□□□ -1.23
SKA2-208ENST00000583927 CRYBB3P26998 211 aa7.36□□□□□ -1.23
SKA2-208ENST00000583927 YPEL3P61236 119 aaPredicted RBP7.36□□□□□ -1.23
SKA2-208ENST00000583927 ODF3L2Q3SX64 289 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms