RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 OR2B8PP59922 312 aa3.89□□□□□ -1.79
VAPA-207ENST00000583879 RPL8P62917 257 aaKnown RBP3.89□□□□□ -1.79
VAPA-207ENST00000583879 PLA2G7Q13093 441 aa3.89□□□□□ -1.79
VAPA-207ENST00000583879 EIF4EBP1Q13541 118 aaPredicted RBP3.89□□□□□ -1.79
VAPA-207ENST00000583879 SSX9Q7RTT3 188 aa3.89□□□□□ -1.79
VAPA-207ENST00000583879 OR4S2Q8NH73 311 aa3.89□□□□□ -1.79
VAPA-207ENST00000583879 OR4A5Q8NH83 315 aa3.89□□□□□ -1.79
VAPA-207ENST00000583879 VN1R17PQ8TDU5 208 aa3.89□□□□□ -1.79
VAPA-207ENST00000583879 TMEM190Q8WZ59 177 aa3.89□□□□□ -1.79
VAPA-207ENST00000583879 BSCL2Q96G97 398 aaPredicted RBP3.89□□□□□ -1.79
VAPA-207ENST00000583879 CHRDL1Q9BU40 450 aa3.89□□□□□ -1.79
VAPA-207ENST00000583879 MND1Q9BWT6 205 aa3.89□□□□□ -1.79
VAPA-207ENST00000583879 MAGT1Q9H0U3 335 aa3.89□□□□□ -1.79
VAPA-207ENST00000583879 TMEM231Q9H6L2 316 aa3.89□□□□□ -1.79
VAPA-207ENST00000583879 DAZ1Q9NQZ3 744 aaKnown RBP3.89□□□□□ -1.79
VAPA-207ENST00000583879 C11orf21Q9P2W6 132 aa3.89□□□□□ -1.79
VAPA-207ENST00000583879 TNFRSF18Q9Y5U5 241 aa3.89□□□□□ -1.79
VAPA-207ENST00000583879 V9GY05 133 aa3.89□□□□□ -1.79
VAPA-207ENST00000583879 VPS13DQ5THJ4 4388 aa3.89□□□□□ -1.79
VAPA-207ENST00000583879 IGKV1D-13A0A0B4J2D9 117 aa3.88□□□□□ -1.79
VAPA-207ENST00000583879 LOC102723971A0A1B0GUV8 181 aa3.88□□□□□ -1.79
VAPA-207ENST00000583879 RAB19A4D1S5 217 aa3.88□□□□□ -1.79
VAPA-207ENST00000583879 METTL21EPA6NDL7 271 aa3.88□□□□□ -1.79
VAPA-207ENST00000583879 OR2T8A6NH00 312 aa3.88□□□□□ -1.79
VAPA-207ENST00000583879 C15orf62A8K5M9 175 aa3.88□□□□□ -1.79
VAPA-207ENST00000583879 NDUFA4O00483 81 aa3.88□□□□□ -1.79
VAPA-207ENST00000583879 DEFB4AO15263 64 aa3.88□□□□□ -1.79
VAPA-207ENST00000583879 CYB5BO43169 146 aa3.88□□□□□ -1.79
VAPA-207ENST00000583879 MRPS14O60783 128 aaKnown RBP3.88□□□□□ -1.79
VAPA-207ENST00000583879 PFDN1O60925 122 aa3.88□□□□□ -1.79
VAPA-207ENST00000583879 IGKV1-13P0DP09 117 aa3.88□□□□□ -1.79
VAPA-207ENST00000583879 HIST1H1DP16402 221 aaKnown RBP3.88□□□□□ -1.79
VAPA-207ENST00000583879 DTYMKP23919 212 aa3.88□□□□□ -1.79
VAPA-207ENST00000583879 CNN1P51911 297 aaKnown RBP3.88□□□□□ -1.79
VAPA-207ENST00000583879 TMEM187Q14656 261 aa3.88□□□□□ -1.79
VAPA-207ENST00000583879 ARL6IP1Q15041 203 aa3.88□□□□□ -1.79
VAPA-207ENST00000583879 PSG3Q16557 428 aa3.88□□□□□ -1.79
VAPA-207ENST00000583879 LIPKQ5VXJ0 399 aa3.88□□□□□ -1.79
VAPA-207ENST00000583879 SPSB3Q6PJ21 355 aa3.88□□□□□ -1.79
VAPA-207ENST00000583879 ZNF66Q6ZN08 573 aa3.88□□□□□ -1.79
VAPA-207ENST00000583879 TMEM182Q6ZP80 229 aaPredicted RBP3.88□□□□□ -1.79
VAPA-207ENST00000583879 C8orf59Q8N0T1 100 aaPredicted RBP3.88□□□□□ -1.79
VAPA-207ENST00000583879 PACRGLQ8N7B6 248 aa3.88□□□□□ -1.79
VAPA-207ENST00000583879 SCARB1Q8WTV0 552 aa3.88□□□□□ -1.79
VAPA-207ENST00000583879 TCTEX1D2Q8WW35 142 aa3.88□□□□□ -1.79
VAPA-207ENST00000583879 FCGR1BQ92637 280 aa3.88□□□□□ -1.79
VAPA-207ENST00000583879 UFD1Q92890 307 aa3.88□□□□□ -1.79
VAPA-207ENST00000583879 RNF2Q99496 336 aa3.88□□□□□ -1.79
VAPA-207ENST00000583879 C20orf24Q9BUV8 137 aa3.88□□□□□ -1.79
VAPA-207ENST00000583879 HINT2Q9BX68 163 aa3.88□□□□□ -1.79
VAPA-207ENST00000583879 COMMD5Q9GZQ3 224 aa3.88□□□□□ -1.79
VAPA-207ENST00000583879 DCSTAMPQ9H295 470 aa3.88□□□□□ -1.79
VAPA-207ENST00000583879 HRASLSQ9HDD0 168 aa3.88□□□□□ -1.79
VAPA-207ENST00000583879 BET1LQ9NYM9 111 aa3.88□□□□□ -1.79
VAPA-207ENST00000583879 TAS2R8Q9NYW2 309 aa3.88□□□□□ -1.79
VAPA-207ENST00000583879 SMPXQ9UHP9 88 aa3.88□□□□□ -1.79
VAPA-207ENST00000583879 ELF5Q9UKW6 265 aaPredicted RBP3.88□□□□□ -1.79
VAPA-207ENST00000583879 LSM2Q9Y333 95 aaKnown RBP3.88□□□□□ -1.79
VAPA-207ENST00000583879 ETV7Q9Y603 341 aa3.88□□□□□ -1.79
VAPA-207ENST00000583879 IGHV3OR16-8A0A075B7F1 116 aa3.87□□□□□ -1.79
VAPA-207ENST00000583879 TRAV3A0A0B4J244 114 aa3.87□□□□□ -1.79
VAPA-207ENST00000583879 IGLC7A0M8Q6 106 aa3.87□□□□□ -1.79
VAPA-207ENST00000583879 PRSS29PA6NIE9 313 aa3.87□□□□□ -1.79
VAPA-207ENST00000583879 IFITM5A6NNB3 132 aa3.87□□□□□ -1.79
VAPA-207ENST00000583879 C15orf61A6NNL5 157 aa3.87□□□□□ -1.79
VAPA-207ENST00000583879 UPK2O00526 184 aa3.87□□□□□ -1.79
VAPA-207ENST00000583879 CHEK1O14757 476 aa3.87□□□□□ -1.79
VAPA-207ENST00000583879 ZNF207O43670 478 aaKnown RBP3.87□□□□□ -1.79
VAPA-207ENST00000583879 SERPINE2P07093 398 aa3.87□□□□□ -1.79
VAPA-207ENST00000583879 PSMA1P25786 263 aaKnown RBP3.87□□□□□ -1.79
VAPA-207ENST00000583879 TFPI2P48307 235 aa3.87□□□□□ -1.79
VAPA-207ENST00000583879 RPS25P62851 125 aaKnown RBP3.87□□□□□ -1.79
VAPA-207ENST00000583879 FABP5Q01469 135 aa3.87□□□□□ -1.79
VAPA-207ENST00000583879 FHL2Q14192 279 aa3.87□□□□□ -1.79
VAPA-207ENST00000583879 TRAM1Q15629 374 aa3.87□□□□□ -1.79
VAPA-207ENST00000583879 VAMP3Q15836 100 aa3.87□□□□□ -1.79
VAPA-207ENST00000583879 TIMM50Q3ZCQ8 353 aa3.87□□□□□ -1.79
VAPA-207ENST00000583879 CDNFQ49AH0 187 aa3.87□□□□□ -1.79
VAPA-207ENST00000583879 FAM90A2PQ658T7 463 aa3.87□□□□□ -1.79
VAPA-207ENST00000583879 CNIH2Q6PI25 160 aa3.87□□□□□ -1.79
VAPA-207ENST00000583879 SMIM15Q7Z3B0 74 aa3.87□□□□□ -1.79
VAPA-207ENST00000583879 HSD17B13Q7Z5P4 300 aaPredicted RBP3.87□□□□□ -1.79
VAPA-207ENST00000583879 NR2C2APQ86WQ0 139 aa3.87□□□□□ -1.79
VAPA-207ENST00000583879 OR10W1Q8NGF6 305 aa3.87□□□□□ -1.79
VAPA-207ENST00000583879 GPHA2Q96T91 129 aa3.87□□□□□ -1.79
VAPA-207ENST00000583879 TSC22D3Q99576 134 aa3.87□□□□□ -1.79
VAPA-207ENST00000583879 C7orf50Q9BRJ6 194 aaKnown RBP3.87□□□□□ -1.79
VAPA-207ENST00000583879 RHPN1-AS1Q9BWJ2 59 aa3.87□□□□□ -1.79
VAPA-207ENST00000583879 SLC25A32Q9H2D1 315 aa3.87□□□□□ -1.79
VAPA-207ENST00000583879 C21orf62Q9NYP8 219 aa3.87□□□□□ -1.79
VAPA-207ENST00000583879 IGKV3-7A0A075B6H7 116 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 IGHV4-4A0A075B6R2 117 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 TRAV14DV4A0A0A6YYC5 116 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 IGHV3-21A0A0B4J1V1 117 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 TRAV10A0A0B4J240 114 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 IGHV7-4-1A0A0J9YVY3 117 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 TEX50A0A1B0GTY4 177 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 FBLL1A6NHQ2 334 aaKnown RBP3.86□□□□□ -1.79
VAPA-207ENST00000583879 MARCH11A6NNE9 402 aa3.86□□□□□ -1.79
VAPA-207ENST00000583879 M0R2N4 97 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms